RNA–Protein interactions for RNA: ENST00000530468.5

TM9SF1-209, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2

Gene TM9SF1, Length 1,065 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-209ENST00000530468 SMIM12Q96EX1 92 aa9.93□□□□□ -0.82
TM9SF1-209ENST00000530468 TRAV1-1A0A0B4J248 108 aa9.92□□□□□ -0.82
TM9SF1-209ENST00000530468 TAGLN2P37802 199 aaKnown RBP9.92□□□□□ -0.82
TM9SF1-209ENST00000530468 CENPWQ5EE01 88 aa9.92□□□□□ -0.82
TM9SF1-209ENST00000530468 DPH3Q96FX2 82 aa9.92□□□□□ -0.82
TM9SF1-209ENST00000530468 NIT2Q9NQR4 276 aa9.92□□□□□ -0.82
TM9SF1-209ENST00000530468 C19orf71A6NCJ1 209 aa9.91□□□□□ -0.82
TM9SF1-209ENST00000530468 UBE2L6O14933 153 aa9.91□□□□□ -0.82
TM9SF1-209ENST00000530468 SPACA4Q8TDM5 124 aa9.91□□□□□ -0.82
TM9SF1-209ENST00000530468 GFRA4Q9GZZ7 299 aa9.91□□□□□ -0.82
TM9SF1-209ENST00000530468 DPH3P1Q9H4G8 78 aa9.91□□□□□ -0.82
TM9SF1-209ENST00000530468 GNG13Q9P2W3 67 aa9.91□□□□□ -0.82
TM9SF1-209ENST00000530468 A0A087WYN8 130 aa9.9□□□□□ -0.82
TM9SF1-209ENST00000530468 SLPIP03973 132 aa9.9□□□□□ -0.82
TM9SF1-209ENST00000530468 BLOC1S1P78537 153 aa9.9□□□□□ -0.82
TM9SF1-209ENST00000530468 CCL20P78556 96 aa9.9□□□□□ -0.82
TM9SF1-209ENST00000530468 COTL1Q14019 142 aa9.9□□□□□ -0.82
TM9SF1-209ENST00000530468 BIN3Q9NQY0 253 aa9.9□□□□□ -0.82
TM9SF1-209ENST00000530468 PDE6DO43924 150 aa9.89□□□□□ -0.83
TM9SF1-209ENST00000530468 AMTP48728 403 aa9.89□□□□□ -0.83
TM9SF1-209ENST00000530468 GNG4P50150 75 aa9.89□□□□□ -0.83
TM9SF1-209ENST00000530468 CFAP161Q6P656 301 aa9.89□□□□□ -0.83
TM9SF1-209ENST00000530468 C9orf62Q8N4C0 152 aa9.89□□□□□ -0.83
TM9SF1-209ENST00000530468 PLAC8Q9NZF1 115 aa9.89□□□□□ -0.83
TM9SF1-209ENST00000530468 CHTF8P0CG12 524 aa9.88□□□□□ -0.83
TM9SF1-209ENST00000530468 NTF3P20783 257 aa9.88□□□□□ -0.83
TM9SF1-209ENST00000530468 LYZL1Q6UWQ5 148 aa9.88□□□□□ -0.83
TM9SF1-209ENST00000530468 C7orf33Q8WU49 177 aa9.88□□□□□ -0.83
TM9SF1-209ENST00000530468 RAB19A4D1S5 217 aa9.86□□□□□ -0.83
TM9SF1-209ENST00000530468 GAGE12HA6NDE8 117 aa9.86□□□□□ -0.83
TM9SF1-209ENST00000530468 MEF2BQ02080 365 aaPredicted RBP9.86□□□□□ -0.83
TM9SF1-209ENST00000530468 C15orf56Q8N910 161 aa9.86□□□□□ -0.83
TM9SF1-209ENST00000530468 PHOX2AO14813 284 aa9.85□□□□□ -0.83
TM9SF1-209ENST00000530468 NDUFS6O75380 124 aaKnown RBP9.85□□□□□ -0.83
TM9SF1-209ENST00000530468 CTRLP40313 264 aa9.85□□□□□ -0.83
TM9SF1-209ENST00000530468 RPS10P46783 165 aaKnown RBP9.85□□□□□ -0.83
TM9SF1-209ENST00000530468 COX6A2Q02221 97 aa9.84□□□□□ -0.83
TM9SF1-209ENST00000530468 CNFNQ9BYD5 112 aa9.84□□□□□ -0.83
TM9SF1-209ENST00000530468 MED9Q9NWA0 146 aa9.84□□□□□ -0.83
TM9SF1-209ENST00000530468 TRBV20OR9-2A0A075B6H5 130 aa9.83□□□□□ -0.84
TM9SF1-209ENST00000530468 NCR2O95944 276 aa9.83□□□□□ -0.84
TM9SF1-209ENST00000530468 BCL2P10415 239 aa9.83□□□□□ -0.84
TM9SF1-209ENST00000530468 TWIST1Q15672 202 aa9.83□□□□□ -0.84
TM9SF1-209ENST00000530468 AMMECR1LQ6DCA0 310 aa9.83□□□□□ -0.84
TM9SF1-209ENST00000530468 ALKAL2Q6UX46 152 aa9.83□□□□□ -0.84
TM9SF1-209ENST00000530468 IGKV3OR2-268A0A0C4DH90 116 aa9.82□□□□□ -0.84
TM9SF1-209ENST00000530468 H7C423 109 aa9.82□□□□□ -0.84
TM9SF1-209ENST00000530468 MAJINQ3KP22 176 aa9.82□□□□□ -0.84
TM9SF1-209ENST00000530468 HIGD2BQ4VC39 106 aa9.82□□□□□ -0.84
TM9SF1-209ENST00000530468 GATD1Q8NB37 220 aa9.82□□□□□ -0.84
TM9SF1-209ENST00000530468 NUDT10Q8NFP7 164 aa9.82□□□□□ -0.84
TM9SF1-209ENST00000530468 CHCHD10Q8WYQ3 142 aaPredicted RBP9.82□□□□□ -0.84
TM9SF1-209ENST00000530468 NUDT11Q96G61 164 aa9.82□□□□□ -0.84
TM9SF1-209ENST00000530468 GVQW2A0A096LPI5 108 aaPredicted RBP9.81□□□□□ -0.84
TM9SF1-209ENST00000530468 A0A1B0GVG6 124 aa9.81□□□□□ -0.84
TM9SF1-209ENST00000530468 PRSS3P2Q8NHM4 247 aa9.81□□□□□ -0.84
TM9SF1-209ENST00000530468 TRAV26-2A0A0B4J265 109 aa9.8□□□□□ -0.84
TM9SF1-209ENST00000530468 IGKV2-24A0A0C4DH68 120 aa9.8□□□□□ -0.84
TM9SF1-209ENST00000530468 APCSP02743 223 aa9.8□□□□□ -0.84
TM9SF1-209ENST00000530468 RNASEKQ6P5S7 137 aaKnown RBP9.8□□□□□ -0.84
TM9SF1-209ENST00000530468 TEX261Q6UWH6 196 aa9.8□□□□□ -0.84
TM9SF1-209ENST00000530468 SMIM15Q7Z3B0 74 aa9.8□□□□□ -0.84
TM9SF1-209ENST00000530468 GTSF1Q8WW33 167 aa9.8□□□□□ -0.84
TM9SF1-209ENST00000530468 RPP21Q9H633 154 aaKnown RBP9.8□□□□□ -0.84
TM9SF1-209ENST00000530468 PKIGQ9Y2B9 76 aa9.8□□□□□ -0.84
TM9SF1-209ENST00000530468 ZNF25P17030 456 aaPredicted RBP9.79□□□□□ -0.84
TM9SF1-209ENST00000530468 PRR3P79522 188 aaKnown RBP9.79□□□□□ -0.84
TM9SF1-209ENST00000530468 STPG4Q8N801 248 aa9.79□□□□□ -0.84
TM9SF1-209ENST00000530468 LINC01600Q96MT4 127 aa9.79□□□□□ -0.84
TM9SF1-209ENST00000530468 LINC00474Q9P2X8 69 aa9.79□□□□□ -0.84
TM9SF1-209ENST00000530468 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.78□□□□□ -0.84
TM9SF1-209ENST00000530468 IGKV2-29A2NJV5 120 aaPredicted RBP9.78□□□□□ -0.84
TM9SF1-209ENST00000530468 FGF6P10767 208 aa9.78□□□□□ -0.84
TM9SF1-209ENST00000530468 EIF5A2Q9GZV4 153 aaKnown RBP9.78□□□□□ -0.84
TM9SF1-209ENST00000530468 SDHAF1A6NFY7 115 aa9.77□□□□□ -0.85
TM9SF1-209ENST00000530468 TMEM250H0YL14 139 aa9.77□□□□□ -0.85
TM9SF1-209ENST00000530468 FOXI1Q12951 378 aa9.77□□□□□ -0.85
TM9SF1-209ENST00000530468 OR5A1Q8NGJ0 315 aa9.77□□□□□ -0.85
TM9SF1-209ENST00000530468 RPL39LQ96EH5 51 aaKnown RBP9.77□□□□□ -0.85
TM9SF1-209ENST00000530468 RNASE7Q9H1E1 156 aaKnown RBP9.77□□□□□ -0.85
TM9SF1-209ENST00000530468 A0A096LNI7 61 aa9.76□□□□□ -0.85
TM9SF1-209ENST00000530468 K7EN84 100 aa9.76□□□□□ -0.85
TM9SF1-209ENST00000530468 BTF3L4Q96K17 158 aa9.76□□□□□ -0.85
TM9SF1-209ENST00000530468 I3L3M4 83 aa9.75□□□□□ -0.85
TM9SF1-209ENST00000530468 LYPD6BQ8NI32 183 aa9.75□□□□□ -0.85
TM9SF1-209ENST00000530468 OCC1Q8TAD7 63 aa9.75□□□□□ -0.85
TM9SF1-209ENST00000530468 TMEM101Q96IK0 257 aa9.75□□□□□ -0.85
TM9SF1-209ENST00000530468 FAM210AQ96ND0 272 aa9.75□□□□□ -0.85
TM9SF1-209ENST00000530468 IGHV1-58A0A0C4DH39 117 aa9.74□□□□□ -0.85
TM9SF1-209ENST00000530468 PMCHP20382 165 aa9.74□□□□□ -0.85
TM9SF1-209ENST00000530468 XCL1P47992 114 aa9.74□□□□□ -0.85
TM9SF1-209ENST00000530468 TRBV6-5A0A0K0K1A5 114 aa9.73□□□□□ -0.85
TM9SF1-209ENST00000530468 LINC00959A0A1B0GUT2 108 aa9.73□□□□□ -0.85
TM9SF1-209ENST00000530468 CEBPGP53567 150 aa9.73□□□□□ -0.85
TM9SF1-209ENST00000530468 FOXA3P55318 350 aaPredicted RBP9.73□□□□□ -0.85
TM9SF1-209ENST00000530468 REG3GQ6UW15 175 aa9.73□□□□□ -0.85
TM9SF1-209ENST00000530468 SPINK6Q6UWN8 80 aa9.73□□□□□ -0.85
TM9SF1-209ENST00000530468 CARD19Q96LW7 228 aa9.73□□□□□ -0.85
TM9SF1-209ENST00000530468 TNXBP22105 4242 aa9.73□□□□□ -0.85
TM9SF1-209ENST00000530468 A0A0J9YXV3 536 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms