RNA–Protein interactions for RNA: ENST00000536548.5

CPSF7-216, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-216ENST00000536548 GAGE12FP0CL80 117 aa5.82□□□□□ -1.48
CPSF7-216ENST00000536548 GAGE12GP0CL81 117 aa5.82□□□□□ -1.48
CPSF7-216ENST00000536548 GAGE12IP0CL82 117 aa5.82□□□□□ -1.48
CPSF7-216ENST00000536548 IFITM1P13164 125 aa5.82□□□□□ -1.48
CPSF7-216ENST00000536548 RNASE4P34096 147 aaKnown RBP5.82□□□□□ -1.48
CPSF7-216ENST00000536548 UBE2E1P51965 193 aa5.82□□□□□ -1.48
CPSF7-216ENST00000536548 HILS1P60008 231 aa5.82□□□□□ -1.48
CPSF7-216ENST00000536548 GAGE4Q13068 117 aa5.82□□□□□ -1.48
CPSF7-216ENST00000536548 Q1RN00 199 aa5.82□□□□□ -1.48
CPSF7-216ENST00000536548 LINC01620Q4KN68 170 aa5.82□□□□□ -1.48
CPSF7-216ENST00000536548 SFTA2Q6UW10 78 aa5.82□□□□□ -1.48
CPSF7-216ENST00000536548 FAM159AQ6UWV7 190 aa5.82□□□□□ -1.48
CPSF7-216ENST00000536548 TMEM263Q8WUH6 116 aaKnown RBP5.82□□□□□ -1.48
CPSF7-216ENST00000536548 WFDC12Q8WWY7 111 aa5.82□□□□□ -1.48
CPSF7-216ENST00000536548 SIRPDQ9H106 197 aa5.82□□□□□ -1.48
CPSF7-216ENST00000536548 KIF25-AS1Q9Y6Z4 181 aa5.82□□□□□ -1.48
CPSF7-216ENST00000536548 IGHV3-49A0A0A0MS15 119 aa5.81□□□□□ -1.48
CPSF7-216ENST00000536548 TRBV30A0A0K0K1B3 111 aa5.81□□□□□ -1.48
CPSF7-216ENST00000536548 TRBV27A0A0K0K1C4 114 aa5.81□□□□□ -1.48
CPSF7-216ENST00000536548 TRBV10-2A0A0K0K1G8 114 aa5.81□□□□□ -1.48
CPSF7-216ENST00000536548 TMEM223A0PJW6 202 aa5.81□□□□□ -1.48
CPSF7-216ENST00000536548 A4D1N5 150 aa5.81□□□□□ -1.48
CPSF7-216ENST00000536548 H3BMM0 161 aa5.81□□□□□ -1.48
CPSF7-216ENST00000536548 H3BT86 120 aa5.81□□□□□ -1.48
CPSF7-216ENST00000536548 LGALS9O00182 355 aa5.81□□□□□ -1.48
CPSF7-216ENST00000536548 TSHBP01222 138 aa5.81□□□□□ -1.48
CPSF7-216ENST00000536548 COX6CP09669 75 aa5.81□□□□□ -1.48
CPSF7-216ENST00000536548 CRIP2P52943 208 aaPredicted RBP5.81□□□□□ -1.48
CPSF7-216ENST00000536548 NDUFV3P56181 108 aaKnown RBP5.81□□□□□ -1.48
CPSF7-216ENST00000536548 NSUN5P1Q3KNT7 163 aa5.81□□□□□ -1.48
CPSF7-216ENST00000536548 SUMO4Q6EEV6 95 aa5.81□□□□□ -1.48
CPSF7-216ENST00000536548 UBE2WQ96B02 151 aa5.81□□□□□ -1.48
CPSF7-216ENST00000536548 C20orf173Q96LM9 149 aa5.81□□□□□ -1.48
CPSF7-216ENST00000536548 ESM1Q9NQ30 184 aa5.81□□□□□ -1.48
CPSF7-216ENST00000536548 MDFICQ9P1T7 246 aa5.81□□□□□ -1.48
CPSF7-216ENST00000536548 TRAV41A0A0B4J266 112 aa5.8□□□□□ -1.48
CPSF7-216ENST00000536548 F5H697 171 aa5.8□□□□□ -1.48
CPSF7-216ENST00000536548 H3BUA1 57 aa5.8□□□□□ -1.48
CPSF7-216ENST00000536548 J3KRW8 73 aa5.8□□□□□ -1.48
CPSF7-216ENST00000536548 SOCS3O14543 225 aa5.8□□□□□ -1.48
CPSF7-216ENST00000536548 BRI3O95415 125 aa5.8□□□□□ -1.48
CPSF7-216ENST00000536548 PRB2P02812 416 aaPredicted RBP5.8□□□□□ -1.48
CPSF7-216ENST00000536548 RNASE3P12724 160 aaKnown RBP5.8□□□□□ -1.48
CPSF7-216ENST00000536548 ID1P41134 155 aa5.8□□□□□ -1.48
CPSF7-216ENST00000536548 TSPEAR-AS2P59090 65 aa5.8□□□□□ -1.48
CPSF7-216ENST00000536548 LINC00315P59091 139 aa5.8□□□□□ -1.48
CPSF7-216ENST00000536548 Q6ZS46 218 aa5.8□□□□□ -1.48
CPSF7-216ENST00000536548 TRPT1Q86TN4 253 aaKnown RBP5.8□□□□□ -1.48
CPSF7-216ENST00000536548 NTN5Q8WTR8 489 aaPredicted RBP5.8□□□□□ -1.48
CPSF7-216ENST00000536548 AJUBAQ96IF1 538 aa5.8□□□□□ -1.48
CPSF7-216ENST00000536548 USMG5Q96IX5 58 aa5.8□□□□□ -1.48
CPSF7-216ENST00000536548 AMELXQ99217 191 aa5.8□□□□□ -1.48
CPSF7-216ENST00000536548 ARFGEF3Q5TH69 2177 aa5.79□□□□□ -1.48
CPSF7-216ENST00000536548 TRAV2A0A0B4J234 112 aa5.79□□□□□ -1.48
CPSF7-216ENST00000536548 GNRH2O43555 120 aa5.79□□□□□ -1.48
CPSF7-216ENST00000536548 Q8N1Y9 231 aa5.79□□□□□ -1.48
CPSF7-216ENST00000536548 C5orf56Q8N8D9 126 aa5.79□□□□□ -1.48
CPSF7-216ENST00000536548 RAX2Q96IS3 184 aa5.79□□□□□ -1.48
CPSF7-216ENST00000536548 ODF3Q96PU9 254 aa5.79□□□□□ -1.48
CPSF7-216ENST00000536548 PIMREGQ9BSJ6 248 aa5.79□□□□□ -1.48
CPSF7-216ENST00000536548 BPESC1Q9GZL8 116 aa5.79□□□□□ -1.48
CPSF7-216ENST00000536548 SS18L2Q9UHA2 77 aa5.79□□□□□ -1.48
CPSF7-216ENST00000536548 MOB4Q9Y3A3 225 aa5.79□□□□□ -1.48
CPSF7-216ENST00000536548 DNAH1Q9P2D7 4330 aa5.79□□□□□ -1.48
CPSF7-216ENST00000536548 PCLOQ9Y6V0 5065 aa5.78□□□□□ -1.48
CPSF7-216ENST00000536548 FAM240AA0A1B0GVK7 77 aa5.78□□□□□ -1.48
CPSF7-216ENST00000536548 KLLNB2CW77 178 aa5.78□□□□□ -1.48
CPSF7-216ENST00000536548 B5MCH6 92 aa5.78□□□□□ -1.48
CPSF7-216ENST00000536548 G3V318 75 aa5.78□□□□□ -1.48
CPSF7-216ENST00000536548 IGF1P05019 195 aa5.78□□□□□ -1.48
CPSF7-216ENST00000536548 EMP1P54849 157 aa5.78□□□□□ -1.48
CPSF7-216ENST00000536548 C2orf82Q6UX34 121 aa5.78□□□□□ -1.48
CPSF7-216ENST00000536548 Q6ZQT7 251 aa5.78□□□□□ -1.48
CPSF7-216ENST00000536548 MUSTN1Q8IVN3 82 aa5.78□□□□□ -1.48
CPSF7-216ENST00000536548 LINC01356Q8N9X3 169 aa5.78□□□□□ -1.48
CPSF7-216ENST00000536548 ZNRF2Q8NHG8 242 aa5.78□□□□□ -1.48
CPSF7-216ENST00000536548 SPANXCQ9NY87 97 aa5.78□□□□□ -1.48
CPSF7-216ENST00000536548 DNAH3Q8TD57 4116 aa5.77□□□□□ -1.49
CPSF7-216ENST00000536548 NPFFO15130 113 aa5.77□□□□□ -1.49
CPSF7-216ENST00000536548 ZNF22P17026 224 aaPredicted RBP5.77□□□□□ -1.49
CPSF7-216ENST00000536548 SAA4P35542 130 aa5.77□□□□□ -1.49
CPSF7-216ENST00000536548 RPL39P62891 51 aaKnown RBP5.77□□□□□ -1.49
CPSF7-216ENST00000536548 C19orf54Q5BKX5 351 aa5.77□□□□□ -1.49
CPSF7-216ENST00000536548 C15orf53Q8NAA6 179 aa5.77□□□□□ -1.49
CPSF7-216ENST00000536548 DUX5Q96PT3 197 aa5.77□□□□□ -1.49
CPSF7-216ENST00000536548 FAM110AQ9BQ89 295 aa5.77□□□□□ -1.49
CPSF7-216ENST00000536548 RYR1P21817 5038 aa5.76□□□□□ -1.49
CPSF7-216ENST00000536548 TRAV4A0A0B4J268 109 aa5.76□□□□□ -1.49
CPSF7-216ENST00000536548 A0A0J9YXY3 114 aa5.76□□□□□ -1.49
CPSF7-216ENST00000536548 LINC01548A6NM66 108 aa5.76□□□□□ -1.49
CPSF7-216ENST00000536548 H7C2G1 150 aa5.76□□□□□ -1.49
CPSF7-216ENST00000536548 I3L3M4 83 aa5.76□□□□□ -1.49
CPSF7-216ENST00000536548 ACYP1P07311 99 aa5.76□□□□□ -1.49
CPSF7-216ENST00000536548 NHLRC4P0CG21 123 aaPredicted RBP5.76□□□□□ -1.49
CPSF7-216ENST00000536548 GATA3P23771 443 aa5.76□□□□□ -1.49
CPSF7-216ENST00000536548 RPL11P62913 178 aaKnown RBP5.76□□□□□ -1.49
CPSF7-216ENST00000536548 ZNF56Q15929 161 aa5.76□□□□□ -1.49
CPSF7-216ENST00000536548 DEFB121Q5J5C9 76 aa5.76□□□□□ -1.49
CPSF7-216ENST00000536548 C20orf203Q8NBC4 194 aa5.76□□□□□ -1.49
CPSF7-216ENST00000536548 C9orf85Q96MD7 179 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms