RNA–Protein interactions for RNA: ENST00000534315.5

FOXRED1-218, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 1 (best)

Gene FOXRED1, Length 2,210 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-218ENST00000534315 TRGV1A0A0A0MS02 117 aa9.84□□□□□ -0.83
FOXRED1-218ENST00000534315 C2CD3Q4AC94 2353 aa9.83□□□□□ -0.84
FOXRED1-218ENST00000534315 IGLV4-3A0A075B6K6 122 aa9.83□□□□□ -0.84
FOXRED1-218ENST00000534315 RPL35AP18077 110 aaKnown RBP9.83□□□□□ -0.84
FOXRED1-218ENST00000534315 AMMECR1LQ6DCA0 310 aa9.83□□□□□ -0.84
FOXRED1-218ENST00000534315 NDUFA11Q86Y39 141 aa9.83□□□□□ -0.84
FOXRED1-218ENST00000534315 CEND1Q8N111 149 aa9.83□□□□□ -0.84
FOXRED1-218ENST00000534315 FAM110AQ9BQ89 295 aa9.83□□□□□ -0.84
FOXRED1-218ENST00000534315 INAFM1C9JVW0 142 aa9.83□□□□□ -0.84
FOXRED1-218ENST00000534315 NSD1Q96L73 2696 aaPredicted RBP9.83□□□□□ -0.84
FOXRED1-218ENST00000534315 FN1P02751 2386 aaKnown RBP9.82□□□□□ -0.84
FOXRED1-218ENST00000534315 TMEM170BQ5T4T1 132 aa9.82□□□□□ -0.84
FOXRED1-218ENST00000534315 TMEM263Q8WUH6 116 aaKnown RBP9.82□□□□□ -0.84
FOXRED1-218ENST00000534315 RAB37Q96AX2 223 aa9.82□□□□□ -0.84
FOXRED1-218ENST00000534315 TM2D2Q9BX73 214 aa9.82□□□□□ -0.84
FOXRED1-218ENST00000534315 IGHV3-38A0A0C4DH36 116 aa9.82□□□□□ -0.84
FOXRED1-218ENST00000534315 C9orf118A6NHY6 69 aa9.82□□□□□ -0.84
FOXRED1-218ENST00000534315 ZNF815PA8K554 130 aa9.82□□□□□ -0.84
FOXRED1-218ENST00000534315 HERVK_113P61574 105 aa9.82□□□□□ -0.84
FOXRED1-218ENST00000534315 PF4P02776 101 aa9.81□□□□□ -0.84
FOXRED1-218ENST00000534315 Q6ZTI0 123 aa9.81□□□□□ -0.84
FOXRED1-218ENST00000534315 NFE4Q86UQ8 179 aa9.81□□□□□ -0.84
FOXRED1-218ENST00000534315 OR4C5Q8NGB2 326 aa9.81□□□□□ -0.84
FOXRED1-218ENST00000534315 PHLDA1Q8WV24 401 aaPredicted RBP9.81□□□□□ -0.84
FOXRED1-218ENST00000534315 DNAJC30Q96LL9 226 aa9.81□□□□□ -0.84
FOXRED1-218ENST00000534315 NAA38Q9BRA0 125 aaKnown RBP9.81□□□□□ -0.84
FOXRED1-218ENST00000534315 TAL2Q16559 108 aa9.8□□□□□ -0.84
FOXRED1-218ENST00000534315 CEMP1Q6PRD7 247 aaPredicted RBP9.8□□□□□ -0.84
FOXRED1-218ENST00000534315 FAM104AQ969W3 186 aa9.8□□□□□ -0.84
FOXRED1-218ENST00000534315 ZNF479Q96JC4 524 aa9.8□□□□□ -0.84
FOXRED1-218ENST00000534315 HIST1H4GQ99525 98 aa9.8□□□□□ -0.84
FOXRED1-218ENST00000534315 CHCHD7Q9BUK0 85 aa9.8□□□□□ -0.84
FOXRED1-218ENST00000534315 VCX2Q9H322 139 aa9.8□□□□□ -0.84
FOXRED1-218ENST00000534315 PYGO1Q9Y3Y4 419 aa9.8□□□□□ -0.84
FOXRED1-218ENST00000534315 TRBV7-3A0A075B6L6 115 aa9.8□□□□□ -0.84
FOXRED1-218ENST00000534315 H3BUT2 72 aa9.8□□□□□ -0.84
FOXRED1-218ENST00000534315 LINC00482Q8N8I6 264 aa9.8□□□□□ -0.84
FOXRED1-218ENST00000534315 K7ERJ3 54 aa9.79□□□□□ -0.84
FOXRED1-218ENST00000534315 SMIM13P0DJ93 91 aa9.79□□□□□ -0.84
FOXRED1-218ENST00000534315 TSPEAR-AS2P59090 65 aa9.79□□□□□ -0.84
FOXRED1-218ENST00000534315 PLEKHB2Q96CS7 222 aa9.79□□□□□ -0.84
FOXRED1-218ENST00000534315 NHP2Q9NX24 153 aaKnown RBP9.79□□□□□ -0.84
FOXRED1-218ENST00000534315 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.79□□□□□ -0.84
FOXRED1-218ENST00000534315 A0A0J9YXV3 536 aa9.79□□□□□ -0.84
FOXRED1-218ENST00000534315 IGKV2-29A2NJV5 120 aaPredicted RBP9.79□□□□□ -0.84
FOXRED1-218ENST00000534315 NOP10Q9NPE3 64 aaKnown RBP9.79□□□□□ -0.84
FOXRED1-218ENST00000534315 COTL1Q14019 142 aa9.78□□□□□ -0.84
FOXRED1-218ENST00000534315 CSNK1G2-AS1Q8NCQ2 148 aa9.78□□□□□ -0.84
FOXRED1-218ENST00000534315 AMELXQ99217 191 aa9.78□□□□□ -0.84
FOXRED1-218ENST00000534315 PLAC8L1A1L4L8 177 aa9.78□□□□□ -0.84
FOXRED1-218ENST00000534315 RNASE13Q5GAN3 156 aaKnown RBP9.78□□□□□ -0.84
FOXRED1-218ENST00000534315 SCGB1D4Q6XE38 83 aa9.78□□□□□ -0.84
FOXRED1-218ENST00000534315 C1QTNF4Q9BXJ3 329 aa9.78□□□□□ -0.84
FOXRED1-218ENST00000534315 TRAV4A0A0B4J268 109 aa9.77□□□□□ -0.85
FOXRED1-218ENST00000534315 ZNF22P17026 224 aaPredicted RBP9.77□□□□□ -0.85
FOXRED1-218ENST00000534315 DAZ2Q13117 558 aaKnown RBP9.77□□□□□ -0.85
FOXRED1-218ENST00000534315 C16orf74Q96GX8 76 aa9.77□□□□□ -0.85
FOXRED1-218ENST00000534315 UBE2D4Q9Y2X8 147 aa9.77□□□□□ -0.85
FOXRED1-218ENST00000534315 HIVEP1P15822 2718 aa9.77□□□□□ -0.85
FOXRED1-218ENST00000534315 TMEM223A0PJW6 202 aa9.76□□□□□ -0.85
FOXRED1-218ENST00000534315 SPANXA1Q9NS26 97 aa9.76□□□□□ -0.85
FOXRED1-218ENST00000534315 J3QQQ9 107 aa9.75□□□□□ -0.85
FOXRED1-218ENST00000534315 K7EQD1 137 aa9.75□□□□□ -0.85
FOXRED1-218ENST00000534315 CRYBA4P53673 196 aa9.75□□□□□ -0.85
FOXRED1-218ENST00000534315 RRN3P1Q2M238 152 aa9.75□□□□□ -0.85
FOXRED1-218ENST00000534315 Q6ZUT4 128 aa9.75□□□□□ -0.85
FOXRED1-218ENST00000534315 VWFP04275 2813 aa9.75□□□□□ -0.85
FOXRED1-218ENST00000534315 IGHV3-64A0A075B6Q5 118 aa9.74□□□□□ -0.85
FOXRED1-218ENST00000534315 A0A1W2PPM0 123 aa9.74□□□□□ -0.85
FOXRED1-218ENST00000534315 GAGE12BA1L429 117 aa9.74□□□□□ -0.85
FOXRED1-218ENST00000534315 GAGE10A6NGK3 116 aa9.74□□□□□ -0.85
FOXRED1-218ENST00000534315 GAGE7O76087 117 aa9.74□□□□□ -0.85
FOXRED1-218ENST00000534315 GAGE12FP0CL80 117 aa9.74□□□□□ -0.85
FOXRED1-218ENST00000534315 GAGE12GP0CL81 117 aa9.74□□□□□ -0.85
FOXRED1-218ENST00000534315 GAGE12IP0CL82 117 aa9.74□□□□□ -0.85
FOXRED1-218ENST00000534315 SLC25A29Q8N8R3 303 aa9.74□□□□□ -0.85
FOXRED1-218ENST00000534315 SPATA3Q8NHX4 192 aa9.74□□□□□ -0.85
FOXRED1-218ENST00000534315 A0A0J9YY99 117 aa9.74□□□□□ -0.85
FOXRED1-218ENST00000534315 TRBV10-1A0A0K0K1A3 114 aa9.74□□□□□ -0.85
FOXRED1-218ENST00000534315 LEPROTO15243 131 aa9.74□□□□□ -0.85
FOXRED1-218ENST00000534315 LGALS3P17931 250 aaKnown RBP9.74□□□□□ -0.85
FOXRED1-218ENST00000534315 MRPS36P82909 103 aaKnown RBP9.74□□□□□ -0.85
FOXRED1-218ENST00000534315 RPL36AP83881 106 aaKnown RBP9.74□□□□□ -0.85
FOXRED1-218ENST00000534315 C12orf74Q32Q52 190 aa9.74□□□□□ -0.85
FOXRED1-218ENST00000534315 SAMD5Q5TGI4 173 aa9.74□□□□□ -0.85
FOXRED1-218ENST00000534315 RPL36ALQ969Q0 106 aaKnown RBP9.74□□□□□ -0.85
FOXRED1-218ENST00000534315 SVIPQ8NHG7 77 aa9.73□□□□□ -0.85
FOXRED1-218ENST00000534315 TRGV2A0A075B6R0 118 aa9.72□□□□□ -0.85
FOXRED1-218ENST00000534315 SRSF9Q13242 221 aaKnown RBP eCLIP9.72□□□□□ -0.852e-8■■■□□ 15
FOXRED1-218ENST00000534315 TENM1Q9UKZ4 2725 aa9.72□□□□□ -0.85
FOXRED1-218ENST00000534315 K7EP34 96 aa9.72□□□□□ -0.85
FOXRED1-218ENST00000534315 GTF2H5Q6ZYL4 71 aa9.72□□□□□ -0.85
FOXRED1-218ENST00000534315 OVOL2Q9BRP0 275 aa9.72□□□□□ -0.85
FOXRED1-218ENST00000534315 GAGE12JA6NER3 117 aa9.71□□□□□ -0.85
FOXRED1-218ENST00000534315 UBE2D3P61077 147 aa9.71□□□□□ -0.85
FOXRED1-218ENST00000534315 UBE2D2P62837 147 aa9.71□□□□□ -0.85
FOXRED1-218ENST00000534315 GAGE4Q13068 117 aa9.71□□□□□ -0.85
FOXRED1-218ENST00000534315 GAGE5Q13069 117 aa9.71□□□□□ -0.85
FOXRED1-218ENST00000534315 GAGE13Q4V321 117 aa9.71□□□□□ -0.85
FOXRED1-218ENST00000534315 A0A1B0GWB2 263 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms