RNA–Protein interactions for RNA: ENST00000533145.5

HIF3A-215, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-215ENST00000533145 KLK5Q9Y337 293 aaPredicted RBP9.76□□□□□ -0.85
HIF3A-215ENST00000533145 NDUFA6P56556 154 aa9.75□□□□□ -0.85
HIF3A-215ENST00000533145 LINC00310P59036 64 aa9.75□□□□□ -0.85
HIF3A-215ENST00000533145 LAGE3Q14657 143 aa9.75□□□□□ -0.85
HIF3A-215ENST00000533145 ORMDL2Q53FV1 153 aa9.75□□□□□ -0.85
HIF3A-215ENST00000533145 MUC7Q8TAX7 377 aa9.75□□□□□ -0.85
HIF3A-215ENST00000533145 KMT2CQ8NEZ4 4911 aaKnown RBP9.75□□□□□ -0.85
HIF3A-215ENST00000533145 SERF1AO75920 110 aa9.74□□□□□ -0.85
HIF3A-215ENST00000533145 NUDT3O95989 172 aa9.74□□□□□ -0.85
HIF3A-215ENST00000533145 LYPD5Q6UWN5 251 aa9.74□□□□□ -0.85
HIF3A-215ENST00000533145 APLNQ9ULZ1 77 aa9.74□□□□□ -0.85
HIF3A-215ENST00000533145 TRBV6-8A0A0A6YYG3 113 aa9.73□□□□□ -0.85
HIF3A-215ENST00000533145 NUPR1O60356 82 aa9.73□□□□□ -0.85
HIF3A-215ENST00000533145 G0S2P27469 103 aa9.73□□□□□ -0.85
HIF3A-215ENST00000533145 FCER1GP30273 86 aa9.73□□□□□ -0.85
HIF3A-215ENST00000533145 CHCHD7Q9BUK0 85 aa9.73□□□□□ -0.85
HIF3A-215ENST00000533145 LELP1Q5T871 98 aa9.72□□□□□ -0.85
HIF3A-215ENST00000533145 RNASEKQ6P5S7 137 aaKnown RBP9.72□□□□□ -0.85
HIF3A-215ENST00000533145 RYR3Q15413 4870 aa9.72□□□□□ -0.85
HIF3A-215ENST00000533145 TRBV25-1A0A075B6N4 114 aa9.71□□□□□ -0.86
HIF3A-215ENST00000533145 IGHV1-24A0A0C4DH33 117 aa9.71□□□□□ -0.86
HIF3A-215ENST00000533145 LINC01549A6NIU2 74 aa9.71□□□□□ -0.86
HIF3A-215ENST00000533145 H7C423 109 aa9.71□□□□□ -0.86
HIF3A-215ENST00000533145 HSBP1O75506 76 aa9.71□□□□□ -0.86
HIF3A-215ENST00000533145 S100A6P06703 90 aa9.71□□□□□ -0.86
HIF3A-215ENST00000533145 ESRGQ1W209 222 aa9.71□□□□□ -0.86
HIF3A-215ENST00000533145 C20orf203Q8NBC4 194 aa9.71□□□□□ -0.86
HIF3A-215ENST00000533145 A0A096LNJ9 63 aa9.7□□□□□ -0.86
HIF3A-215ENST00000533145 C5orf52A6NGY3 159 aa9.7□□□□□ -0.86
HIF3A-215ENST00000533145 AMTP48728 403 aa9.7□□□□□ -0.86
HIF3A-215ENST00000533145 DEFB104AQ8WTQ1 72 aa9.7□□□□□ -0.86
HIF3A-215ENST00000533145 TMEM18Q96B42 140 aa9.7□□□□□ -0.86
HIF3A-215ENST00000533145 TMEM243Q9BU79 118 aa9.7□□□□□ -0.86
HIF3A-215ENST00000533145 DNAH7Q8WXX0 4024 aa9.69□□□□□ -0.86
HIF3A-215ENST00000533145 DYNC2H1Q8NCM8 4307 aaKnown RBP9.69□□□□□ -0.86
HIF3A-215ENST00000533145 TOMM6Q96B49 74 aa9.69□□□□□ -0.86
HIF3A-215ENST00000533145 PACRGQ96M98 296 aaPredicted RBP9.69□□□□□ -0.86
HIF3A-215ENST00000533145 C3orf84H3BNL1 204 aa9.68□□□□□ -0.86
HIF3A-215ENST00000533145 HBDP02042 147 aa9.68□□□□□ -0.86
HIF3A-215ENST00000533145 C2orf66Q6UXQ4 117 aa9.68□□□□□ -0.86
HIF3A-215ENST00000533145 CYSLTR1Q9Y271 337 aa9.68□□□□□ -0.86
HIF3A-215ENST00000533145 CCL18P55774 89 aa9.67□□□□□ -0.86
HIF3A-215ENST00000533145 SNRPEP62304 92 aaKnown RBP9.67□□□□□ -0.86
HIF3A-215ENST00000533145 PDZD11Q5EBL8 140 aa9.67□□□□□ -0.86
HIF3A-215ENST00000533145 ZFAND6Q6FIF0 208 aa9.67□□□□□ -0.86
HIF3A-215ENST00000533145 MRPL52Q86TS9 123 aaKnown RBP9.67□□□□□ -0.86
HIF3A-215ENST00000533145 FAM19A2Q8N3H0 131 aa9.67□□□□□ -0.86
HIF3A-215ENST00000533145 TIMM21Q9BVV7 248 aa9.67□□□□□ -0.86
HIF3A-215ENST00000533145 TMA7Q9Y2S6 64 aaKnown RBP9.67□□□□□ -0.86
HIF3A-215ENST00000533145 PYGO1Q9Y3Y4 419 aa9.67□□□□□ -0.86
HIF3A-215ENST00000533145 CSDC2Q9Y534 153 aaKnown RBP9.67□□□□□ -0.86
HIF3A-215ENST00000533145 TRAV8-6A0A0B4J262 113 aa9.66□□□□□ -0.86
HIF3A-215ENST00000533145 BTF3P20290 206 aaKnown RBP9.66□□□□□ -0.86
HIF3A-215ENST00000533145 PKIAP61925 76 aa9.66□□□□□ -0.86
HIF3A-215ENST00000533145 SMAGPQ0VAQ4 97 aa9.66□□□□□ -0.86
HIF3A-215ENST00000533145 HIST3H2BBQ8N257 126 aa9.66□□□□□ -0.86
HIF3A-215ENST00000533145 UPK3BQ9BT76 320 aa9.66□□□□□ -0.86
HIF3A-215ENST00000533145 MRPS16Q9Y3D3 137 aaKnown RBP9.66□□□□□ -0.86
HIF3A-215ENST00000533145 LINC00588Q9Y4M8 146 aa9.66□□□□□ -0.86
HIF3A-215ENST00000533145 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.65□□□□□ -0.86
HIF3A-215ENST00000533145 A0A1B0GUV1 79 aa9.65□□□□□ -0.86
HIF3A-215ENST00000533145 IGKV2-29A2NJV5 120 aaPredicted RBP9.65□□□□□ -0.86
HIF3A-215ENST00000533145 NPSP0C0P6 89 aa9.65□□□□□ -0.86
HIF3A-215ENST00000533145 RPL39P62891 51 aaKnown RBP9.65□□□□□ -0.86
HIF3A-215ENST00000533145 PMCHL1Q16048 86 aa9.65□□□□□ -0.86
HIF3A-215ENST00000533145 ERASQ7Z444 233 aa9.65□□□□□ -0.86
HIF3A-215ENST00000533145 CHCHD5Q9BSY4 110 aa9.65□□□□□ -0.86
HIF3A-215ENST00000533145 UBE2D4Q9Y2X8 147 aa9.65□□□□□ -0.86
HIF3A-215ENST00000533145 CSMD3Q7Z407 3707 aa9.65□□□□□ -0.87
HIF3A-215ENST00000533145 IGIPA6NJ69 53 aa9.64□□□□□ -0.87
HIF3A-215ENST00000533145 UBE2L6O14933 153 aa9.64□□□□□ -0.87
HIF3A-215ENST00000533145 ZNF25P17030 456 aaPredicted RBP9.64□□□□□ -0.87
HIF3A-215ENST00000533145 CASC10Q5T4H9 136 aa9.64□□□□□ -0.87
HIF3A-215ENST00000533145 TIMM17AQ99595 171 aa9.64□□□□□ -0.87
HIF3A-215ENST00000533145 SPANXA1Q9NS26 97 aa9.64□□□□□ -0.87
HIF3A-215ENST00000533145 LEPROTL1O95214 131 aa9.63□□□□□ -0.87
HIF3A-215ENST00000533145 FGF6P10767 208 aa9.63□□□□□ -0.87
HIF3A-215ENST00000533145 TMEM141Q96I45 108 aa9.63□□□□□ -0.87
HIF3A-215ENST00000533145 SCGB3A1Q96QR1 104 aa9.63□□□□□ -0.87
HIF3A-215ENST00000533145 ATP5LO75964 103 aa9.62□□□□□ -0.87
HIF3A-215ENST00000533145 MRPS36P82909 103 aaKnown RBP9.62□□□□□ -0.87
HIF3A-215ENST00000533145 GAGE6Q13070 117 aa9.62□□□□□ -0.87
HIF3A-215ENST00000533145 FAM104AQ969W3 186 aa9.62□□□□□ -0.87
HIF3A-215ENST00000533145 TMEM262E9PQX1 116 aa9.61□□□□□ -0.87
HIF3A-215ENST00000533145 S100A2P29034 98 aa9.61□□□□□ -0.87
HIF3A-215ENST00000533145 HSPB8Q9UJY1 196 aa9.61□□□□□ -0.87
HIF3A-215ENST00000533145 IFITM10A6NMD0 228 aa9.6□□□□□ -0.87
HIF3A-215ENST00000533145 DNAH10OSP0CZ25 163 aa9.6□□□□□ -0.87
HIF3A-215ENST00000533145 RBX1P62877 108 aa9.6□□□□□ -0.87
HIF3A-215ENST00000533145 LINC01556Q5JQF7 62 aa9.6□□□□□ -0.87
HIF3A-215ENST00000533145 AMMECR1LQ6DCA0 310 aa9.6□□□□□ -0.87
HIF3A-215ENST00000533145 WFDC10BQ8IUB3 73 aa9.6□□□□□ -0.87
HIF3A-215ENST00000533145 IFI27L1Q96BM0 104 aa9.6□□□□□ -0.87
HIF3A-215ENST00000533145 TMEM101Q96IK0 257 aa9.6□□□□□ -0.87
HIF3A-215ENST00000533145 HIST1H2BLQ99880 126 aa9.6□□□□□ -0.87
HIF3A-215ENST00000533145 CDC42SE2Q9NRR3 84 aa9.6□□□□□ -0.87
HIF3A-215ENST00000533145 IGLV4-60A0A075B6I1 120 aa9.59□□□□□ -0.87
HIF3A-215ENST00000533145 IGLV4-3A0A075B6K6 122 aa9.59□□□□□ -0.87
HIF3A-215ENST00000533145 A0A087WX48 190 aa9.59□□□□□ -0.87
HIF3A-215ENST00000533145 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 238.5 ms