RNA–Protein interactions for RNA: ENST00000535544.1

LINC00943-203, long intergenic non-protein coding RNA 943, humanhuman

TSL 2 BASIC

Gene LINC00943, Length 2,815 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00943-203ENST00000535544 CST9LQ9H4G1 147 aa6.56□□□□□ -1.36
LINC00943-203ENST00000535544 TRBV25-1A0A075B6N4 114 aa6.56□□□□□ -1.36
LINC00943-203ENST00000535544 A8MWV9 139 aa6.56□□□□□ -1.36
LINC00943-203ENST00000535544 PPP1R17O96001 155 aa6.56□□□□□ -1.36
LINC00943-203ENST00000535544 C20orf203Q8NBC4 194 aa6.56□□□□□ -1.36
LINC00943-203ENST00000535544 MGAM2Q2M2H8 2515 aa6.56□□□□□ -1.36
LINC00943-203ENST00000535544 TRAV12-1A0A0B4J245 112 aa6.55□□□□□ -1.36
LINC00943-203ENST00000535544 TAX1BP3O14907 124 aa6.55□□□□□ -1.36
LINC00943-203ENST00000535544 IL17DQ8TAD2 202 aa6.55□□□□□ -1.36
LINC00943-203ENST00000535544 TNFRSF18Q9Y5U5 241 aa6.55□□□□□ -1.36
LINC00943-203ENST00000535544 DNAH3Q8TD57 4116 aa6.55□□□□□ -1.36
LINC00943-203ENST00000535544 RS1O15537 224 aa6.55□□□□□ -1.36
LINC00943-203ENST00000535544 RPL32P62910 135 aaKnown RBP6.55□□□□□ -1.36
LINC00943-203ENST00000535544 TMEM97Q5BJF2 176 aa6.55□□□□□ -1.36
LINC00943-203ENST00000535544 OR4C5Q8NGB2 326 aa6.55□□□□□ -1.36
LINC00943-203ENST00000535544 TSPEAR-AS2P59090 65 aa6.54□□□□□ -1.36
LINC00943-203ENST00000535544 SLC25A29Q8N8R3 303 aa6.54□□□□□ -1.36
LINC00943-203ENST00000535544 PLEKHB2Q96CS7 222 aa6.54□□□□□ -1.36
LINC00943-203ENST00000535544 LINC00467Q9BRT7 94 aa6.54□□□□□ -1.36
LINC00943-203ENST00000535544 CHCHD7Q9BUK0 85 aa6.54□□□□□ -1.36
LINC00943-203ENST00000535544 A0A0J9YXV3 536 aa6.54□□□□□ -1.36
LINC00943-203ENST00000535544 LINC00694P0DN24 101 aa6.54□□□□□ -1.36
LINC00943-203ENST00000535544 FXYD2P54710 66 aa6.54□□□□□ -1.36
LINC00943-203ENST00000535544 RAB37Q96AX2 223 aa6.54□□□□□ -1.36
LINC00943-203ENST00000535544 IGLV4-3A0A075B6K6 122 aa6.54□□□□□ -1.36
LINC00943-203ENST00000535544 A8MZ25 164 aa6.54□□□□□ -1.36
LINC00943-203ENST00000535544 PMVKQ15126 192 aa6.54□□□□□ -1.36
LINC00943-203ENST00000535544 TMEM263Q8WUH6 116 aaKnown RBP6.54□□□□□ -1.36
LINC00943-203ENST00000535544 CLUHP3Q96NS8 147 aa6.54□□□□□ -1.36
LINC00943-203ENST00000535544 GAGE12JA6NER3 117 aa6.53□□□□□ -1.36
LINC00943-203ENST00000535544 K7ERJ3 54 aa6.53□□□□□ -1.36
LINC00943-203ENST00000535544 GAGE1Q13065 139 aa6.53□□□□□ -1.36
LINC00943-203ENST00000535544 GAGE4Q13068 117 aa6.53□□□□□ -1.36
LINC00943-203ENST00000535544 GAGE5Q13069 117 aa6.53□□□□□ -1.36
LINC00943-203ENST00000535544 GAGE13Q4V321 117 aa6.53□□□□□ -1.36
LINC00943-203ENST00000535544 TMEM170BQ5T4T1 132 aa6.53□□□□□ -1.36
LINC00943-203ENST00000535544 NTM-AS1Q6ZSK4 140 aa6.53□□□□□ -1.36
LINC00943-203ENST00000535544 PRADC1Q9BSG0 188 aa6.53□□□□□ -1.36
LINC00943-203ENST00000535544 SPXQ9BT56 116 aa6.53□□□□□ -1.36
LINC00943-203ENST00000535544 DEFB130BP0DP73 79 aa6.53□□□□□ -1.36
LINC00943-203ENST00000535544 DEFB130AP0DP74 79 aa6.53□□□□□ -1.36
LINC00943-203ENST00000535544 MRPL52Q86TS9 123 aaKnown RBP6.53□□□□□ -1.36
LINC00943-203ENST00000535544 CITED1Q99966 193 aa6.53□□□□□ -1.36
LINC00943-203ENST00000535544 LYSTQ99698 3801 aa6.52□□□□□ -1.36
LINC00943-203ENST00000535544 GCSHP23434 173 aa6.52□□□□□ -1.37
LINC00943-203ENST00000535544 PLNP26678 52 aa6.52□□□□□ -1.37
LINC00943-203ENST00000535544 COX11Q9Y6N1 276 aa6.52□□□□□ -1.37
LINC00943-203ENST00000535544 TRGV2A0A075B6R0 118 aa6.52□□□□□ -1.37
LINC00943-203ENST00000535544 DLEU1O43261 78 aa6.52□□□□□ -1.37
LINC00943-203ENST00000535544 TIMM17AQ99595 171 aa6.52□□□□□ -1.37
LINC00943-203ENST00000535544 CHAC1Q9BUX1 264 aa6.52□□□□□ -1.37
LINC00943-203ENST00000535544 CCL25O15444 150 aa6.51□□□□□ -1.37
LINC00943-203ENST00000535544 C12orf54Q6X4T0 127 aa6.51□□□□□ -1.37
LINC00943-203ENST00000535544 RRN3P1Q2M238 152 aa6.51□□□□□ -1.37
LINC00943-203ENST00000535544 OXLD1Q5BKU9 147 aa6.51□□□□□ -1.37
LINC00943-203ENST00000535544 Q6ZUT4 128 aa6.51□□□□□ -1.37
LINC00943-203ENST00000535544 TRAV8-3A0A0A6YYJ7 113 aa6.5□□□□□ -1.37
LINC00943-203ENST00000535544 DEFB135Q30KP9 77 aa6.5□□□□□ -1.37
LINC00943-203ENST00000535544 UBE2D4Q9Y2X8 147 aa6.5□□□□□ -1.37
LINC00943-203ENST00000535544 RHOHQ15669 191 aa6.5□□□□□ -1.37
LINC00943-203ENST00000535544 ORAOV1Q8WV07 137 aa6.5□□□□□ -1.37
LINC00943-203ENST00000535544 TRBV7-3A0A075B6L6 115 aa6.49□□□□□ -1.37
LINC00943-203ENST00000535544 AMMECR1LQ6DCA0 310 aa6.49□□□□□ -1.37
LINC00943-203ENST00000535544 OR11H2Q8NH07 326 aa6.49□□□□□ -1.37
LINC00943-203ENST00000535544 TMEM141Q96I45 108 aa6.49□□□□□ -1.37
LINC00943-203ENST00000535544 VCX2Q9H322 139 aa6.49□□□□□ -1.37
LINC00943-203ENST00000535544 X6R8D5 127 aa6.49□□□□□ -1.37
LINC00943-203ENST00000535544 A0A096LPF7 62 aa6.49□□□□□ -1.37
LINC00943-203ENST00000535544 E9PLD3 99 aa6.49□□□□□ -1.37
LINC00943-203ENST00000535544 DAZ2Q13117 558 aaKnown RBP6.49□□□□□ -1.37
LINC00943-203ENST00000535544 KRTAP24-1Q3LI83 254 aa6.49□□□□□ -1.37
LINC00943-203ENST00000535544 PTH2Q96A98 100 aa6.49□□□□□ -1.37
LINC00943-203ENST00000535544 EDA2RQ9HAV5 297 aa6.49□□□□□ -1.37
LINC00943-203ENST00000535544 MYMXA0A1B0GTQ4 84 aa6.49□□□□□ -1.37
LINC00943-203ENST00000535544 ZNF815PA8K554 130 aa6.49□□□□□ -1.37
LINC00943-203ENST00000535544 K7EQD1 137 aa6.49□□□□□ -1.37
LINC00943-203ENST00000535544 ZNF22P17026 224 aaPredicted RBP6.49□□□□□ -1.37
LINC00943-203ENST00000535544 COX6A2Q02221 97 aa6.49□□□□□ -1.37
LINC00943-203ENST00000535544 FAM110AQ9BQ89 295 aa6.49□□□□□ -1.37
LINC00943-203ENST00000535544 TRAV4A0A0B4J268 109 aa6.48□□□□□ -1.37
LINC00943-203ENST00000535544 HSD52Q0P140 79 aa6.48□□□□□ -1.37
LINC00943-203ENST00000535544 COTL1Q14019 142 aa6.48□□□□□ -1.37
LINC00943-203ENST00000535544 PIK3CD-AS1Q5SR53 167 aa6.48□□□□□ -1.37
LINC00943-203ENST00000535544 C16orf74Q96GX8 76 aa6.48□□□□□ -1.37
LINC00943-203ENST00000535544 RHODO00212 210 aa6.48□□□□□ -1.37
LINC00943-203ENST00000535544 SIVA1O15304 175 aa6.48□□□□□ -1.37
LINC00943-203ENST00000535544 FHL2Q14192 279 aa6.48□□□□□ -1.37
LINC00943-203ENST00000535544 AMELXQ99217 191 aa6.48□□□□□ -1.37
LINC00943-203ENST00000535544 COL7A1Q02388 2944 aa6.48□□□□□ -1.37
LINC00943-203ENST00000535544 H3BUT2 72 aa6.47□□□□□ -1.37
LINC00943-203ENST00000535544 VAMP3Q15836 100 aa6.47□□□□□ -1.37
LINC00943-203ENST00000535544 NHP2Q9NX24 153 aaKnown RBP6.47□□□□□ -1.37
LINC00943-203ENST00000535544 CSMD3Q7Z407 3707 aa6.47□□□□□ -1.37
LINC00943-203ENST00000535544 C9orf66Q5T8R8 295 aa6.47□□□□□ -1.37
LINC00943-203ENST00000535544 HIST1H4GQ99525 98 aa6.47□□□□□ -1.37
LINC00943-203ENST00000535544 OVOL2Q9BRP0 275 aa6.47□□□□□ -1.37
LINC00943-203ENST00000535544 TRGV4A0A0C4DH28 118 aa6.46□□□□□ -1.37
LINC00943-203ENST00000535544 UBE2D3P61077 147 aa6.46□□□□□ -1.37
LINC00943-203ENST00000535544 UBE2D2P62837 147 aa6.46□□□□□ -1.37
LINC00943-203ENST00000535544 CEND1Q8N111 149 aa6.46□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms