RNA–Protein interactions for RNA: ENST00000533889.1

CAPN5-207, Transcript of calpain 5, humanhuman

TSL 3

Gene CAPN5, Length 542 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN5-207ENST00000533889 K7EN84 100 aa11.35□□□□□ -0.59
CAPN5-207ENST00000533889 AMTP48728 403 aa11.35□□□□□ -0.59
CAPN5-207ENST00000533889 C9orf163Q8N9P6 203 aa11.35□□□□□ -0.59
CAPN5-207ENST00000533889 CLRN3Q8NCR9 226 aa11.35□□□□□ -0.59
CAPN5-207ENST00000533889 Q6ZNX1 250 aa11.34□□□□□ -0.59
CAPN5-207ENST00000533889 SMIM15Q7Z3B0 74 aa11.34□□□□□ -0.59
CAPN5-207ENST00000533889 AKAP14Q86UN6 197 aa11.34□□□□□ -0.59
CAPN5-207ENST00000533889 CNFNQ9BYD5 112 aa11.34□□□□□ -0.59
CAPN5-207ENST00000533889 TRAV26-2A0A0B4J265 109 aa11.33□□□□□ -0.6
CAPN5-207ENST00000533889 BLOC1S1P78537 153 aa11.33□□□□□ -0.6
CAPN5-207ENST00000533889 ALKAL2Q6UX46 152 aa11.33□□□□□ -0.6
CAPN5-207ENST00000533889 GATD1Q8NB37 220 aa11.33□□□□□ -0.6
CAPN5-207ENST00000533889 GFRA4Q9GZZ7 299 aa11.33□□□□□ -0.6
CAPN5-207ENST00000533889 hDV102S1A0JD36 115 aa11.32□□□□□ -0.6
CAPN5-207ENST00000533889 KRTAP29-1A8MX34 341 aaPredicted RBP11.32□□□□□ -0.6
CAPN5-207ENST00000533889 GATCO43716 136 aaKnown RBP11.32□□□□□ -0.6
CAPN5-207ENST00000533889 CEBPGP53567 150 aa11.32□□□□□ -0.6
CAPN5-207ENST00000533889 GTSF1Q8WW33 167 aa11.32□□□□□ -0.6
CAPN5-207ENST00000533889 hCG_2014768A0A024R1R8 64 aa11.31□□□□□ -0.6
CAPN5-207ENST00000533889 TMEM250H0YL14 139 aa11.31□□□□□ -0.6
CAPN5-207ENST00000533889 FOXA3P55318 350 aaPredicted RBP11.3□□□□□ -0.6
CAPN5-207ENST00000533889 KRTAP10-4P60372 401 aaPredicted RBP11.3□□□□□ -0.6
CAPN5-207ENST00000533889 RPL39LQ96EH5 51 aaKnown RBP11.3□□□□□ -0.6
CAPN5-207ENST00000533889 AP5S1Q9NUS5 200 aa11.3□□□□□ -0.6
CAPN5-207ENST00000533889 IGKV3OR2-268A0A0C4DH90 116 aa11.29□□□□□ -0.6
CAPN5-207ENST00000533889 A8MWL6 223 aa11.29□□□□□ -0.6
CAPN5-207ENST00000533889 RPL37AP61513 92 aaKnown RBP11.29□□□□□ -0.6
CAPN5-207ENST00000533889 AMMECR1LQ6DCA0 310 aa11.29□□□□□ -0.6
CAPN5-207ENST00000533889 TEX261Q6UWH6 196 aa11.29□□□□□ -0.6
CAPN5-207ENST00000533889 SDIM1Q6ZPB5 146 aa11.29□□□□□ -0.6
CAPN5-207ENST00000533889 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.29□□□□□ -0.6
CAPN5-207ENST00000533889 CNBPP62633 177 aaKnown RBP11.28□□□□□ -0.6
CAPN5-207ENST00000533889 FAM231DQ6ZW35 169 aa11.28□□□□□ -0.6
CAPN5-207ENST00000533889 DPH3Q96FX2 82 aa11.28□□□□□ -0.6
CAPN5-207ENST00000533889 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.27□□□□□ -0.61
CAPN5-207ENST00000533889 RNASEKQ6P5S7 137 aaKnown RBP11.27□□□□□ -0.61
CAPN5-207ENST00000533889 BORCS7Q96B45 105 aa11.27□□□□□ -0.61
CAPN5-207ENST00000533889 GAGE12HA6NDE8 117 aa11.26□□□□□ -0.61
CAPN5-207ENST00000533889 PANO1I0J062 215 aa11.26□□□□□ -0.61
CAPN5-207ENST00000533889 NCR2O95944 276 aa11.26□□□□□ -0.61
CAPN5-207ENST00000533889 APCSP02743 223 aa11.26□□□□□ -0.61
CAPN5-207ENST00000533889 LYPD6BQ8NI32 183 aa11.26□□□□□ -0.61
CAPN5-207ENST00000533889 EIF5A2Q9GZV4 153 aaKnown RBP11.26□□□□□ -0.61
CAPN5-207ENST00000533889 IGHV3-64A0A075B6Q5 118 aa11.25□□□□□ -0.61
CAPN5-207ENST00000533889 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.25□□□□□ -0.61
CAPN5-207ENST00000533889 IGKV2-29A2NJV5 120 aaPredicted RBP11.25□□□□□ -0.61
CAPN5-207ENST00000533889 SDHAF1A6NFY7 115 aa11.25□□□□□ -0.61
CAPN5-207ENST00000533889 PMCHP20382 165 aa11.25□□□□□ -0.61
CAPN5-207ENST00000533889 CFAP161Q6P656 301 aa11.25□□□□□ -0.61
CAPN5-207ENST00000533889 CT83Q5H943 113 aa11.24□□□□□ -0.61
CAPN5-207ENST00000533889 SMIM7Q9BQ49 75 aa11.24□□□□□ -0.61
CAPN5-207ENST00000533889 H7C423 109 aa11.23□□□□□ -0.61
CAPN5-207ENST00000533889 I3L3M4 83 aa11.23□□□□□ -0.61
CAPN5-207ENST00000533889 OXTP01178 125 aa11.23□□□□□ -0.61
CAPN5-207ENST00000533889 SLPIP03973 132 aa11.23□□□□□ -0.61
CAPN5-207ENST00000533889 FGF6P10767 208 aa11.23□□□□□ -0.61
CAPN5-207ENST00000533889 CHCHD10Q8WYQ3 142 aaPredicted RBP11.22□□□□□ -0.61
CAPN5-207ENST00000533889 LRP1Q07954 4544 aaKnown RBP11.21□□□□□ -0.61
CAPN5-207ENST00000533889 A0A1B0GUT8 65 aa11.21□□□□□ -0.61
CAPN5-207ENST00000533889 ZNF727A8MUV8 499 aa11.21□□□□□ -0.61
CAPN5-207ENST00000533889 HIGD1CA8MV81 97 aa11.21□□□□□ -0.61
CAPN5-207ENST00000533889 LINC01551Q86U37 167 aa11.21□□□□□ -0.61
CAPN5-207ENST00000533889 C15orf56Q8N910 161 aa11.21□□□□□ -0.61
CAPN5-207ENST00000533889 TSKUQ8WUA8 353 aa11.21□□□□□ -0.61
CAPN5-207ENST00000533889 BTF3L4Q96K17 158 aa11.21□□□□□ -0.61
CAPN5-207ENST00000533889 ST20Q9HBF5 79 aa11.21□□□□□ -0.61
CAPN5-207ENST00000533889 TRBV6-5A0A0K0K1A5 114 aa11.2□□□□□ -0.62
CAPN5-207ENST00000533889 HIGD2BQ4VC39 106 aa11.2□□□□□ -0.62
CAPN5-207ENST00000533889 TMEM101Q96IK0 257 aa11.2□□□□□ -0.62
CAPN5-207ENST00000533889 FAM210AQ96ND0 272 aa11.2□□□□□ -0.62
CAPN5-207ENST00000533889 FAM231BA6NCW3 169 aa11.19□□□□□ -0.62
CAPN5-207ENST00000533889 GAS8-AS1O95177 125 aa11.19□□□□□ -0.62
CAPN5-207ENST00000533889 CHTF8P0CG12 524 aa11.19□□□□□ -0.62
CAPN5-207ENST00000533889 ZNF25P17030 456 aaPredicted RBP11.19□□□□□ -0.62
CAPN5-207ENST00000533889 CIRBPQ14011 172 aaKnown RBP11.19□□□□□ -0.62
CAPN5-207ENST00000533889 TMEM191AQ9H0A3 160 aa11.19□□□□□ -0.62
CAPN5-207ENST00000533889 OSTCQ9NRP0 149 aa11.19□□□□□ -0.62
CAPN5-207ENST00000533889 NDUFS6O75380 124 aaKnown RBP11.18□□□□□ -0.62
CAPN5-207ENST00000533889 SRP19P09132 144 aaKnown RBP11.18□□□□□ -0.62
CAPN5-207ENST00000533889 RPS10P46783 165 aaKnown RBP11.18□□□□□ -0.62
CAPN5-207ENST00000533889 HNRNPA3P51991 378 aaKnown RBP11.18□□□□□ -0.62
CAPN5-207ENST00000533889 OR5A1Q8NGJ0 315 aa11.18□□□□□ -0.62
CAPN5-207ENST00000533889 RNF185Q96GF1 192 aa11.18□□□□□ -0.62
CAPN5-207ENST00000533889 TMEM242Q9NWH2 141 aa11.18□□□□□ -0.62
CAPN5-207ENST00000533889 A0A087WYN8 130 aa11.17□□□□□ -0.62
CAPN5-207ENST00000533889 TSHBP01222 138 aa11.17□□□□□ -0.62
CAPN5-207ENST00000533889 RAB4AP20338 218 aa11.17□□□□□ -0.62
CAPN5-207ENST00000533889 MRAP2Q96G30 205 aa11.17□□□□□ -0.62
CAPN5-207ENST00000533889 FAT3Q8TDW7 4589 aa11.16□□□□□ -0.62
CAPN5-207ENST00000533889 ESDP10768 282 aa11.16□□□□□ -0.62
CAPN5-207ENST00000533889 XCL1P47992 114 aa11.16□□□□□ -0.62
CAPN5-207ENST00000533889 COX6A2Q02221 97 aa11.16□□□□□ -0.62
CAPN5-207ENST00000533889 SERTAD4-AS1Q5TG53 156 aa11.16□□□□□ -0.62
CAPN5-207ENST00000533889 AMN1Q8IY45 258 aa11.16□□□□□ -0.62
CAPN5-207ENST00000533889 SPACA4Q8TDM5 124 aa11.16□□□□□ -0.62
CAPN5-207ENST00000533889 FOXI1Q12951 378 aa11.15□□□□□ -0.62
CAPN5-207ENST00000533889 RIGQ13278 110 aa11.15□□□□□ -0.62
CAPN5-207ENST00000533889 GVQW2A0A096LPI5 108 aaPredicted RBP11.14□□□□□ -0.63
CAPN5-207ENST00000533889 LINC00959A0A1B0GUT2 108 aa11.14□□□□□ -0.63
CAPN5-207ENST00000533889 CCL25O15444 150 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms