RNA–Protein interactions for RNA: ENST00000529773.1

CLP1-204, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 4

Gene CLP1, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-204ENST00000529773 BTF3P20290 206 aaKnown RBP11.84□□□□□ -0.51
CLP1-204ENST00000529773 NIT1Q86X76 327 aa11.84□□□□□ -0.51
CLP1-204ENST00000529773 PRELID3AQ96N28 172 aa11.84□□□□□ -0.51
CLP1-204ENST00000529773 TSHBP01222 138 aa11.83□□□□□ -0.52
CLP1-204ENST00000529773 APCSP02743 223 aa11.83□□□□□ -0.52
CLP1-204ENST00000529773 PKIAP61925 76 aa11.83□□□□□ -0.52
CLP1-204ENST00000529773 VCYO14598 125 aa11.82□□□□□ -0.52
CLP1-204ENST00000529773 SMIM2Q9BVW6 85 aa11.82□□□□□ -0.52
CLP1-204ENST00000529773 C10orf126Q8N4M7 172 aa11.81□□□□□ -0.52
CLP1-204ENST00000529773 TMEM243Q9BU79 118 aa11.81□□□□□ -0.52
CLP1-204ENST00000529773 TRAV9-2A0A087WT02 112 aa11.8□□□□□ -0.52
CLP1-204ENST00000529773 ESDP10768 282 aa11.8□□□□□ -0.52
CLP1-204ENST00000529773 PMCHP20382 165 aa11.8□□□□□ -0.52
CLP1-204ENST00000529773 AMTP48728 403 aa11.8□□□□□ -0.52
CLP1-204ENST00000529773 Q8N3U1 123 aa11.8□□□□□ -0.52
CLP1-204ENST00000529773 MRPL18Q9H0U6 180 aaKnown RBP11.8□□□□□ -0.52
CLP1-204ENST00000529773 DNAH2Q9P225 4427 aa11.8□□□□□ -0.52
CLP1-204ENST00000529773 H7C423 109 aa11.79□□□□□ -0.52
CLP1-204ENST00000529773 TCAPO15273 167 aa11.79□□□□□ -0.52
CLP1-204ENST00000529773 CHCHD5Q9BSY4 110 aa11.79□□□□□ -0.52
CLP1-204ENST00000529773 M0R2N4 97 aa11.78□□□□□ -0.52
CLP1-204ENST00000529773 LAGE3Q14657 143 aa11.78□□□□□ -0.52
CLP1-204ENST00000529773 KIR2DL4Q99706 377 aa11.78□□□□□ -0.52
CLP1-204ENST00000529773 ALKBH7Q9BT30 221 aaPredicted RBP11.78□□□□□ -0.52
CLP1-204ENST00000529773 MAP1LC3AQ9H492 121 aa11.78□□□□□ -0.52
CLP1-204ENST00000529773 A0A1B0GUV1 79 aa11.77□□□□□ -0.53
CLP1-204ENST00000529773 IBA57-AS1B1ANH7 110 aa11.77□□□□□ -0.53
CLP1-204ENST00000529773 ATP6V1G1O75348 118 aa11.77□□□□□ -0.53
CLP1-204ENST00000529773 KIAA1644Q3SXP7 199 aa11.77□□□□□ -0.53
CLP1-204ENST00000529773 MPV17L2Q567V2 206 aa11.77□□□□□ -0.53
CLP1-204ENST00000529773 FRAS1Q86XX4 4008 aa11.77□□□□□ -0.53
CLP1-204ENST00000529773 A0A087WX48 190 aa11.76□□□□□ -0.53
CLP1-204ENST00000529773 IGHV3-30P01768 117 aa11.76□□□□□ -0.53
CLP1-204ENST00000529773 IGHV3-33P01772 117 aa11.76□□□□□ -0.53
CLP1-204ENST00000529773 IGHV3-30-3P0DP02 117 aa11.76□□□□□ -0.53
CLP1-204ENST00000529773 IGHV3-30-5P0DP03 117 aa11.76□□□□□ -0.53
CLP1-204ENST00000529773 S100A1P23297 94 aa11.76□□□□□ -0.53
CLP1-204ENST00000529773 TRAPPC1Q9Y5R8 145 aa11.76□□□□□ -0.53
CLP1-204ENST00000529773 DNAH10Q8IVF4 4471 aa11.75□□□□□ -0.53
CLP1-204ENST00000529773 COLCA2A8K830 154 aa11.75□□□□□ -0.53
CLP1-204ENST00000529773 RBX1P62877 108 aa11.75□□□□□ -0.53
CLP1-204ENST00000529773 FABP9Q0Z7S8 132 aa11.75□□□□□ -0.53
CLP1-204ENST00000529773 GAGE6Q13070 117 aa11.75□□□□□ -0.53
CLP1-204ENST00000529773 C6orf223Q8N319 242 aa11.75□□□□□ -0.53
CLP1-204ENST00000529773 Q8N8P6 123 aa11.75□□□□□ -0.53
CLP1-204ENST00000529773 DEFB104AQ8WTQ1 72 aa11.75□□□□□ -0.53
CLP1-204ENST00000529773 K7EMI3 77 aa11.74□□□□□ -0.53
CLP1-204ENST00000529773 FCER1GP30273 86 aa11.74□□□□□ -0.53
CLP1-204ENST00000529773 C1orf134Q5TEV5 83 aa11.74□□□□□ -0.53
CLP1-204ENST00000529773 MRPL52Q86TS9 123 aaKnown RBP11.74□□□□□ -0.53
CLP1-204ENST00000529773 NXT2Q9NPJ8 142 aaKnown RBP11.74□□□□□ -0.53
CLP1-204ENST00000529773 TMEM262E9PQX1 116 aa11.73□□□□□ -0.53
CLP1-204ENST00000529773 UBE2L6O14933 153 aa11.73□□□□□ -0.53
CLP1-204ENST00000529773 ZNF25P17030 456 aaPredicted RBP11.73□□□□□ -0.53
CLP1-204ENST00000529773 Q6ZRN7 208 aaPredicted RBP11.73□□□□□ -0.53
CLP1-204ENST00000529773 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.72□□□□□ -0.53
CLP1-204ENST00000529773 IGKV2-29A2NJV5 120 aaPredicted RBP11.72□□□□□ -0.53
CLP1-204ENST00000529773 LINC01546A6NGU7 62 aa11.72□□□□□ -0.53
CLP1-204ENST00000529773 RTL8CO15255 209 aa11.72□□□□□ -0.53
CLP1-204ENST00000529773 SCO1O75880 301 aa11.72□□□□□ -0.53
CLP1-204ENST00000529773 Q8N976 141 aa11.72□□□□□ -0.53
CLP1-204ENST00000529773 C20orf203Q8NBC4 194 aa11.72□□□□□ -0.53
CLP1-204ENST00000529773 PRR34Q9NV39 138 aa11.72□□□□□ -0.53
CLP1-204ENST00000529773 DNAH17Q9UFH2 4485 aa11.72□□□□□ -0.53
CLP1-204ENST00000529773 FGF6P10767 208 aa11.71□□□□□ -0.53
CLP1-204ENST00000529773 NFE4Q86UQ8 179 aa11.71□□□□□ -0.53
CLP1-204ENST00000529773 IGLV4-60A0A075B6I1 120 aa11.7□□□□□ -0.54
CLP1-204ENST00000529773 LOC389332A0A1B0GUA5 103 aa11.7□□□□□ -0.54
CLP1-204ENST00000529773 RAB5AP20339 215 aa11.7□□□□□ -0.54
CLP1-204ENST00000529773 TIMM21Q9BVV7 248 aa11.7□□□□□ -0.54
CLP1-204ENST00000529773 KLK12Q9UKR0 248 aa11.7□□□□□ -0.54
CLP1-204ENST00000529773 CSDC2Q9Y534 153 aaKnown RBP11.7□□□□□ -0.54
CLP1-204ENST00000529773 FAT2Q9NYQ8 4349 aa11.7□□□□□ -0.54
CLP1-204ENST00000529773 TRAV8-3A0A0A6YYJ7 113 aa11.69□□□□□ -0.54
CLP1-204ENST00000529773 IFI27P40305 119 aaPredicted RBP11.69□□□□□ -0.54
CLP1-204ENST00000529773 C18orf32Q8TCD1 76 aa11.69□□□□□ -0.54
CLP1-204ENST00000529773 UBE2D4Q9Y2X8 147 aa11.69□□□□□ -0.54
CLP1-204ENST00000529773 ANGP03950 147 aaKnown RBP11.68□□□□□ -0.54
CLP1-204ENST00000529773 SMAGPQ0VAQ4 97 aa11.68□□□□□ -0.54
CLP1-204ENST00000529773 Q0VG73 95 aa11.68□□□□□ -0.54
CLP1-204ENST00000529773 ORMDL2Q53FV1 153 aa11.68□□□□□ -0.54
CLP1-204ENST00000529773 ENHOQ6UWT2 76 aa11.68□□□□□ -0.54
CLP1-204ENST00000529773 TMEM18Q96B42 140 aa11.68□□□□□ -0.54
CLP1-204ENST00000529773 AMMECR1LQ6DCA0 310 aa11.67□□□□□ -0.54
CLP1-204ENST00000529773 LINC00336Q6ZUF6 198 aa11.67□□□□□ -0.54
CLP1-204ENST00000529773 TRGC2P03986 189 aa11.66□□□□□ -0.54
CLP1-204ENST00000529773 MIAQ16674 131 aa11.66□□□□□ -0.54
CLP1-204ENST00000529773 UBE2WQ96B02 151 aa11.66□□□□□ -0.54
CLP1-204ENST00000529773 SPANXA1Q9NS26 97 aa11.66□□□□□ -0.54
CLP1-204ENST00000529773 CRPP02741 224 aa11.65□□□□□ -0.54
CLP1-204ENST00000529773 REG3AQ06141 175 aa11.65□□□□□ -0.54
CLP1-204ENST00000529773 RNASEKQ6P5S7 137 aaKnown RBP11.65□□□□□ -0.54
CLP1-204ENST00000529773 LINC00269Q8N2A0 174 aa11.65□□□□□ -0.54
CLP1-204ENST00000529773 OR5A1Q8NGJ0 315 aa11.65□□□□□ -0.54
CLP1-204ENST00000529773 PRSS3P2Q8NHM4 247 aa11.65□□□□□ -0.54
CLP1-204ENST00000529773 RPL39P62891 51 aaKnown RBP11.64□□□□□ -0.55
CLP1-204ENST00000529773 URB1-AS1Q96HZ7 61 aa11.64□□□□□ -0.55
CLP1-204ENST00000529773 TMEM101Q96IK0 257 aa11.64□□□□□ -0.55
CLP1-204ENST00000529773 Q9HAA7 133 aa11.64□□□□□ -0.55
CLP1-204ENST00000529773 CDC42SE2Q9NRR3 84 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms