RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 ZNF876PQ49A33 203 aa14.32□□□□□ -0.12
CAPN1-226ENST00000533820 RNASE13Q5GAN3 156 aaKnown RBP14.32□□□□□ -0.12
CAPN1-226ENST00000533820 SONP18583 2426 aaKnown RBP14.32□□□□□ -0.12
CAPN1-226ENST00000533820 P0DMU3 169 aa14.31□□□□□ -0.12
CAPN1-226ENST00000533820 FAM231AP0DMU4 169 aa14.31□□□□□ -0.12
CAPN1-226ENST00000533820 FAM231CP0DMU5 169 aa14.31□□□□□ -0.12
CAPN1-226ENST00000533820 TRAV8-4A0A0B4J246 113 aa14.31□□□□□ -0.12
CAPN1-226ENST00000533820 TEX49A0A1B0GTD5 131 aa14.3□□□□□ -0.12
CAPN1-226ENST00000533820 H3BUA1 57 aa14.3□□□□□ -0.12
CAPN1-226ENST00000533820 CFC1BP0CG36 223 aa14.3□□□□□ -0.12
CAPN1-226ENST00000533820 CFC1P0CG37 223 aa14.3□□□□□ -0.12
CAPN1-226ENST00000533820 TRAV2A0A0B4J234 112 aa14.3□□□□□ -0.12
CAPN1-226ENST00000533820 KNCNA6PVL3 124 aa14.3□□□□□ -0.12
CAPN1-226ENST00000533820 M0QY20 66 aa14.3□□□□□ -0.12
CAPN1-226ENST00000533820 PROK1P58294 105 aa14.3□□□□□ -0.12
CAPN1-226ENST00000533820 HIST2H2BDQ6DRA6 164 aa14.3□□□□□ -0.12
CAPN1-226ENST00000533820 IGSF10Q6WRI0 2623 aa14.29□□□□□ -0.12
CAPN1-226ENST00000533820 A0A0J9YXV3 536 aa14.29□□□□□ -0.12
CAPN1-226ENST00000533820 C9orf153Q5TBE3 101 aa14.29□□□□□ -0.12
CAPN1-226ENST00000533820 CEMP1Q6PRD7 247 aaPredicted RBP14.29□□□□□ -0.12
CAPN1-226ENST00000533820 SNRPD3P62318 126 aaKnown RBP14.29□□□□□ -0.12
CAPN1-226ENST00000533820 DEFB112Q30KQ8 113 aa14.29□□□□□ -0.12
CAPN1-226ENST00000533820 Q6Q795 121 aa14.29□□□□□ -0.12
CAPN1-226ENST00000533820 POM121L12Q8N7R1 296 aa14.29□□□□□ -0.12
CAPN1-226ENST00000533820 TMEM141Q96I45 108 aa14.29□□□□□ -0.12
CAPN1-226ENST00000533820 TRBV27A0A0K0K1C4 114 aa14.28□□□□□ -0.12
CAPN1-226ENST00000533820 IGHV3-30P01768 117 aa14.28□□□□□ -0.12
CAPN1-226ENST00000533820 IGHV3-30-5P0DP03 117 aa14.28□□□□□ -0.12
CAPN1-226ENST00000533820 PAPPA-AS1Q5QFB9 102 aa14.28□□□□□ -0.12
CAPN1-226ENST00000533820 LYRM7Q5U5X0 104 aa14.28□□□□□ -0.12
CAPN1-226ENST00000533820 C10orf126Q8N4M7 172 aa14.28□□□□□ -0.12
CAPN1-226ENST00000533820 A0A0J9YX75 114 aa14.28□□□□□ -0.12
CAPN1-226ENST00000533820 TIMM17AQ99595 171 aa14.28□□□□□ -0.12
CAPN1-226ENST00000533820 SBSPONQ8IVN8 264 aa14.28□□□□□ -0.12
CAPN1-226ENST00000533820 LGALS9O00182 355 aa14.27□□□□□ -0.12
CAPN1-226ENST00000533820 IGHV1OR15-1A0A075B7D0 117 aa14.27□□□□□ -0.13
CAPN1-226ENST00000533820 SLC25A29Q8N8R3 303 aa14.27□□□□□ -0.13
CAPN1-226ENST00000533820 Q9UF83 564 aa14.27□□□□□ -0.13
CAPN1-226ENST00000533820 EPG5Q9HCE0 2579 aa14.26□□□□□ -0.13
CAPN1-226ENST00000533820 PSMB8P28062 276 aa14.26□□□□□ -0.13
CAPN1-226ENST00000533820 HERVK_113P63121 156 aa14.26□□□□□ -0.13
CAPN1-226ENST00000533820 CFHR3Q02985 330 aa14.26□□□□□ -0.13
CAPN1-226ENST00000533820 C9orf85Q96MD7 179 aa14.26□□□□□ -0.13
CAPN1-226ENST00000533820 TEX15Q9BXT5 2789 aa14.25□□□□□ -0.13
CAPN1-226ENST00000533820 AMELXQ99217 191 aa14.25□□□□□ -0.13
CAPN1-226ENST00000533820 BEX4Q9NWD9 120 aaPredicted RBP14.25□□□□□ -0.13
CAPN1-226ENST00000533820 K7EMT4 169 aa14.25□□□□□ -0.13
CAPN1-226ENST00000533820 DEFB136Q30KP8 78 aa14.25□□□□□ -0.13
CAPN1-226ENST00000533820 FBN2P35556 2912 aa14.24□□□□□ -0.13
CAPN1-226ENST00000533820 PRRC2AP48634 2157 aaKnown RBP14.24□□□□□ -0.13
CAPN1-226ENST00000533820 NAV2Q8IVL1 2488 aa14.24□□□□□ -0.13
CAPN1-226ENST00000533820 TMEM101Q96IK0 257 aa14.24□□□□□ -0.13
CAPN1-226ENST00000533820 FAM236AA0A1B0GUQ0 79 aa14.23□□□□□ -0.13
CAPN1-226ENST00000533820 FAM236BA0A1B0GV22 79 aa14.23□□□□□ -0.13
CAPN1-226ENST00000533820 SPANXA1Q9NS26 97 aa14.23□□□□□ -0.13
CAPN1-226ENST00000533820 PRO1854Q9UHT4 67 aa14.23□□□□□ -0.13
CAPN1-226ENST00000533820 K7EQG2 157 aa14.23□□□□□ -0.13
CAPN1-226ENST00000533820 NPC2P61916 151 aa14.23□□□□□ -0.13
CAPN1-226ENST00000533820 Q1RN00 199 aa14.23□□□□□ -0.13
CAPN1-226ENST00000533820 J3KT08 172 aa14.22□□□□□ -0.13
CAPN1-226ENST00000533820 C20orf203Q8NBC4 194 aa14.22□□□□□ -0.13
CAPN1-226ENST00000533820 DUX3Q96PT4 197 aa14.22□□□□□ -0.13
CAPN1-226ENST00000533820 CHD6Q8TD26 2715 aa14.22□□□□□ -0.13
CAPN1-226ENST00000533820 TRAV8-3A0A0A6YYJ7 113 aa14.22□□□□□ -0.13
CAPN1-226ENST00000533820 NDUFA7O95182 113 aa14.22□□□□□ -0.13
CAPN1-226ENST00000533820 PRSS2P07478 247 aa14.22□□□□□ -0.13
CAPN1-226ENST00000533820 RBMY1A1P0DJD3 496 aaKnown RBP14.22□□□□□ -0.13
CAPN1-226ENST00000533820 RBMY1CP0DJD4 496 aa14.22□□□□□ -0.13
CAPN1-226ENST00000533820 ZNF22P17026 224 aaPredicted RBP14.22□□□□□ -0.13
CAPN1-226ENST00000533820 RBMY1FQ15415 496 aaKnown RBP14.22□□□□□ -0.13
CAPN1-226ENST00000533820 MUSTN1Q8IVN3 82 aa14.22□□□□□ -0.13
CAPN1-226ENST00000533820 JMJD1CQ15652 2540 aa14.22□□□□□ -0.13
CAPN1-226ENST00000533820 B4DSR2 109 aa14.21□□□□□ -0.13
CAPN1-226ENST00000533820 TRBV6-5A0A0K0K1A5 114 aa14.21□□□□□ -0.13
CAPN1-226ENST00000533820 A8MZ25 164 aa14.21□□□□□ -0.13
CAPN1-226ENST00000533820 F5H768 121 aa14.21□□□□□ -0.13
CAPN1-226ENST00000533820 EIF4EBP3O60516 100 aaPredicted RBP14.21□□□□□ -0.13
CAPN1-226ENST00000533820 TMEM223A0PJW6 202 aa14.21□□□□□ -0.14
CAPN1-226ENST00000533820 IGLV4-3A0A075B6K6 122 aa14.2□□□□□ -0.14
CAPN1-226ENST00000533820 TRGV11A0A075B6L2 103 aa14.2□□□□□ -0.14
CAPN1-226ENST00000533820 I3L3M4 83 aa14.2□□□□□ -0.14
CAPN1-226ENST00000533820 C18orf65Q6ZTR6 163 aa14.2□□□□□ -0.14
CAPN1-226ENST00000533820 CCDC168Q8NDH2 2452 aa14.2□□□□□ -0.14
CAPN1-226ENST00000533820 WIPF1O43516 503 aa14.2□□□□□ -0.14
CAPN1-226ENST00000533820 CD28P10747 220 aa14.2□□□□□ -0.14
CAPN1-226ENST00000533820 HOXD3P31249 432 aaPredicted RBP14.2□□□□□ -0.14
CAPN1-226ENST00000533820 NF1P21359 2839 aa14.19□□□□□ -0.14
CAPN1-226ENST00000533820 DEFB131AP59861 70 aa14.18□□□□□ -0.14
CAPN1-226ENST00000533820 IGHV3-38A0A0C4DH36 116 aa14.18□□□□□ -0.14
CAPN1-226ENST00000533820 ZNF462Q96JM2 2506 aa14.18□□□□□ -0.14
CAPN1-226ENST00000533820 LEPROTO15243 131 aa14.18□□□□□ -0.14
CAPN1-226ENST00000533820 NSUN5P1Q3KNT7 163 aa14.18□□□□□ -0.14
CAPN1-226ENST00000533820 ELANEP08246 267 aa14.17□□□□□ -0.14
CAPN1-226ENST00000533820 OR13C6PQ8NH95 151 aa14.17□□□□□ -0.14
CAPN1-226ENST00000533820 SLURP1P55000 103 aa14.17□□□□□ -0.14
CAPN1-226ENST00000533820 RHOHQ15669 191 aa14.16□□□□□ -0.14
CAPN1-226ENST00000533820 PRORYQ9H606 182 aa14.16□□□□□ -0.14
CAPN1-226ENST00000533820 KHDC1LQ5JSQ8 128 aa14.16□□□□□ -0.14
CAPN1-226ENST00000533820 IGHV3-30-3P0DP02 117 aa14.15□□□□□ -0.14
CAPN1-226ENST00000533820 Q6ZSN1 163 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms