RNA–Protein interactions for RNA: ENST00000532844.5

CTNND1-234, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-234ENST00000532844 DEFB135Q30KP9 77 aa6.18□□□□□ -1.42
CTNND1-234ENST00000532844 UNQ9165/PRO28630Q6UXU0 137 aa6.18□□□□□ -1.42
CTNND1-234ENST00000532844 BRWD1-AS2P59051 145 aa6.17□□□□□ -1.42
CTNND1-234ENST00000532844 DAZAP2Q15038 168 aaPredicted RBP6.17□□□□□ -1.42
CTNND1-234ENST00000532844 ZFAND3Q9H8U3 227 aa6.17□□□□□ -1.42
CTNND1-234ENST00000532844 CNOT1A5YKK6 2376 aaKnown RBP6.17□□□□□ -1.42
CTNND1-234ENST00000532844 UBE2D3P61077 147 aa6.17□□□□□ -1.42
CTNND1-234ENST00000532844 PKDREJQ9NTG1 2253 aa6.17□□□□□ -1.42
CTNND1-234ENST00000532844 GVINP1Q7Z2Y8 2422 aa6.17□□□□□ -1.42
CTNND1-234ENST00000532844 DEFB4AO15263 64 aa6.17□□□□□ -1.42
CTNND1-234ENST00000532844 SPATA12Q7Z6I5 190 aa6.17□□□□□ -1.42
CTNND1-234ENST00000532844 C4orf3Q8WVX3 66 aa6.17□□□□□ -1.42
CTNND1-234ENST00000532844 WNK2Q9Y3S1 2297 aa6.17□□□□□ -1.42
CTNND1-234ENST00000532844 NUP210LQ5VU65 1888 aa6.17□□□□□ -1.42
CTNND1-234ENST00000532844 USF3Q68DE3 2245 aa6.17□□□□□ -1.42
CTNND1-234ENST00000532844 TNRC6AQ8NDV7 1962 aaKnown RBP6.17□□□□□ -1.42
CTNND1-234ENST00000532844 CCDC179H3BU77 68 aa6.16□□□□□ -1.42
CTNND1-234ENST00000532844 LINC00694P0DN24 101 aa6.16□□□□□ -1.42
CTNND1-234ENST00000532844 C1orf229Q6ZS94 237 aaPredicted RBP6.16□□□□□ -1.42
CTNND1-234ENST00000532844 ZNF295-AS1Q8N0V1 137 aa6.16□□□□□ -1.42
CTNND1-234ENST00000532844 HIGD2AQ9BW72 106 aa6.16□□□□□ -1.42
CTNND1-234ENST00000532844 COL6A6A6NMZ7 2263 aa6.16□□□□□ -1.42
CTNND1-234ENST00000532844 Q8NA96 180 aa6.16□□□□□ -1.42
CTNND1-234ENST00000532844 TRBV7-3A0A075B6L6 115 aa6.16□□□□□ -1.42
CTNND1-234ENST00000532844 IGLV2-8P01709 118 aa6.16□□□□□ -1.42
CTNND1-234ENST00000532844 A0A087WZ39 114 aa6.16□□□□□ -1.42
CTNND1-234ENST00000532844 CHD3Q12873 2000 aaKnown RBP6.16□□□□□ -1.42
CTNND1-234ENST00000532844 NFE4Q86UQ8 179 aa6.16□□□□□ -1.42
CTNND1-234ENST00000532844 CCDC140Q96MF4 163 aa6.16□□□□□ -1.42
CTNND1-234ENST00000532844 MDFICQ9P1T7 246 aa6.16□□□□□ -1.42
CTNND1-234ENST00000532844 LINC00322Q6ZN03 302 aaPredicted RBP6.15□□□□□ -1.42
CTNND1-234ENST00000532844 C9orf85Q96MD7 179 aa6.15□□□□□ -1.42
CTNND1-234ENST00000532844 A0A1B0GXF2 115 aa6.15□□□□□ -1.42
CTNND1-234ENST00000532844 A6NDX4 124 aa6.15□□□□□ -1.42
CTNND1-234ENST00000532844 INAFM1C9JVW0 142 aa6.15□□□□□ -1.42
CTNND1-234ENST00000532844 ZNF80P51504 273 aaPredicted RBP6.15□□□□□ -1.42
CTNND1-234ENST00000532844 HHLA3Q9XRX5 114 aa6.15□□□□□ -1.42
CTNND1-234ENST00000532844 ODF3BA8MYP8 253 aa6.15□□□□□ -1.42
CTNND1-234ENST00000532844 ROS1P08922 2347 aa6.15□□□□□ -1.43
CTNND1-234ENST00000532844 TMEM89A2RUT3 159 aa6.15□□□□□ -1.43
CTNND1-234ENST00000532844 EIF4EBP1Q13541 118 aaPredicted RBP6.15□□□□□ -1.43
CTNND1-234ENST00000532844 LINC00574Q9H8X3 128 aa6.15□□□□□ -1.43
CTNND1-234ENST00000532844 A0A096LNI7 61 aa6.14□□□□□ -1.43
CTNND1-234ENST00000532844 GDF5OSQ5U4N7 250 aa6.14□□□□□ -1.43
CTNND1-234ENST00000532844 UFSP1Q6NVU6 142 aa6.14□□□□□ -1.43
CTNND1-234ENST00000532844 WFDC10AQ9H1F0 79 aa6.14□□□□□ -1.43
CTNND1-234ENST00000532844 CLUHP3Q96NS8 147 aa6.14□□□□□ -1.43
CTNND1-234ENST00000532844 COL4A4P53420 1690 aaPredicted RBP6.14□□□□□ -1.43
CTNND1-234ENST00000532844 FBXL19-AS1Q494R0 122 aa6.14□□□□□ -1.43
CTNND1-234ENST00000532844 CREBBPQ92793 2442 aa6.14□□□□□ -1.43
CTNND1-234ENST00000532844 A0A0J9YX75 114 aa6.14□□□□□ -1.43
CTNND1-234ENST00000532844 CCKP06307 115 aa6.14□□□□□ -1.43
CTNND1-234ENST00000532844 MIFP14174 115 aa6.13□□□□□ -1.43
CTNND1-234ENST00000532844 KLK12Q9UKR0 248 aa6.13□□□□□ -1.43
CTNND1-234ENST00000532844 ACACAQ13085 2346 aa6.13□□□□□ -1.43
CTNND1-234ENST00000532844 SHANK1Q9Y566 2161 aa6.13□□□□□ -1.43
CTNND1-234ENST00000532844 LINC01548A6NM66 108 aa6.13□□□□□ -1.43
CTNND1-234ENST00000532844 NANOS2P60321 138 aaKnown RBP6.13□□□□□ -1.43
CTNND1-234ENST00000532844 SOSTDC1Q6X4U4 206 aa6.13□□□□□ -1.43
CTNND1-234ENST00000532844 WFDC13Q8IUB5 93 aa6.13□□□□□ -1.43
CTNND1-234ENST00000532844 M0R2N4 97 aa6.13□□□□□ -1.43
CTNND1-234ENST00000532844 RBX1P62877 108 aa6.13□□□□□ -1.43
CTNND1-234ENST00000532844 TP53TG3Q9ULZ0 132 aa6.13□□□□□ -1.43
CTNND1-234ENST00000532844 CACNA1GO43497 2377 aa6.13□□□□□ -1.43
CTNND1-234ENST00000532844 A0A0J9YXY3 114 aa6.13□□□□□ -1.43
CTNND1-234ENST00000532844 Q6Q795 121 aa6.13□□□□□ -1.43
CTNND1-234ENST00000532844 TNRC6BQ9UPQ9 1833 aaKnown RBP6.13□□□□□ -1.43
CTNND1-234ENST00000532844 NUPR2A6NF83 97 aa6.13□□□□□ -1.43
CTNND1-234ENST00000532844 FAM19A1Q7Z5A9 133 aa6.13□□□□□ -1.43
CTNND1-234ENST00000532844 TMEM263Q8WUH6 116 aaKnown RBP6.13□□□□□ -1.43
CTNND1-234ENST00000532844 GTF3C1Q12789 2109 aa6.13□□□□□ -1.43
CTNND1-234ENST00000532844 GPR179Q6PRD1 2367 aa6.12□□□□□ -1.43
CTNND1-234ENST00000532844 PCNX2A6NKB5 2137 aa6.12□□□□□ -1.43
CTNND1-234ENST00000532844 CEMP1Q6PRD7 247 aaPredicted RBP6.12□□□□□ -1.43
CTNND1-234ENST00000532844 C1orf158Q8N1D5 194 aa6.12□□□□□ -1.43
CTNND1-234ENST00000532844 C20orf203Q8NBC4 194 aa6.12□□□□□ -1.43
CTNND1-234ENST00000532844 MAP6D1Q9H9H5 199 aa6.12□□□□□ -1.43
CTNND1-234ENST00000532844 MRPS12O15235 138 aaKnown RBP6.12□□□□□ -1.43
CTNND1-234ENST00000532844 SLPIP03973 132 aa6.12□□□□□ -1.43
CTNND1-234ENST00000532844 P0DMU3 169 aa6.12□□□□□ -1.43
CTNND1-234ENST00000532844 FAM231AP0DMU4 169 aa6.12□□□□□ -1.43
CTNND1-234ENST00000532844 FAM231CP0DMU5 169 aa6.12□□□□□ -1.43
CTNND1-234ENST00000532844 SPTAN1Q13813 2472 aaKnown RBP6.12□□□□□ -1.43
CTNND1-234ENST00000532844 MALRD1Q5VYJ5 2156 aa6.11□□□□□ -1.43
CTNND1-234ENST00000532844 EBI3Q14213 229 aa6.11□□□□□ -1.43
CTNND1-234ENST00000532844 C22orf34Q6ZV56 151 aa6.11□□□□□ -1.43
CTNND1-234ENST00000532844 DYSFO75923 2080 aa6.11□□□□□ -1.43
CTNND1-234ENST00000532844 MED13Q9UHV7 2174 aa6.11□□□□□ -1.43
CTNND1-234ENST00000532844 PLA2G2AP14555 144 aa6.11□□□□□ -1.43
CTNND1-234ENST00000532844 IGHV4-30-4P0DP06 118 aa6.11□□□□□ -1.43
CTNND1-234ENST00000532844 IGHV4-31P0DP07 118 aa6.11□□□□□ -1.43
CTNND1-234ENST00000532844 UBE2D2P62837 147 aa6.11□□□□□ -1.43
CTNND1-234ENST00000532844 TRBV30A0A0K0K1B3 111 aa6.1□□□□□ -1.43
CTNND1-234ENST00000532844 CRYGDP07320 174 aa6.1□□□□□ -1.43
CTNND1-234ENST00000532844 C3orf84H3BNL1 204 aa6.1□□□□□ -1.43
CTNND1-234ENST00000532844 LMO4P61968 165 aa6.1□□□□□ -1.43
CTNND1-234ENST00000532844 TP73-AS1Q9UF72 201 aa6.1□□□□□ -1.43
CTNND1-234ENST00000532844 MUC22E2RYF6 1773 aaPredicted RBP6.1□□□□□ -1.43
CTNND1-234ENST00000532844 C19orf84I3L1E1 186 aa6.1□□□□□ -1.43
CTNND1-234ENST00000532844 DNAJC9-AS1A6NH13 148 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 476 ms