RNA–Protein interactions for RNA: ENST00000534001.1

APLP2-223, Transcript of amyloid beta precursor like protein 2, human

TSL 4

Gene APLP2, Length 585 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APLP2-223	ENST00000534001	NIT2	Q9NQR4	276 aa		13.39	□□□□□ -0.27
APLP2-223	ENST00000534001	MED9	Q9NWA0	146 aa		13.39	□□□□□ -0.27
APLP2-223	ENST00000534001	TNXB	P22105	4242 aa		13.39	□□□□□ -0.27
APLP2-223	ENST00000534001	RPL37A	P61513	92 aa	Known RBP	13.38	□□□□□ -0.27
APLP2-223	ENST00000534001	TCTE3	Q8IZS6	198 aa		13.38	□□□□□ -0.27
APLP2-223	ENST00000534001	IFNA1	P01562	189 aa		13.37	□□□□□ -0.27
APLP2-223	ENST00000534001	WDR73	Q6P4I2	378 aa		13.37	□□□□□ -0.27
APLP2-223	ENST00000534001	GATD1	Q8NB37	220 aa		13.37	□□□□□ -0.27
APLP2-223	ENST00000534001	TRGC1	P0CF51	173 aa		13.36	□□□□□ -0.27
APLP2-223	ENST00000534001	EIF5AL1	Q6IS14	154 aa	Known RBP	13.36	□□□□□ -0.27
APLP2-223	ENST00000534001	CLRN3	Q8NCR9	226 aa		13.36	□□□□□ -0.27
APLP2-223	ENST00000534001	RNASE7	Q9H1E1	156 aa	Known RBP	13.36	□□□□□ -0.27
APLP2-223	ENST00000534001	TRAV8-4	A0A0B4J246	113 aa		13.35	□□□□□ -0.27
APLP2-223	ENST00000534001	GTSF1	Q8WW33	167 aa		13.35	□□□□□ -0.27
APLP2-223	ENST00000534001	TRAV26-2	A0A0B4J265	109 aa		13.34	□□□□□ -0.27
APLP2-223	ENST00000534001	XKRY2	A2RUG3	117 aa		13.34	□□□□□ -0.27
APLP2-223	ENST00000534001	FOXA3	P55318	350 aa	Predicted RBP	13.34	□□□□□ -0.27
APLP2-223	ENST00000534001	C15orf56	Q8N910	161 aa		13.34	□□□□□ -0.27
APLP2-223	ENST00000534001	OCC1	Q8TAD7	63 aa		13.34	□□□□□ -0.27
APLP2-223	ENST00000534001	TEX46	H3BTG2	121 aa		13.33	□□□□□ -0.28
APLP2-223	ENST00000534001	SLC51B	Q86UW2	128 aa		13.33	□□□□□ -0.28
APLP2-223	ENST00000534001	RPP21	Q9H633	154 aa	Known RBP	13.33	□□□□□ -0.28
APLP2-223	ENST00000534001	hDV102S1	A0JD36	115 aa		13.32	□□□□□ -0.28
APLP2-223	ENST00000534001	CHTF8	P0CG12	524 aa		13.32	□□□□□ -0.28
APLP2-223	ENST00000534001	MT1HL1	P0DM35	61 aa		13.32	□□□□□ -0.28
APLP2-223	ENST00000534001		Q6ZNX1	250 aa		13.32	□□□□□ -0.28
APLP2-223	ENST00000534001	RPL39L	Q96EH5	51 aa	Known RBP	13.32	□□□□□ -0.28
APLP2-223	ENST00000534001	AMT	P48728	403 aa		13.31	□□□□□ -0.28
APLP2-223	ENST00000534001	COTL1	Q14019	142 aa		13.31	□□□□□ -0.28
APLP2-223	ENST00000534001	BIN3	Q9NQY0	253 aa		13.31	□□□□□ -0.28
APLP2-223	ENST00000534001	TWIST1	Q15672	202 aa		13.3	□□□□□ -0.28
APLP2-223	ENST00000534001	SERTAD4-AS1	Q5TG53	156 aa		13.29	□□□□□ -0.28
APLP2-223	ENST00000534001	SPACA4	Q8TDM5	124 aa		13.29	□□□□□ -0.28
APLP2-223	ENST00000534001	GAS8-AS1	O95177	125 aa		13.28	□□□□□ -0.28
APLP2-223	ENST00000534001		A0A087WYN8	130 aa		13.27	□□□□□ -0.29
APLP2-223	ENST00000534001	GAGE12H	A6NDE8	117 aa		13.27	□□□□□ -0.29
APLP2-223	ENST00000534001	IGHV3-64	A0A075B6Q5	118 aa		13.26	□□□□□ -0.29
APLP2-223	ENST00000534001	TAGLN2	P37802	199 aa	Known RBP	13.26	□□□□□ -0.29
APLP2-223	ENST00000534001	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	13.25	□□□□□ -0.29
APLP2-223	ENST00000534001	IGKV2-29	A2NJV5	120 aa	Predicted RBP	13.25	□□□□□ -0.29
APLP2-223	ENST00000534001	FAM231B	A6NCW3	169 aa		13.25	□□□□□ -0.29
APLP2-223	ENST00000534001	UBE2L6	O14933	153 aa		13.25	□□□□□ -0.29
APLP2-223	ENST00000534001	LYPD6B	Q8NI32	183 aa		13.25	□□□□□ -0.29
APLP2-223	ENST00000534001	PLAC8	Q9NZF1	115 aa		13.24	□□□□□ -0.29
APLP2-223	ENST00000534001	IGKV3OR2-268	A0A0C4DH90	116 aa		13.23	□□□□□ -0.29
APLP2-223	ENST00000534001	TMEM250	H0YL14	139 aa		13.23	□□□□□ -0.29
APLP2-223	ENST00000534001	NCR2	O95944	276 aa		13.23	□□□□□ -0.29
APLP2-223	ENST00000534001	FAM231D	Q6ZW35	169 aa		13.23	□□□□□ -0.29
APLP2-223	ENST00000534001	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	13.23	□□□□□ -0.29
APLP2-223	ENST00000534001	RNF185	Q96GF1	192 aa		13.23	□□□□□ -0.29
APLP2-223	ENST00000534001	SDHAF1	A6NFY7	115 aa		13.22	□□□□□ -0.29
APLP2-223	ENST00000534001	FOXI1	Q12951	378 aa		13.22	□□□□□ -0.29
APLP2-223	ENST00000534001	HIGD2B	Q4VC39	106 aa		13.22	□□□□□ -0.29
APLP2-223	ENST00000534001	AP5S1	Q9NUS5	200 aa		13.22	□□□□□ -0.29
APLP2-223	ENST00000534001	TRBV6-5	A0A0K0K1A5	114 aa		13.21	□□□□□ -0.29
APLP2-223	ENST00000534001	FGF6	P10767	208 aa		13.21	□□□□□ -0.29
APLP2-223	ENST00000534001	ALKAL2	Q6UX46	152 aa		13.21	□□□□□ -0.29
APLP2-223	ENST00000534001	PRSS3P2	Q8NHM4	247 aa		13.21	□□□□□ -0.29
APLP2-223	ENST00000534001	LRP2	P98164	4655 aa		13.21	□□□□□ -0.3
APLP2-223	ENST00000534001	GVQW2	A0A096LPI5	108 aa	Predicted RBP	13.2	□□□□□ -0.3
APLP2-223	ENST00000534001	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	13.2	□□□□□ -0.3
APLP2-223	ENST00000534001	GATC	O43716	136 aa	Known RBP	13.2	□□□□□ -0.3
APLP2-223	ENST00000534001	ESD	P10768	282 aa		13.2	□□□□□ -0.3
APLP2-223	ENST00000534001	COX6A2	Q02221	97 aa		13.2	□□□□□ -0.3
APLP2-223	ENST00000534001		H7C423	109 aa		13.19	□□□□□ -0.3
APLP2-223	ENST00000534001	TSHB	P01222	138 aa		13.19	□□□□□ -0.3
APLP2-223	ENST00000534001	APCS	P02743	223 aa		13.19	□□□□□ -0.3
APLP2-223	ENST00000534001	CT83	Q5H943	113 aa		13.18	□□□□□ -0.3
APLP2-223	ENST00000534001		Q6ZRU5	148 aa		13.18	□□□□□ -0.3
APLP2-223	ENST00000534001	PLA2G2D	Q9UNK4	145 aa		13.18	□□□□□ -0.3
APLP2-223	ENST00000534001		A8MWL6	223 aa		13.17	□□□□□ -0.3
APLP2-223	ENST00000534001	PHOX2A	O14813	284 aa		13.17	□□□□□ -0.3
APLP2-223	ENST00000534001	RPS10	P46783	165 aa	Known RBP	13.17	□□□□□ -0.3
APLP2-223	ENST00000534001	AMMECR1L	Q6DCA0	310 aa		13.17	□□□□□ -0.3
APLP2-223	ENST00000534001	RNASEK	Q6P5S7	137 aa	Known RBP	13.17	□□□□□ -0.3
APLP2-223	ENST00000534001	OR5A1	Q8NGJ0	315 aa		13.16	□□□□□ -0.3
APLP2-223	ENST00000534001		I3L3M4	83 aa		13.15	□□□□□ -0.3
APLP2-223	ENST00000534001	POLR2K	P53803	58 aa	Known RBP	13.15	□□□□□ -0.3
APLP2-223	ENST00000534001	BLOC1S1	P78537	153 aa		13.15	□□□□□ -0.3
APLP2-223	ENST00000534001	CFAP161	Q6P656	301 aa		13.15	□□□□□ -0.3
APLP2-223	ENST00000534001	TEX261	Q6UWH6	196 aa		13.15	□□□□□ -0.3
APLP2-223	ENST00000534001	LINC01551	Q86U37	167 aa		13.15	□□□□□ -0.3
APLP2-223	ENST00000534001	TMEM242	Q9NWH2	141 aa		13.15	□□□□□ -0.3
APLP2-223	ENST00000534001		A0A096LNI7	61 aa		13.14	□□□□□ -0.31
APLP2-223	ENST00000534001	LINC00959	A0A1B0GUT2	108 aa		13.14	□□□□□ -0.31
APLP2-223	ENST00000534001	NDUFS6	O75380	124 aa	Known RBP	13.14	□□□□□ -0.31
APLP2-223	ENST00000534001	ZNF25	P17030	456 aa	Predicted RBP	13.14	□□□□□ -0.31
APLP2-223	ENST00000534001	SMIM15	Q7Z3B0	74 aa		13.14	□□□□□ -0.31
APLP2-223	ENST00000534001	AKAP14	Q86UN6	197 aa		13.13	□□□□□ -0.31
APLP2-223	ENST00000534001	LINC00526	Q96FQ7	95 aa		13.13	□□□□□ -0.31
APLP2-223	ENST00000534001	TMEM191A	Q9H0A3	160 aa		13.13	□□□□□ -0.31
APLP2-223	ENST00000534001	IGKV2-24	A0A0C4DH68	120 aa		13.12	□□□□□ -0.31
APLP2-223	ENST00000534001	HIGD1C	A8MV81	97 aa		13.12	□□□□□ -0.31
APLP2-223	ENST00000534001	CCL25	O15444	150 aa		13.12	□□□□□ -0.31
APLP2-223	ENST00000534001	RAB4A	P20338	218 aa		13.12	□□□□□ -0.31
APLP2-223	ENST00000534001	PMCH	P20382	165 aa		13.12	□□□□□ -0.31
APLP2-223	ENST00000534001	XCL1	P47992	114 aa		13.12	□□□□□ -0.31
APLP2-223	ENST00000534001	TSKU	Q8WUA8	353 aa		13.12	□□□□□ -0.31
APLP2-223	ENST00000534001	TRBV27	A0A0K0K1C4	114 aa		13.11	□□□□□ -0.31
APLP2-223	ENST00000534001	CEBPG	P53567	150 aa		13.11	□□□□□ -0.31

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