RNA–Protein interactions for RNA: ENST00000530402.1

VPS26B-205, Transcript of VPS26, retromer complex component B, humanhuman

TSL 3

Gene VPS26B, Length 740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-205ENST00000530402 HHLA3Q9XRX5 114 aa3.02□□□□□ -1.93
VPS26B-205ENST00000530402 FUT9Q9Y231 359 aa3.02□□□□□ -1.93
VPS26B-205ENST00000530402 ICOSQ9Y6W8 199 aa3.02□□□□□ -1.93
VPS26B-205ENST00000530402 DNAH1Q9P2D7 4330 aa3.02□□□□□ -1.93
VPS26B-205ENST00000530402 DNAH7Q8WXX0 4024 aa3.02□□□□□ -1.93
VPS26B-205ENST00000530402 BIRC6Q9NR09 4857 aa3.01□□□□□ -1.93
VPS26B-205ENST00000530402 TRAV5A0A0B4J249 113 aa3.01□□□□□ -1.93
VPS26B-205ENST00000530402 H3BQ15 152 aa3.01□□□□□ -1.93
VPS26B-205ENST00000530402 PLA2G10O15496 165 aa3.01□□□□□ -1.93
VPS26B-205ENST00000530402 SSNA1O43805 119 aa3.01□□□□□ -1.93
VPS26B-205ENST00000530402 ORM1P02763 201 aa3.01□□□□□ -1.93
VPS26B-205ENST00000530402 PFN1P07737 140 aaKnown RBP3.01□□□□□ -1.93
VPS26B-205ENST00000530402 EVI2AP22794 236 aa3.01□□□□□ -1.93
VPS26B-205ENST00000530402 RANP62826 216 aaKnown RBP3.01□□□□□ -1.93
VPS26B-205ENST00000530402 KHDC3LQ587J8 217 aa3.01□□□□□ -1.93
VPS26B-205ENST00000530402 IBA57Q5T440 356 aaKnown RBP3.01□□□□□ -1.93
VPS26B-205ENST00000530402 OR5C1Q8NGR4 320 aa3.01□□□□□ -1.93
VPS26B-205ENST00000530402 FAM210AQ96ND0 272 aa3.01□□□□□ -1.93
VPS26B-205ENST00000530402 TXNDC17Q9BRA2 123 aa3.01□□□□□ -1.93
VPS26B-205ENST00000530402 UPK3BQ9BT76 320 aa3.01□□□□□ -1.93
VPS26B-205ENST00000530402 NPCDR1Q9BY65 106 aa3.01□□□□□ -1.93
VPS26B-205ENST00000530402 NMES1Q9C002 83 aa3.01□□□□□ -1.93
VPS26B-205ENST00000530402 ZNF586Q9NXT0 402 aa3.01□□□□□ -1.93
VPS26B-205ENST00000530402 LINC00588Q9Y4M8 146 aa3.01□□□□□ -1.93
VPS26B-205ENST00000530402 DYNC2H1Q8NCM8 4307 aaKnown RBP3.01□□□□□ -1.93
VPS26B-205ENST00000530402 HYDINQ4G0P3 5121 aa3□□□□□ -1.93
VPS26B-205ENST00000530402 EPPK1P58107 5090 aaKnown RBP3□□□□□ -1.93
VPS26B-205ENST00000530402 RBAKDNA6NC62 111 aa3□□□□□ -1.93
VPS26B-205ENST00000530402 C9JCJ5 164 aa3□□□□□ -1.93
VPS26B-205ENST00000530402 INMT-MINDY4F8WBC2 141 aa3□□□□□ -1.93
VPS26B-205ENST00000530402 SLC17A3O00476 420 aa3□□□□□ -1.93
VPS26B-205ENST00000530402 PSCAO43653 123 aa3□□□□□ -1.93
VPS26B-205ENST00000530402 NDUFS5O43920 106 aa3□□□□□ -1.93
VPS26B-205ENST00000530402 SRIP30626 198 aa3□□□□□ -1.93
VPS26B-205ENST00000530402 UBE2L3P68036 154 aaKnown RBP3□□□□□ -1.93
VPS26B-205ENST00000530402 ESRGQ1W209 222 aa3□□□□□ -1.93
VPS26B-205ENST00000530402 ACOT6Q3I5F7 207 aaPredicted RBP3□□□□□ -1.93
VPS26B-205ENST00000530402 EXOC3-AS1Q8N2X6 119 aa3□□□□□ -1.93
VPS26B-205ENST00000530402 HYLS1Q96M11 299 aa3□□□□□ -1.93
VPS26B-205ENST00000530402 LINC00467Q9BRT7 94 aa3□□□□□ -1.93
VPS26B-205ENST00000530402 WDR61Q9GZS3 305 aaKnown RBP3□□□□□ -1.93
VPS26B-205ENST00000530402 AGPAT4-IT1Q9H0P7 198 aa3□□□□□ -1.93
VPS26B-205ENST00000530402 ZNF492Q9P255 531 aa3□□□□□ -1.93
VPS26B-205ENST00000530402 MRPS16Q9Y3D3 137 aaKnown RBP3□□□□□ -1.93
VPS26B-205ENST00000530402 LENEPQ9Y5L5 61 aa3□□□□□ -1.93
VPS26B-205ENST00000530402 LY96Q9Y6Y9 160 aa3□□□□□ -1.93
VPS26B-205ENST00000530402 CSMD3Q7Z407 3707 aa2.99□□□□□ -1.93
VPS26B-205ENST00000530402 TRAV21A0A0B4J279 112 aa2.99□□□□□ -1.93
VPS26B-205ENST00000530402 IGSF23A1L1A6 192 aa2.99□□□□□ -1.93
VPS26B-205ENST00000530402 PGPA6NDG6 321 aa2.99□□□□□ -1.93
VPS26B-205ENST00000530402 M0R3E3 92 aa2.99□□□□□ -1.93
VPS26B-205ENST00000530402 OR10J4P0C629 311 aa2.99□□□□□ -1.93
VPS26B-205ENST00000530402 PYYP10082 97 aa2.99□□□□□ -1.93
VPS26B-205ENST00000530402 TCL1AP56279 114 aa2.99□□□□□ -1.93
VPS26B-205ENST00000530402 Q6ZTI0 123 aa2.99□□□□□ -1.93
VPS26B-205ENST00000530402 MIR17HGQ75NE6 70 aa2.99□□□□□ -1.93
VPS26B-205ENST00000530402 SPATA12Q7Z6I5 190 aa2.99□□□□□ -1.93
VPS26B-205ENST00000530402 C10orf126Q8N4M7 172 aa2.99□□□□□ -1.93
VPS26B-205ENST00000530402 ORAOV1Q8WV07 137 aa2.99□□□□□ -1.93
VPS26B-205ENST00000530402 PPP1R1CQ8WVI7 109 aa2.99□□□□□ -1.93
VPS26B-205ENST00000530402 LYSTQ99698 3801 aa2.99□□□□□ -1.93
VPS26B-205ENST00000530402 PRADC1Q9BSG0 188 aa2.99□□□□□ -1.93
VPS26B-205ENST00000530402 PARD6GQ9BYG4 376 aaPredicted RBP2.99□□□□□ -1.93
VPS26B-205ENST00000530402 NAGKQ9UJ70 344 aa2.99□□□□□ -1.93
VPS26B-205ENST00000530402 PLECQ15149 4684 aaKnown RBP2.98□□□□□ -1.93
VPS26B-205ENST00000530402 IGKV2-40A0A087WW87 121 aaPredicted RBP2.98□□□□□ -1.93
VPS26B-205ENST00000530402 A0A096LPF7 62 aa2.98□□□□□ -1.93
VPS26B-205ENST00000530402 M0R2P5 195 aa2.98□□□□□ -1.93
VPS26B-205ENST00000530402 SPINK4O60575 86 aa2.98□□□□□ -1.93
VPS26B-205ENST00000530402 IGKV2D-40P01614 121 aaPredicted RBP2.98□□□□□ -1.93
VPS26B-205ENST00000530402 IGHV3-53P01767 116 aa2.98□□□□□ -1.93
VPS26B-205ENST00000530402 PRB4P10163 310 aaPredicted RBP2.98□□□□□ -1.93
VPS26B-205ENST00000530402 RPL12P30050 165 aaKnown RBP2.98□□□□□ -1.93
VPS26B-205ENST00000530402 CRYBA4P53673 196 aa2.98□□□□□ -1.93
VPS26B-205ENST00000530402 PMVKQ15126 192 aa2.98□□□□□ -1.93
VPS26B-205ENST00000530402 SAPCD1Q5SSQ6 148 aa2.98□□□□□ -1.93
VPS26B-205ENST00000530402 LYPD5Q6UWN5 251 aa2.98□□□□□ -1.93
VPS26B-205ENST00000530402 IQCF2Q8IXL9 164 aa2.98□□□□□ -1.93
VPS26B-205ENST00000530402 TREM1Q9NP99 234 aa2.98□□□□□ -1.93
VPS26B-205ENST00000530402 OTORQ9NRC9 128 aa2.98□□□□□ -1.93
VPS26B-205ENST00000530402 TRAV4A0A0B4J268 109 aa2.97□□□□□ -1.93
VPS26B-205ENST00000530402 F6UZH7 168 aa2.97□□□□□ -1.93
VPS26B-205ENST00000530402 SIX6O95475 246 aa2.97□□□□□ -1.93
VPS26B-205ENST00000530402 MPC2O95563 127 aa2.97□□□□□ -1.93
VPS26B-205ENST00000530402 SEC11BP0C7V7 166 aa2.97□□□□□ -1.93
VPS26B-205ENST00000530402 S100A4P26447 101 aaKnown RBP2.97□□□□□ -1.93
VPS26B-205ENST00000530402 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.97□□□□□ -1.93
VPS26B-205ENST00000530402 ASB13Q8WXK3 278 aa2.97□□□□□ -1.93
VPS26B-205ENST00000530402 FXYD5Q96DB9 178 aa2.97□□□□□ -1.93
VPS26B-205ENST00000530402 SMIM3Q9BZL3 60 aa2.97□□□□□ -1.93
VPS26B-205ENST00000530402 TMEM167BQ9NRX6 74 aa2.97□□□□□ -1.93
VPS26B-205ENST00000530402 MRPL16Q9NX20 251 aaKnown RBP2.97□□□□□ -1.93
VPS26B-205ENST00000530402 OR5AC2Q9NZP5 309 aa2.97□□□□□ -1.93
VPS26B-205ENST00000530402 URGCP-MRPS24S4R325 110 aa2.97□□□□□ -1.93
VPS26B-205ENST00000530402 ALMS1Q8TCU4 4167 aa2.97□□□□□ -1.93
VPS26B-205ENST00000530402 BORCS7-ASMTA0A0B4J1R7 106 aa2.96□□□□□ -1.94
VPS26B-205ENST00000530402 FAM240AA0A1B0GVK7 77 aa2.96□□□□□ -1.94
VPS26B-205ENST00000530402 CXorf1O96002 111 aa2.96□□□□□ -1.94
VPS26B-205ENST00000530402 CRYGDP07320 174 aa2.96□□□□□ -1.94
VPS26B-205ENST00000530402 OR5AL1P0C617 328 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms