RNA–Protein interactions for RNA: ENST00000530041.5

USP47-209, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 3

Gene USP47, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-209ENST00000530041 A0A0U1RQV1 116 aa2.76□□□□□ -1.97
USP47-209ENST00000530041 F8VRH5 84 aa2.76□□□□□ -1.97
USP47-209ENST00000530041 K7EMI3 77 aa2.76□□□□□ -1.97
USP47-209ENST00000530041 LGALS1P09382 135 aaKnown RBP2.76□□□□□ -1.97
USP47-209ENST00000530041 APELAP0DMC3 54 aa2.76□□□□□ -1.97
USP47-209ENST00000530041 CRYBA4P53673 196 aa2.76□□□□□ -1.97
USP47-209ENST00000530041 TCTAP57738 103 aa2.76□□□□□ -1.97
USP47-209ENST00000530041 CKS1BP61024 79 aa2.76□□□□□ -1.97
USP47-209ENST00000530041 UBE2D3P61077 147 aa2.76□□□□□ -1.97
USP47-209ENST00000530041 UBE2D2P62837 147 aa2.76□□□□□ -1.97
USP47-209ENST00000530041 DYNAPQ8N1N2 210 aa2.76□□□□□ -1.97
USP47-209ENST00000530041 OR11H6Q8NGC7 330 aa2.76□□□□□ -1.97
USP47-209ENST00000530041 FAM57AQ8TBR7 257 aa2.76□□□□□ -1.97
USP47-209ENST00000530041 ZNF418Q8TF45 676 aaPredicted RBP2.76□□□□□ -1.97
USP47-209ENST00000530041 TOMM6Q96B49 74 aa2.76□□□□□ -1.97
USP47-209ENST00000530041 LINC01600Q96MT4 127 aa2.76□□□□□ -1.97
USP47-209ENST00000530041 CAMK2N2Q96S95 79 aa2.76□□□□□ -1.97
USP47-209ENST00000530041 SLC50A1Q9BRV3 221 aa2.76□□□□□ -1.97
USP47-209ENST00000530041 MRPL16Q9NX20 251 aaKnown RBP2.76□□□□□ -1.97
USP47-209ENST00000530041 C21orf62Q9NYP8 219 aa2.76□□□□□ -1.97
USP47-209ENST00000530041 CYSLTR1Q9Y271 337 aa2.76□□□□□ -1.97
USP47-209ENST00000530041 MALRD1Q5VYJ5 2156 aa2.76□□□□□ -1.97
USP47-209ENST00000530041 IGLV1-50A0A075B6I6 118 aa2.75□□□□□ -1.97
USP47-209ENST00000530041 SPAARA0A1B0GVQ0 90 aa2.75□□□□□ -1.97
USP47-209ENST00000530041 SMIM9A6NGZ8 99 aa2.75□□□□□ -1.97
USP47-209ENST00000530041 ODF3BA8MYP8 253 aa2.75□□□□□ -1.97
USP47-209ENST00000530041 OOSP1A8MZH6 123 aa2.75□□□□□ -1.97
USP47-209ENST00000530041 OR11H12B2RN74 326 aa2.75□□□□□ -1.97
USP47-209ENST00000530041 E7EQL1 145 aa2.75□□□□□ -1.97
USP47-209ENST00000530041 M0R381 172 aa2.75□□□□□ -1.97
USP47-209ENST00000530041 CNIH1O95406 144 aa2.75□□□□□ -1.97
USP47-209ENST00000530041 TRGV3P03979 118 aa2.75□□□□□ -1.97
USP47-209ENST00000530041 CTSGP08311 255 aa2.75□□□□□ -1.97
USP47-209ENST00000530041 CD7P09564 240 aa2.75□□□□□ -1.97
USP47-209ENST00000530041 COX6B1P14854 86 aa2.75□□□□□ -1.97
USP47-209ENST00000530041 HLA-DMBP28068 263 aa2.75□□□□□ -1.97
USP47-209ENST00000530041 INSL3P51460 131 aa2.75□□□□□ -1.97
USP47-209ENST00000530041 BSPH1Q075Z2 132 aa2.75□□□□□ -1.97
USP47-209ENST00000530041 DAZ2Q13117 558 aaKnown RBP2.75□□□□□ -1.97
USP47-209ENST00000530041 DEFB109BQ30KR1 87 aa2.75□□□□□ -1.97
USP47-209ENST00000530041 AMTNQ6UX39 209 aa2.75□□□□□ -1.97
USP47-209ENST00000530041 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.75□□□□□ -1.97
USP47-209ENST00000530041 SCGB1D4Q6XE38 83 aa2.75□□□□□ -1.97
USP47-209ENST00000530041 Q8N6K4 173 aa2.75□□□□□ -1.97
USP47-209ENST00000530041 OR11H1Q8NG94 326 aa2.75□□□□□ -1.97
USP47-209ENST00000530041 OR11H2Q8NH07 326 aa2.75□□□□□ -1.97
USP47-209ENST00000530041 Q8TAT8 98 aa2.75□□□□□ -1.97
USP47-209ENST00000530041 PPDPFLQ8WWR9 84 aa2.75□□□□□ -1.97
USP47-209ENST00000530041 CARD19Q96LW7 228 aa2.75□□□□□ -1.97
USP47-209ENST00000530041 C20orf78Q9BR46 151 aa2.75□□□□□ -1.97
USP47-209ENST00000530041 SMIM2Q9BVW6 85 aa2.75□□□□□ -1.97
USP47-209ENST00000530041 AGPAT4-IT1Q9H0P7 198 aa2.75□□□□□ -1.97
USP47-209ENST00000530041 DAZ3Q9NR90 486 aaKnown RBP2.75□□□□□ -1.97
USP47-209ENST00000530041 LENEPQ9Y5L5 61 aa2.75□□□□□ -1.97
USP47-209ENST00000530041 DNAH14Q0VDD8 3507 aa2.75□□□□□ -1.97
USP47-209ENST00000530041 REV3LO60673 3130 aa2.74□□□□□ -1.97
USP47-209ENST00000530041 UNC80Q8N2C7 3258 aa2.74□□□□□ -1.97
USP47-209ENST00000530041 TRBV20-1A0A075B6N2 111 aa2.74□□□□□ -1.97
USP47-209ENST00000530041 A6NDX4 124 aa2.74□□□□□ -1.97
USP47-209ENST00000530041 LINC01549A6NIU2 74 aa2.74□□□□□ -1.97
USP47-209ENST00000530041 M0R1W7 72 aa2.74□□□□□ -1.97
USP47-209ENST00000530041 APOMO95445 188 aa2.74□□□□□ -1.97
USP47-209ENST00000530041 PRB4P10163 310 aaPredicted RBP2.74□□□□□ -1.97
USP47-209ENST00000530041 LINC00315P59091 139 aa2.74□□□□□ -1.97
USP47-209ENST00000530041 KRTAP10-10P60014 251 aa2.74□□□□□ -1.97
USP47-209ENST00000530041 ATP5G2Q06055 141 aa2.74□□□□□ -1.97
USP47-209ENST00000530041 TMEM78Q5T7P6 136 aa2.74□□□□□ -1.97
USP47-209ENST00000530041 LYRM7Q5U5X0 104 aa2.74□□□□□ -1.97
USP47-209ENST00000530041 Q6ZUT4 128 aa2.74□□□□□ -1.97
USP47-209ENST00000530041 TEN1Q86WV5 123 aa2.74□□□□□ -1.97
USP47-209ENST00000530041 Q8N9W7 124 aa2.74□□□□□ -1.97
USP47-209ENST00000530041 PRADC1Q9BSG0 188 aa2.74□□□□□ -1.97
USP47-209ENST00000530041 DYNLRB1Q9NP97 96 aa2.74□□□□□ -1.97
USP47-209ENST00000530041 ZNF706Q9Y5V0 76 aaPredicted RBP2.74□□□□□ -1.97
USP47-209ENST00000530041 ABCA1O95477 2261 aa2.73□□□□□ -1.97
USP47-209ENST00000530041 PLCE1Q9P212 2302 aa2.73□□□□□ -1.97
USP47-209ENST00000530041 CEP290O15078 2479 aa2.73□□□□□ -1.97
USP47-209ENST00000530041 A0A0J9YY99 117 aa2.73□□□□□ -1.97
USP47-209ENST00000530041 A0A1B0GVX0 72 aa2.73□□□□□ -1.97
USP47-209ENST00000530041 CLPSL1A2RUU4 121 aa2.73□□□□□ -1.97
USP47-209ENST00000530041 TMEM262E9PQX1 116 aa2.73□□□□□ -1.97
USP47-209ENST00000530041 PPP1R17O96001 155 aa2.73□□□□□ -1.97
USP47-209ENST00000530041 IGHV3-11P01762 117 aa2.73□□□□□ -1.97
USP47-209ENST00000530041 MT-ATP8P03928 68 aa2.73□□□□□ -1.97
USP47-209ENST00000530041 CRYGDP07320 174 aa2.73□□□□□ -1.97
USP47-209ENST00000530041 SPINK8P0C7L1 97 aa2.73□□□□□ -1.97
USP47-209ENST00000530041 TLX1NBP0CAT3 122 aa2.73□□□□□ -1.97
USP47-209ENST00000530041 SCGB1C2P0DMR2 95 aa2.73□□□□□ -1.97
USP47-209ENST00000530041 EFNA4P52798 201 aa2.73□□□□□ -1.97
USP47-209ENST00000530041 MP68P56378 58 aa2.73□□□□□ -1.97
USP47-209ENST00000530041 MINOS1Q5TGZ0 78 aa2.73□□□□□ -1.97
USP47-209ENST00000530041 FAM222AQ5U5X8 452 aa2.73□□□□□ -1.97
USP47-209ENST00000530041 NDUFA11Q86Y39 141 aa2.73□□□□□ -1.97
USP47-209ENST00000530041 ITLN2Q8WWU7 325 aaPredicted RBP2.73□□□□□ -1.97
USP47-209ENST00000530041 PLEKHB2Q96CS7 222 aa2.73□□□□□ -1.97
USP47-209ENST00000530041 SCGB3A1Q96QR1 104 aa2.73□□□□□ -1.97
USP47-209ENST00000530041 DPH3P1Q9H4G8 78 aa2.73□□□□□ -1.97
USP47-209ENST00000530041 ERG28Q9UKR5 140 aa2.73□□□□□ -1.97
USP47-209ENST00000530041 MINOS1-NBL1R4GNA1 71 aa2.73□□□□□ -1.97
USP47-209ENST00000530041 S4R3C0 116 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms