RNA–Protein interactions for RNA: ENST00000531594.1

RC3H1-206, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 303 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-206ENST00000531594 PPP1R17O96001 155 aa-0.72□□□□□ -2.52
RC3H1-206ENST00000531594 TNFP01375 233 aa-0.72□□□□□ -2.52
RC3H1-206ENST00000531594 IL5P05113 134 aa-0.72□□□□□ -2.52
RC3H1-206ENST00000531594 SCTP09683 121 aa-0.72□□□□□ -2.52
RC3H1-206ENST00000531594 SPRR2EP22531 72 aa-0.72□□□□□ -2.52
RC3H1-206ENST00000531594 ZNF818PQ6ZRF7 136 aa-0.72□□□□□ -2.52
RC3H1-206ENST00000531594 SMIM4Q8WVI0 70 aa-0.72□□□□□ -2.52
RC3H1-206ENST00000531594 PSMG3Q9BT73 122 aaPredicted RBP-0.72□□□□□ -2.52
RC3H1-206ENST00000531594 AGPAT4-IT1Q9H0P7 198 aa-0.72□□□□□ -2.52
RC3H1-206ENST00000531594 SMPXQ9UHP9 88 aa-0.72□□□□□ -2.52
RC3H1-206ENST00000531594 V9GYQ6 96 aa-0.72□□□□□ -2.52
RC3H1-206ENST00000531594 AKAP11Q9UKA4 1901 aa-0.72□□□□□ -2.53
RC3H1-206ENST00000531594 ARHGEF10O15013 1369 aa-0.72□□□□□ -2.53
RC3H1-206ENST00000531594 PKHD1P08F94 4074 aa-0.73□□□□□ -2.53
RC3H1-206ENST00000531594 TGP01266 2768 aa-0.73□□□□□ -2.53
RC3H1-206ENST00000531594 PLXNA2O75051 1894 aa-0.73□□□□□ -2.53
RC3H1-206ENST00000531594 HECTD1Q9ULT8 2610 aa-0.73□□□□□ -2.53
RC3H1-206ENST00000531594 ZCCHC11Q5TAX3 1644 aaKnown RBP-0.73□□□□□ -2.53
RC3H1-206ENST00000531594 A0A1B0GX51 115 aa-0.73□□□□□ -2.53
RC3H1-206ENST00000531594 TSTD3H0UI37 97 aa-0.73□□□□□ -2.53
RC3H1-206ENST00000531594 PIPP12273 146 aaPredicted RBP-0.73□□□□□ -2.53
RC3H1-206ENST00000531594 CBLN1P23435 193 aa-0.73□□□□□ -2.53
RC3H1-206ENST00000531594 RRAS2P62070 204 aaPredicted RBP-0.73□□□□□ -2.53
RC3H1-206ENST00000531594 TMEM170BQ5T4T1 132 aa-0.73□□□□□ -2.53
RC3H1-206ENST00000531594 MMGT1Q8N4V1 131 aa-0.73□□□□□ -2.53
RC3H1-206ENST00000531594 CENPHQ9H3R5 247 aa-0.73□□□□□ -2.53
RC3H1-206ENST00000531594 GINS2Q9Y248 185 aa-0.73□□□□□ -2.53
RC3H1-206ENST00000531594 HSPB11Q9Y547 144 aa-0.73□□□□□ -2.53
RC3H1-206ENST00000531594 C2CD3Q4AC94 2353 aa-0.73□□□□□ -2.53
RC3H1-206ENST00000531594 CSPG4Q6UVK1 2322 aa-0.73□□□□□ -2.53
RC3H1-206ENST00000531594 WNK1Q9H4A3 2382 aa-0.74□□□□□ -2.53
RC3H1-206ENST00000531594 SYNJ1O43426 1573 aa-0.74□□□□□ -2.53
RC3H1-206ENST00000531594 LRP6O75581 1613 aa-0.74□□□□□ -2.53
RC3H1-206ENST00000531594 ITPR3Q14573 2671 aa-0.74□□□□□ -2.53
RC3H1-206ENST00000531594 FAM236AA0A1B0GUQ0 79 aa-0.74□□□□□ -2.53
RC3H1-206ENST00000531594 FAM236BA0A1B0GV22 79 aa-0.74□□□□□ -2.53
RC3H1-206ENST00000531594 H0YJX3 145 aa-0.74□□□□□ -2.53
RC3H1-206ENST00000531594 CCL18P55774 89 aa-0.74□□□□□ -2.53
RC3H1-206ENST00000531594 KRTAP6-2Q3LI66 62 aa-0.74□□□□□ -2.53
RC3H1-206ENST00000531594 Q6JHZ5 121 aa-0.74□□□□□ -2.53
RC3H1-206ENST00000531594 SPTSSAQ969W0 71 aa-0.74□□□□□ -2.53
RC3H1-206ENST00000531594 SDF2Q99470 211 aa-0.74□□□□□ -2.53
RC3H1-206ENST00000531594 SEC11CQ9BY50 192 aa-0.74□□□□□ -2.53
RC3H1-206ENST00000531594 PRKDCP78527 4128 aaKnown RBP-0.74□□□□□ -2.53
RC3H1-206ENST00000531594 MUC17Q685J3 4493 aa-0.74□□□□□ -2.53
RC3H1-206ENST00000531594 USP9YO00507 2555 aaPredicted RBP-0.75□□□□□ -2.53
RC3H1-206ENST00000531594 ATRQ13535 2644 aa-0.75□□□□□ -2.53
RC3H1-206ENST00000531594 IGLC6P0CF74 106 aa-0.75□□□□□ -2.53
RC3H1-206ENST00000531594 SMIM15Q7Z3B0 74 aa-0.75□□□□□ -2.53
RC3H1-206ENST00000531594 DDA1Q9BW61 102 aa-0.75□□□□□ -2.53
RC3H1-206ENST00000531594 WDR7Q9Y4E6 1490 aa-0.75□□□□□ -2.53
RC3H1-206ENST00000531594 TEP1Q99973 2627 aaKnown RBP-0.75□□□□□ -2.53
RC3H1-206ENST00000531594 LAMC1P11047 1609 aa-0.75□□□□□ -2.53
RC3H1-206ENST00000531594 IFT172Q9UG01 1749 aa-0.75□□□□□ -2.53
RC3H1-206ENST00000531594 ARFGEF1Q9Y6D6 1849 aa-0.75□□□□□ -2.53
RC3H1-206ENST00000531594 PITX3O75364 302 aa-0.76□□□□□ -2.53
RC3H1-206ENST00000531594 NDUFB6O95139 128 aa-0.76□□□□□ -2.53
RC3H1-206ENST00000531594 DBIP07108 87 aaKnown RBP-0.76□□□□□ -2.53
RC3H1-206ENST00000531594 CCL8P80075 99 aa-0.76□□□□□ -2.53
RC3H1-206ENST00000531594 CCDC153Q494R4 210 aa-0.76□□□□□ -2.53
RC3H1-206ENST00000531594 C10orf128Q5T292 105 aa-0.76□□□□□ -2.53
RC3H1-206ENST00000531594 DEFB105AQ8NG35 78 aa-0.76□□□□□ -2.53
RC3H1-206ENST00000531594 MRPL40Q9NQ50 206 aaKnown RBP-0.76□□□□□ -2.53
RC3H1-206ENST00000531594 USF3Q68DE3 2245 aa-0.76□□□□□ -2.53
RC3H1-206ENST00000531594 FASNP49327 2511 aaKnown RBP-0.77□□□□□ -2.53
RC3H1-206ENST00000531594 MUC22E2RYF6 1773 aaPredicted RBP-0.77□□□□□ -2.53
RC3H1-206ENST00000531594 HCG22E2RYF7 251 aa-0.77□□□□□ -2.53
RC3H1-206ENST00000531594 J3QR89 54 aa-0.77□□□□□ -2.53
RC3H1-206ENST00000531594 NEFHP12036 1026 aa-0.77□□□□□ -2.53
RC3H1-206ENST00000531594 HIST1H1AQ02539 215 aaPredicted RBP-0.77□□□□□ -2.53
RC3H1-206ENST00000531594 Q6ZUT4 128 aa-0.77□□□□□ -2.53
RC3H1-206ENST00000531594 AQP10Q96PS8 301 aa-0.77□□□□□ -2.53
RC3H1-206ENST00000531594 SPANXCQ9NY87 97 aa-0.77□□□□□ -2.53
RC3H1-206ENST00000531594 V9GYH0 126 aa-0.77□□□□□ -2.53
RC3H1-206ENST00000531594 CNOT1A5YKK6 2376 aaKnown RBP-0.78□□□□□ -2.53
RC3H1-206ENST00000531594 CASKIN1Q8WXD9 1431 aa-0.78□□□□□ -2.53
RC3H1-206ENST00000531594 SIX6O95475 246 aa-0.78□□□□□ -2.53
RC3H1-206ENST00000531594 LINC00694P0DN24 101 aa-0.78□□□□□ -2.53
RC3H1-206ENST00000531594 BAGE2Q86Y30 109 aa-0.78□□□□□ -2.53
RC3H1-206ENST00000531594 SMIM3Q9BZL3 60 aa-0.78□□□□□ -2.53
RC3H1-206ENST00000531594 DAPK1P53355 1430 aa-0.79□□□□□ -2.54
RC3H1-206ENST00000531594 SPTBN1Q01082 2364 aaKnown RBP-0.79□□□□□ -2.54
RC3H1-206ENST00000531594 WNK3Q9BYP7 1800 aa-0.79□□□□□ -2.54
RC3H1-206ENST00000531594 PLCE1Q9P212 2302 aa-0.79□□□□□ -2.54
RC3H1-206ENST00000531594 K7ERU9 68 aa-0.79□□□□□ -2.54
RC3H1-206ENST00000531594 COX17Q14061 63 aa-0.79□□□□□ -2.54
RC3H1-206ENST00000531594 TAC4Q86UU9 113 aa-0.79□□□□□ -2.54
RC3H1-206ENST00000531594 TTC9CQ8N5M4 171 aa-0.79□□□□□ -2.54
RC3H1-206ENST00000531594 AIF1LQ9BQI0 150 aa-0.79□□□□□ -2.54
RC3H1-206ENST00000531594 LINC00472Q9H8W2 130 aa-0.79□□□□□ -2.54
RC3H1-206ENST00000531594 SPANXA1Q9NS26 97 aa-0.79□□□□□ -2.54
RC3H1-206ENST00000531594 MYO7BQ6PIF6 2116 aa-0.79□□□□□ -2.54
RC3H1-206ENST00000531594 EPG5Q9HCE0 2579 aa-0.79□□□□□ -2.54
RC3H1-206ENST00000531594 MRC1P22897 1456 aa-0.8□□□□□ -2.54
RC3H1-206ENST00000531594 IQSEC2Q5JU85 1478 aa-0.8□□□□□ -2.54
RC3H1-206ENST00000531594 PARP14Q460N5 1801 aa-0.8□□□□□ -2.54
RC3H1-206ENST00000531594 TNRC18O15417 2968 aaPredicted RBP-0.8□□□□□ -2.54
RC3H1-206ENST00000531594 CHD8Q9HCK8 2581 aa-0.8□□□□□ -2.54
RC3H1-206ENST00000531594 SIPA1L3O60292 1781 aaPredicted RBP-0.8□□□□□ -2.54
RC3H1-206ENST00000531594 M0R2Z0 102 aa-0.8□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms