RNA–Protein interactions for RNA: ENST00000531043.1

HIF3A-214, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-214ENST00000531043 A0A096LNI7 61 aa8.28□□□□□ -1.08
HIF3A-214ENST00000531043 H7C1H1 209 aa8.28□□□□□ -1.08
HIF3A-214ENST00000531043 NDUFS6O75380 124 aaKnown RBP8.28□□□□□ -1.08
HIF3A-214ENST00000531043 CCL20P78556 96 aa8.28□□□□□ -1.08
HIF3A-214ENST00000531043 STPG4Q8N801 248 aa8.28□□□□□ -1.08
HIF3A-214ENST00000531043 OR2D3Q8NGH3 330 aa8.28□□□□□ -1.08
HIF3A-214ENST00000531043 LPAP08519 4548 aa8.28□□□□□ -1.08
HIF3A-214ENST00000531043 C19orf71A6NCJ1 209 aa8.27□□□□□ -1.09
HIF3A-214ENST00000531043 PFDN1O60925 122 aa8.27□□□□□ -1.09
HIF3A-214ENST00000531043 AMTP48728 403 aa8.27□□□□□ -1.09
HIF3A-214ENST00000531043 CENPWQ5EE01 88 aa8.27□□□□□ -1.09
HIF3A-214ENST00000531043 PGLYRP4Q96LB8 373 aa8.27□□□□□ -1.09
HIF3A-214ENST00000531043 RAB19A4D1S5 217 aa8.26□□□□□ -1.09
HIF3A-214ENST00000531043 UBE2L6O14933 153 aa8.26□□□□□ -1.09
HIF3A-214ENST00000531043 CACNG7P62955 275 aa8.26□□□□□ -1.09
HIF3A-214ENST00000531043 COTL1Q14019 142 aa8.26□□□□□ -1.09
HIF3A-214ENST00000531043 CFAP161Q6P656 301 aa8.26□□□□□ -1.09
HIF3A-214ENST00000531043 KCNRGQ8N5I3 272 aa8.26□□□□□ -1.09
HIF3A-214ENST00000531043 CHCHD10Q8WYQ3 142 aaPredicted RBP8.26□□□□□ -1.09
HIF3A-214ENST00000531043 LINC00526Q96FQ7 95 aa8.26□□□□□ -1.09
HIF3A-214ENST00000531043 NIT2Q9NQR4 276 aa8.26□□□□□ -1.09
HIF3A-214ENST00000531043 GVQW2A0A096LPI5 108 aaPredicted RBP8.25□□□□□ -1.09
HIF3A-214ENST00000531043 GAS8-AS1O95177 125 aa8.25□□□□□ -1.09
HIF3A-214ENST00000531043 LYZL1Q6UWQ5 148 aa8.25□□□□□ -1.09
HIF3A-214ENST00000531043 Q6ZNX1 250 aa8.25□□□□□ -1.09
HIF3A-214ENST00000531043 C11orf52Q96A22 123 aa8.25□□□□□ -1.09
HIF3A-214ENST00000531043 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.24□□□□□ -1.09
HIF3A-214ENST00000531043 TRAV26-2A0A0B4J265 109 aa8.24□□□□□ -1.09
HIF3A-214ENST00000531043 IGKV2-29A2NJV5 120 aaPredicted RBP8.24□□□□□ -1.09
HIF3A-214ENST00000531043 NTF3P20783 257 aa8.24□□□□□ -1.09
HIF3A-214ENST00000531043 FOXI1Q12951 378 aa8.24□□□□□ -1.09
HIF3A-214ENST00000531043 SRSF9Q13242 221 aaKnown RBP eCLIP8.24□□□□□ -1.09
HIF3A-214ENST00000531043 GATD1Q8NB37 220 aa8.24□□□□□ -1.09
HIF3A-214ENST00000531043 H2AFB1P0C5Y9 115 aa8.23□□□□□ -1.09
HIF3A-214ENST00000531043 RPS20P60866 119 aaKnown RBP8.23□□□□□ -1.09
HIF3A-214ENST00000531043 SPINK6Q6UWN8 80 aa8.23□□□□□ -1.09
HIF3A-214ENST00000531043 RPL39LQ96EH5 51 aaKnown RBP8.23□□□□□ -1.09
HIF3A-214ENST00000531043 GNG13Q9P2W3 67 aa8.23□□□□□ -1.09
HIF3A-214ENST00000531043 TRBV20OR9-2A0A075B6H5 130 aa8.22□□□□□ -1.09
HIF3A-214ENST00000531043 UMAD1C9J7I0 102 aa8.22□□□□□ -1.09
HIF3A-214ENST00000531043 F2Z2F3 143 aa8.21□□□□□ -1.1
HIF3A-214ENST00000531043 IFNA1P01562 189 aa8.21□□□□□ -1.1
HIF3A-214ENST00000531043 TRGC1P0CF51 173 aa8.21□□□□□ -1.1
HIF3A-214ENST00000531043 FOXA3P55318 350 aaPredicted RBP8.21□□□□□ -1.1
HIF3A-214ENST00000531043 RNASEKQ6P5S7 137 aaKnown RBP8.21□□□□□ -1.1
HIF3A-214ENST00000531043 FGF6P10767 208 aa8.2□□□□□ -1.1
HIF3A-214ENST00000531043 CTRLP40313 264 aa8.2□□□□□ -1.1
HIF3A-214ENST00000531043 XCL1P47992 114 aa8.2□□□□□ -1.1
HIF3A-214ENST00000531043 AMMECR1LQ6DCA0 310 aa8.2□□□□□ -1.1
HIF3A-214ENST00000531043 REG3GQ6UW15 175 aa8.2□□□□□ -1.1
HIF3A-214ENST00000531043 C9orf62Q8N4C0 152 aa8.2□□□□□ -1.1
HIF3A-214ENST00000531043 GNG4P50150 75 aa8.19□□□□□ -1.1
HIF3A-214ENST00000531043 ZNF345Q14585 488 aa8.19□□□□□ -1.1
HIF3A-214ENST00000531043 FAM231BA6NCW3 169 aa8.18□□□□□ -1.1
HIF3A-214ENST00000531043 BCL2L11O43521 198 aa8.18□□□□□ -1.1
HIF3A-214ENST00000531043 TWIST1Q15672 202 aa8.18□□□□□ -1.1
HIF3A-214ENST00000531043 Q6ZRP5 223 aa8.18□□□□□ -1.1
HIF3A-214ENST00000531043 NUDT10Q8NFP7 164 aa8.18□□□□□ -1.1
HIF3A-214ENST00000531043 NUDT11Q96G61 164 aa8.18□□□□□ -1.1
HIF3A-214ENST00000531043 CARD19Q96LW7 228 aa8.18□□□□□ -1.1
HIF3A-214ENST00000531043 MANBALQ9NQG1 85 aa8.18□□□□□ -1.1
HIF3A-214ENST00000531043 LINC00959A0A1B0GUT2 108 aa8.17□□□□□ -1.1
HIF3A-214ENST00000531043 A0A1W2PNN7 141 aa8.17□□□□□ -1.1
HIF3A-214ENST00000531043 XKRY2A2RUG3 117 aa8.17□□□□□ -1.1
HIF3A-214ENST00000531043 CCL25O15444 150 aa8.17□□□□□ -1.1
HIF3A-214ENST00000531043 APCSP02743 223 aa8.17□□□□□ -1.1
HIF3A-214ENST00000531043 CNFNQ9BYD5 112 aa8.17□□□□□ -1.1
HIF3A-214ENST00000531043 TRAV1-1A0A0B4J248 108 aa8.16□□□□□ -1.1
HIF3A-214ENST00000531043 IGHV1-58A0A0C4DH39 117 aa8.16□□□□□ -1.1
HIF3A-214ENST00000531043 OR5A1Q8NGJ0 315 aa8.16□□□□□ -1.1
HIF3A-214ENST00000531043 RNASE7Q9H1E1 156 aaKnown RBP8.16□□□□□ -1.1
HIF3A-214ENST00000531043 LINC00474Q9P2X8 69 aa8.16□□□□□ -1.1
HIF3A-214ENST00000531043 KANTRA0A1W2PQU2 76 aa8.15□□□□□ -1.1
HIF3A-214ENST00000531043 SDHAF1A6NFY7 115 aa8.15□□□□□ -1.1
HIF3A-214ENST00000531043 K7EN84 100 aa8.15□□□□□ -1.1
HIF3A-214ENST00000531043 NCR2O95944 276 aa8.15□□□□□ -1.1
HIF3A-214ENST00000531043 PTTG1IPP53801 180 aa8.15□□□□□ -1.1
HIF3A-214ENST00000531043 SMIM12Q96EX1 92 aa8.15□□□□□ -1.1
HIF3A-214ENST00000531043 MED9Q9NWA0 146 aa8.15□□□□□ -1.1
HIF3A-214ENST00000531043 HMSDA8MTL9 139 aa8.14□□□□□ -1.11
HIF3A-214ENST00000531043 H7C423 109 aa8.14□□□□□ -1.11
HIF3A-214ENST00000531043 MEF2BQ02080 365 aaPredicted RBP8.14□□□□□ -1.11
HIF3A-214ENST00000531043 SYCNQ0VAF6 134 aa8.14□□□□□ -1.11
HIF3A-214ENST00000531043 GAGE2BQ13066 116 aa8.14□□□□□ -1.11
HIF3A-214ENST00000531043 RPP21Q9H633 154 aaKnown RBP8.14□□□□□ -1.11
HIF3A-214ENST00000531043 TSHBP01222 138 aa8.13□□□□□ -1.11
HIF3A-214ENST00000531043 BCL2P10415 239 aa8.13□□□□□ -1.11
HIF3A-214ENST00000531043 ESDP10768 282 aa8.13□□□□□ -1.11
HIF3A-214ENST00000531043 ZNF25P17030 456 aaPredicted RBP8.12□□□□□ -1.11
HIF3A-214ENST00000531043 PMCHP20382 165 aa8.12□□□□□ -1.11
HIF3A-214ENST00000531043 OCC1Q8TAD7 63 aa8.12□□□□□ -1.11
HIF3A-214ENST00000531043 TMEM242Q9NWH2 141 aa8.12□□□□□ -1.11
HIF3A-214ENST00000531043 PSORS1C2Q9UIG4 136 aa8.12□□□□□ -1.11
HIF3A-214ENST00000531043 IGLV4-69A0A075B6H9 119 aa8.11□□□□□ -1.11
HIF3A-214ENST00000531043 I3L3M4 83 aa8.11□□□□□ -1.11
HIF3A-214ENST00000531043 PDE6DO43924 150 aa8.11□□□□□ -1.11
HIF3A-214ENST00000531043 CAMPP49913 170 aa8.11□□□□□ -1.11
HIF3A-214ENST00000531043 CD164L2Q6UWJ8 174 aa8.11□□□□□ -1.11
HIF3A-214ENST00000531043 BIN3Q9NQY0 253 aa8.11□□□□□ -1.11
HIF3A-214ENST00000531043 CDC42SE2Q9NRR3 84 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms