RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 C17orf112F2Z3M2 114 aa5.91□□□□□ -1.46
CSDE1-215ENST00000533818 SH2D1AO60880 128 aa5.91□□□□□ -1.46
CSDE1-215ENST00000533818 NKX2-5P52952 324 aaPredicted RBP5.91□□□□□ -1.46
CSDE1-215ENST00000533818 PQLC2Q6ZP29 291 aa5.91□□□□□ -1.46
CSDE1-215ENST00000533818 OR10AG1Q8NH19 301 aa5.91□□□□□ -1.46
CSDE1-215ENST00000533818 PGLYRP4Q96LB8 373 aa5.91□□□□□ -1.46
CSDE1-215ENST00000533818 EPDR1Q9UM22 224 aa5.91□□□□□ -1.46
CSDE1-215ENST00000533818 ARL2-SNX15V9GYD0 113 aa5.91□□□□□ -1.46
CSDE1-215ENST00000533818 TRAV34A0A0B4J273 112 aa5.9□□□□□ -1.46
CSDE1-215ENST00000533818 M0QY20 66 aa5.9□□□□□ -1.46
CSDE1-215ENST00000533818 BCL2L11O43521 198 aa5.9□□□□□ -1.46
CSDE1-215ENST00000533818 SMIM17P0DL12 118 aa5.9□□□□□ -1.46
CSDE1-215ENST00000533818 AP3S2P59780 193 aa5.9□□□□□ -1.46
CSDE1-215ENST00000533818 KRTAP6-3Q3LI67 103 aa5.9□□□□□ -1.46
CSDE1-215ENST00000533818 RNASEKQ6P5S7 137 aaKnown RBP5.9□□□□□ -1.46
CSDE1-215ENST00000533818 KRTAP7-1Q8IUC3 87 aa5.9□□□□□ -1.46
CSDE1-215ENST00000533818 WDR61Q9GZS3 305 aaKnown RBP5.9□□□□□ -1.46
CSDE1-215ENST00000533818 LINC00959A0A1B0GUT2 108 aa5.89□□□□□ -1.47
CSDE1-215ENST00000533818 FAM25EA8MYX2 175 aa5.89□□□□□ -1.47
CSDE1-215ENST00000533818 ESDP10768 282 aa5.89□□□□□ -1.47
CSDE1-215ENST00000533818 MALP21145 153 aa5.89□□□□□ -1.47
CSDE1-215ENST00000533818 SSTP61278 116 aa5.89□□□□□ -1.47
CSDE1-215ENST00000533818 SUMO1P63165 101 aaKnown RBP5.89□□□□□ -1.47
CSDE1-215ENST00000533818 NHLH2Q02577 135 aa5.89□□□□□ -1.47
CSDE1-215ENST00000533818 COTL1Q14019 142 aa5.89□□□□□ -1.47
CSDE1-215ENST00000533818 TOMM5Q8N4H5 51 aa5.89□□□□□ -1.47
CSDE1-215ENST00000533818 C2orf48Q96LS8 159 aa5.89□□□□□ -1.47
CSDE1-215ENST00000533818 VCX3AQ9NNX9 186 aa5.89□□□□□ -1.47
CSDE1-215ENST00000533818 IGKV2D-26A0A0A0MRZ7 120 aa5.88□□□□□ -1.47
CSDE1-215ENST00000533818 MUC21A0A140T8X8 626 aa5.88□□□□□ -1.47
CSDE1-215ENST00000533818 RPL28P46779 137 aaKnown RBP5.88□□□□□ -1.47
CSDE1-215ENST00000533818 DEFA3P59666 94 aa5.88□□□□□ -1.47
CSDE1-215ENST00000533818 LINC00242Q5T6M2 205 aa5.88□□□□□ -1.47
CSDE1-215ENST00000533818 CD164L2Q6UWJ8 174 aa5.88□□□□□ -1.47
CSDE1-215ENST00000533818 CTDSP1Q9GZU7 261 aa5.88□□□□□ -1.47
CSDE1-215ENST00000533818 Q9H521 79 aa5.88□□□□□ -1.47
CSDE1-215ENST00000533818 A0A1W2PPV4 95 aa5.87□□□□□ -1.47
CSDE1-215ENST00000533818 HMGB3O15347 200 aaKnown RBP5.87□□□□□ -1.47
CSDE1-215ENST00000533818 FAM229BQ4G0N7 80 aa5.87□□□□□ -1.47
CSDE1-215ENST00000533818 XP32Q5T750 250 aa5.87□□□□□ -1.47
CSDE1-215ENST00000533818 SPANXN1Q5VSR9 72 aa5.87□□□□□ -1.47
CSDE1-215ENST00000533818 IMMP2LQ96T52 175 aa5.87□□□□□ -1.47
CSDE1-215ENST00000533818 NUPR1O60356 82 aa5.86□□□□□ -1.47
CSDE1-215ENST00000533818 MGPP08493 103 aa5.86□□□□□ -1.47
CSDE1-215ENST00000533818 CFC1P0CG37 223 aa5.86□□□□□ -1.47
CSDE1-215ENST00000533818 GAGE2EQ4V326 116 aa5.86□□□□□ -1.47
CSDE1-215ENST00000533818 OR2D3Q8NGH3 330 aa5.86□□□□□ -1.47
CSDE1-215ENST00000533818 GAGE2DQ9UEU5 116 aa5.86□□□□□ -1.47
CSDE1-215ENST00000533818 IGLV8-61A0A075B6I0 122 aa5.85□□□□□ -1.47
CSDE1-215ENST00000533818 ARL14EPLP0DKL9 152 aa5.85□□□□□ -1.47
CSDE1-215ENST00000533818 KRTAP20-1Q3LI63 56 aa5.85□□□□□ -1.47
CSDE1-215ENST00000533818 SUMO4Q6EEV6 95 aa5.85□□□□□ -1.47
CSDE1-215ENST00000533818 UBE2D4Q9Y2X8 147 aa5.85□□□□□ -1.47
CSDE1-215ENST00000533818 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.84□□□□□ -1.47
CSDE1-215ENST00000533818 IGKV2-29A2NJV5 120 aaPredicted RBP5.84□□□□□ -1.47
CSDE1-215ENST00000533818 COX7A2LO14548 114 aa5.84□□□□□ -1.47
CSDE1-215ENST00000533818 NDUFB6O95139 128 aa5.84□□□□□ -1.47
CSDE1-215ENST00000533818 LRRC37A5PQ49AS3 106 aa5.84□□□□□ -1.47
CSDE1-215ENST00000533818 RASL11AQ6T310 242 aa5.84□□□□□ -1.47
CSDE1-215ENST00000533818 COX6B2Q6YFQ2 88 aa5.84□□□□□ -1.47
CSDE1-215ENST00000533818 Q86TA4 180 aa5.84□□□□□ -1.47
CSDE1-215ENST00000533818 AP1S3Q96PC3 154 aa5.84□□□□□ -1.47
CSDE1-215ENST00000533818 RAB32Q13637 225 aa5.83□□□□□ -1.48
CSDE1-215ENST00000533818 SPAG11AQ6PDA7 123 aa5.83□□□□□ -1.48
CSDE1-215ENST00000533818 COX8CQ7Z4L0 72 aa5.83□□□□□ -1.48
CSDE1-215ENST00000533818 DAND5Q8N907 189 aa5.83□□□□□ -1.48
CSDE1-215ENST00000533818 DEDD2Q8WXF8 326 aa5.83□□□□□ -1.48
CSDE1-215ENST00000533818 KIR2DL4Q99706 377 aa5.83□□□□□ -1.48
CSDE1-215ENST00000533818 RBM38Q9H0Z9 239 aaKnown RBP5.83□□□□□ -1.48
CSDE1-215ENST00000533818 NIT2Q9NQR4 276 aa5.83□□□□□ -1.48
CSDE1-215ENST00000533818 MRPL35Q9NZE8 188 aaKnown RBP5.83□□□□□ -1.48
CSDE1-215ENST00000533818 FLGP20930 4061 aaPredicted RBP5.83□□□□□ -1.48
CSDE1-215ENST00000533818 A0A087WXM4 84 aa5.82□□□□□ -1.48
CSDE1-215ENST00000533818 H7C423 109 aa5.82□□□□□ -1.48
CSDE1-215ENST00000533818 SNAI2O43623 268 aa5.82□□□□□ -1.48
CSDE1-215ENST00000533818 TNFRSF6BO95407 300 aa5.82□□□□□ -1.48
CSDE1-215ENST00000533818 TLX1NBP0CAT3 122 aa5.82□□□□□ -1.48
CSDE1-215ENST00000533818 TMEM101Q96IK0 257 aa5.82□□□□□ -1.48
CSDE1-215ENST00000533818 BTF3L4Q96K17 158 aa5.82□□□□□ -1.48
CSDE1-215ENST00000533818 ZFP30Q9Y2G7 519 aa5.82□□□□□ -1.48
CSDE1-215ENST00000533818 NEBP20929 6669 aa5.82□□□□□ -1.48
CSDE1-215ENST00000533818 BCE1O60756 84 aa5.81□□□□□ -1.48
CSDE1-215ENST00000533818 ZNF25P17030 456 aaPredicted RBP5.81□□□□□ -1.48
CSDE1-215ENST00000533818 GCHFRP30047 84 aa5.81□□□□□ -1.48
CSDE1-215ENST00000533818 SPAG11BQ08648 103 aa5.81□□□□□ -1.48
CSDE1-215ENST00000533818 PYDC2Q56P42 97 aa5.81□□□□□ -1.48
CSDE1-215ENST00000533818 PCOTHQ58A44 107 aa5.81□□□□□ -1.48
CSDE1-215ENST00000533818 SMDT1Q9H4I9 107 aa5.81□□□□□ -1.48
CSDE1-215ENST00000533818 G3V3Q6 166 aa5.8□□□□□ -1.48
CSDE1-215ENST00000533818 OR5AL1P0C617 328 aa5.8□□□□□ -1.48
CSDE1-215ENST00000533818 NTF3P20783 257 aa5.8□□□□□ -1.48
CSDE1-215ENST00000533818 SCGB1C1Q8TD33 95 aa5.8□□□□□ -1.48
CSDE1-215ENST00000533818 IL15RAQ13261 267 aa5.79□□□□□ -1.48
CSDE1-215ENST00000533818 TMEM241Q24JQ0 296 aa5.79□□□□□ -1.48
CSDE1-215ENST00000533818 C10orf25Q5T742 122 aa5.79□□□□□ -1.48
CSDE1-215ENST00000533818 Q6ZNX1 250 aa5.79□□□□□ -1.48
CSDE1-215ENST00000533818 PEX7O00628 323 aa5.78□□□□□ -1.48
CSDE1-215ENST00000533818 NDUFA1O15239 70 aa5.78□□□□□ -1.48
CSDE1-215ENST00000533818 CXCL1P09341 107 aa5.78□□□□□ -1.48
CSDE1-215ENST00000533818 C5orf38Q86SI9 138 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms