RNA–Protein interactions for RNA: ENST00000534633.5

USF1-211, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 610 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-211ENST00000534633 ANAPC16Q96DE5 110 aa8.29□□□□□ -1.08
USF1-211ENST00000534633 NIT2Q9NQR4 276 aa8.29□□□□□ -1.08
USF1-211ENST00000534633 A0A087WWC5 75 aa8.28□□□□□ -1.08
USF1-211ENST00000534633 A0A1B0GXF2 115 aa8.28□□□□□ -1.08
USF1-211ENST00000534633 PPP1R2P9O14990 202 aa8.28□□□□□ -1.08
USF1-211ENST00000534633 AMN1Q8IY45 258 aa8.28□□□□□ -1.08
USF1-211ENST00000534633 LINC00528Q8N1L1 170 aa8.28□□□□□ -1.08
USF1-211ENST00000534633 BORCS7Q96B45 105 aa8.28□□□□□ -1.08
USF1-211ENST00000534633 RPL39LQ96EH5 51 aaKnown RBP8.28□□□□□ -1.08
USF1-211ENST00000534633 DNAJC30Q96LL9 226 aa8.28□□□□□ -1.08
USF1-211ENST00000534633 CARHSP1Q9Y2V2 147 aaKnown RBP8.28□□□□□ -1.08
USF1-211ENST00000534633 COX11Q9Y6N1 276 aa8.28□□□□□ -1.08
USF1-211ENST00000534633 TRBV6-8A0A0A6YYG3 113 aa8.27□□□□□ -1.09
USF1-211ENST00000534633 H7C1H1 209 aa8.27□□□□□ -1.09
USF1-211ENST00000534633 CAMPP49913 170 aa8.27□□□□□ -1.09
USF1-211ENST00000534633 MRPL54Q6P161 138 aaKnown RBP8.27□□□□□ -1.09
USF1-211ENST00000534633 SMIM15Q7Z3B0 74 aa8.27□□□□□ -1.09
USF1-211ENST00000534633 DAZ4Q86SG3 579 aaKnown RBP8.27□□□□□ -1.09
USF1-211ENST00000534633 DEFB104AQ8WTQ1 72 aa8.27□□□□□ -1.09
USF1-211ENST00000534633 DAZ3Q9NR90 486 aaKnown RBP8.27□□□□□ -1.09
USF1-211ENST00000534633 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.26□□□□□ -1.09
USF1-211ENST00000534633 KRTAP29-1A8MX34 341 aaPredicted RBP8.26□□□□□ -1.09
USF1-211ENST00000534633 LECT2O14960 151 aa8.26□□□□□ -1.09
USF1-211ENST00000534633 RPS10P46783 165 aaKnown RBP8.26□□□□□ -1.09
USF1-211ENST00000534633 FAM104BQ5XKR9 115 aa8.26□□□□□ -1.09
USF1-211ENST00000534633 DNAH8Q96JB1 4490 aa8.25□□□□□ -1.09
USF1-211ENST00000534633 SMKR1H3BMG3 65 aa8.25□□□□□ -1.09
USF1-211ENST00000534633 MRPL51Q4U2R6 128 aaKnown RBP8.25□□□□□ -1.09
USF1-211ENST00000534633 NIT1Q86X76 327 aa8.25□□□□□ -1.09
USF1-211ENST00000534633 RMI2Q96E14 147 aa8.25□□□□□ -1.09
USF1-211ENST00000534633 URGCP-MRPS24S4R325 110 aa8.25□□□□□ -1.09
USF1-211ENST00000534633 TRBV6-5A0A0K0K1A5 114 aa8.24□□□□□ -1.09
USF1-211ENST00000534633 A0A1B0GW15 77 aa8.24□□□□□ -1.09
USF1-211ENST00000534633 C7orf77A4D0Y5 90 aa8.24□□□□□ -1.09
USF1-211ENST00000534633 HBBP68871 147 aa8.24□□□□□ -1.09
USF1-211ENST00000534633 SLC7A5P1Q8MH63 180 aa8.24□□□□□ -1.09
USF1-211ENST00000534633 NRACQ8N912 160 aa8.24□□□□□ -1.09
USF1-211ENST00000534633 Q8N976 141 aa8.24□□□□□ -1.09
USF1-211ENST00000534633 BAALCQ8WXS3 180 aa8.24□□□□□ -1.09
USF1-211ENST00000534633 CTDSP1Q9GZU7 261 aa8.24□□□□□ -1.09
USF1-211ENST00000534633 NCR2O95944 276 aa8.23□□□□□ -1.09
USF1-211ENST00000534633 POLR2KP53803 58 aaKnown RBP8.23□□□□□ -1.09
USF1-211ENST00000534633 SCXQ7RTU7 201 aa8.23□□□□□ -1.09
USF1-211ENST00000534633 ATP5L2Q7Z4Y8 100 aa8.23□□□□□ -1.09
USF1-211ENST00000534633 CLRN3Q8NCR9 226 aa8.23□□□□□ -1.09
USF1-211ENST00000534633 MRAP2Q96G30 205 aa8.23□□□□□ -1.09
USF1-211ENST00000534633 IMMP2LQ96T52 175 aa8.23□□□□□ -1.09
USF1-211ENST00000534633 SDHAF1A6NFY7 115 aa8.22□□□□□ -1.09
USF1-211ENST00000534633 IQCJQ1A5X6 159 aa8.22□□□□□ -1.09
USF1-211ENST00000534633 CHCHD7Q9BUK0 85 aa8.22□□□□□ -1.09
USF1-211ENST00000534633 TMEM242Q9NWH2 141 aa8.22□□□□□ -1.09
USF1-211ENST00000534633 IGKV2D-24A0A075B6R9 120 aa8.21□□□□□ -1.1
USF1-211ENST00000534633 APOC3P02656 99 aa8.21□□□□□ -1.1
USF1-211ENST00000534633 LINC01620Q4KN68 170 aa8.21□□□□□ -1.1
USF1-211ENST00000534633 CHAC1Q9BUX1 264 aa8.21□□□□□ -1.1
USF1-211ENST00000534633 ELOBQ15370 118 aa8.2□□□□□ -1.1
USF1-211ENST00000534633 MPV17L2Q567V2 206 aa8.2□□□□□ -1.1
USF1-211ENST00000534633 TMEM97Q5BJF2 176 aa8.2□□□□□ -1.1
USF1-211ENST00000534633 ATRAIDQ6UW56 229 aa8.2□□□□□ -1.1
USF1-211ENST00000534633 BTF3L4Q96K17 158 aa8.2□□□□□ -1.1
USF1-211ENST00000534633 KLK12Q9UKR0 248 aa8.2□□□□□ -1.1
USF1-211ENST00000534633 TRBV24-1A0A075B6N3 115 aa8.19□□□□□ -1.1
USF1-211ENST00000534633 TRBV25-1A0A075B6N4 114 aa8.19□□□□□ -1.1
USF1-211ENST00000534633 A0A087WX48 190 aa8.19□□□□□ -1.1
USF1-211ENST00000534633 IGHV1-24A0A0C4DH33 117 aa8.19□□□□□ -1.1
USF1-211ENST00000534633 TRBV27A0A0K0K1C4 114 aa8.19□□□□□ -1.1
USF1-211ENST00000534633 TMEM262E9PQX1 116 aa8.19□□□□□ -1.1
USF1-211ENST00000534633 TSHBP01222 138 aa8.19□□□□□ -1.1
USF1-211ENST00000534633 S100A8P05109 93 aa8.19□□□□□ -1.1
USF1-211ENST00000534633 GAGE6Q13070 117 aa8.19□□□□□ -1.1
USF1-211ENST00000534633 RHEBQ15382 184 aa8.19□□□□□ -1.1
USF1-211ENST00000534633 KCNIP4Q6PIL6 250 aa8.19□□□□□ -1.1
USF1-211ENST00000534633 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.19□□□□□ -1.1
USF1-211ENST00000534633 UBE2WQ96B02 151 aa8.19□□□□□ -1.1
USF1-211ENST00000534633 CHCHD5Q9BSY4 110 aa8.19□□□□□ -1.1
USF1-211ENST00000534633 ST20Q9HBF5 79 aa8.19□□□□□ -1.1
USF1-211ENST00000534633 RPS10P5Q9NQ39 176 aa8.19□□□□□ -1.1
USF1-211ENST00000534633 D6R8Y8 96 aa8.18□□□□□ -1.1
USF1-211ENST00000534633 I3L3M4 83 aa8.18□□□□□ -1.1
USF1-211ENST00000534633 CKS2P33552 79 aa8.18□□□□□ -1.1
USF1-211ENST00000534633 KRTAP10-4P60372 401 aaPredicted RBP8.18□□□□□ -1.1
USF1-211ENST00000534633 RBX1P62877 108 aa8.18□□□□□ -1.1
USF1-211ENST00000534633 Q0VG73 95 aa8.18□□□□□ -1.1
USF1-211ENST00000534633 COTL1Q14019 142 aa8.18□□□□□ -1.1
USF1-211ENST00000534633 SERTAD4-AS1Q5TG53 156 aa8.18□□□□□ -1.1
USF1-211ENST00000534633 TMEM136Q6ZRR5 245 aa8.18□□□□□ -1.1
USF1-211ENST00000534633 CIRBP-AS1Q8TBR5 109 aa8.18□□□□□ -1.1
USF1-211ENST00000534633 TNFRSF6BO95407 300 aa8.17□□□□□ -1.1
USF1-211ENST00000534633 OXTP01178 125 aa8.17□□□□□ -1.1
USF1-211ENST00000534633 NPYP01303 97 aa8.17□□□□□ -1.1
USF1-211ENST00000534633 ESDP10768 282 aa8.17□□□□□ -1.1
USF1-211ENST00000534633 SUMO2P61956 95 aaKnown RBP8.17□□□□□ -1.1
USF1-211ENST00000534633 C14orf177Q52M58 125 aa8.17□□□□□ -1.1
USF1-211ENST00000534633 ENHOQ6UWT2 76 aa8.17□□□□□ -1.1
USF1-211ENST00000534633 TMEM243Q9BU79 118 aa8.17□□□□□ -1.1
USF1-211ENST00000534633 IGLV4-60A0A075B6I1 120 aa8.16□□□□□ -1.1
USF1-211ENST00000534633 TRAV9-1A0A075B6T8 112 aa8.16□□□□□ -1.1
USF1-211ENST00000534633 VCYO14598 125 aa8.16□□□□□ -1.1
USF1-211ENST00000534633 PMCHP20382 165 aa8.16□□□□□ -1.1
USF1-211ENST00000534633 AMTP48728 403 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms