RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 IGHV1-24A0A0C4DH33 117 aa5.65□□□□□ -1.5
VPS11-203ENST00000529545 SMIM17P0DL12 118 aa5.65□□□□□ -1.5
VPS11-203ENST00000529545 ATP6V0CP27449 155 aa5.65□□□□□ -1.5
VPS11-203ENST00000529545 KRTAP10-8P60410 259 aa5.65□□□□□ -1.5
VPS11-203ENST00000529545 UBE2G2P60604 165 aa5.65□□□□□ -1.5
VPS11-203ENST00000529545 COX6A2Q02221 97 aa5.65□□□□□ -1.5
VPS11-203ENST00000529545 ZNF674Q2M3X9 581 aa5.65□□□□□ -1.5
VPS11-203ENST00000529545 CFAP161Q6P656 301 aa5.65□□□□□ -1.5
VPS11-203ENST00000529545 SPINK6Q6UWN8 80 aa5.65□□□□□ -1.5
VPS11-203ENST00000529545 NTM-AS1Q6ZSK4 140 aa5.65□□□□□ -1.5
VPS11-203ENST00000529545 COX8CQ7Z4L0 72 aa5.65□□□□□ -1.5
VPS11-203ENST00000529545 FMC1Q96HJ9 113 aa5.65□□□□□ -1.5
VPS11-203ENST00000529545 VAX2Q9UIW0 290 aa5.65□□□□□ -1.5
VPS11-203ENST00000529545 TNFSF18Q9UNG2 199 aa5.65□□□□□ -1.5
VPS11-203ENST00000529545 IGKV2-24A0A0C4DH68 120 aa5.64□□□□□ -1.51
VPS11-203ENST00000529545 NDUFS6O75380 124 aaKnown RBP5.64□□□□□ -1.51
VPS11-203ENST00000529545 SLPIP03973 132 aa5.64□□□□□ -1.51
VPS11-203ENST00000529545 RPS10P46783 165 aaKnown RBP5.64□□□□□ -1.51
VPS11-203ENST00000529545 RAB5CP51148 216 aa5.64□□□□□ -1.51
VPS11-203ENST00000529545 RAB14P61106 215 aa5.64□□□□□ -1.51
VPS11-203ENST00000529545 IQCJQ1A5X6 159 aa5.64□□□□□ -1.51
VPS11-203ENST00000529545 SPANXN1Q5VSR9 72 aa5.64□□□□□ -1.51
VPS11-203ENST00000529545 TMUB2Q71RG4 321 aa5.64□□□□□ -1.51
VPS11-203ENST00000529545 STPG4Q8N801 248 aa5.64□□□□□ -1.51
VPS11-203ENST00000529545 LYPD6BQ8NI32 183 aa5.64□□□□□ -1.51
VPS11-203ENST00000529545 SULT1A2P50226 295 aa5.63□□□□□ -1.51
VPS11-203ENST00000529545 C10orf91Q5T1B1 145 aa5.63□□□□□ -1.51
VPS11-203ENST00000529545 LINC00518Q8N0U6 118 aa5.63□□□□□ -1.51
VPS11-203ENST00000529545 OR10AG1Q8NH19 301 aa5.63□□□□□ -1.51
VPS11-203ENST00000529545 TMEM243Q9BU79 118 aa5.63□□□□□ -1.51
VPS11-203ENST00000529545 CTXND1A0A1B0GTU2 59 aa5.62□□□□□ -1.51
VPS11-203ENST00000529545 A0A1B0GUV1 79 aa5.62□□□□□ -1.51
VPS11-203ENST00000529545 FAM74A7A6NL05 159 aa5.62□□□□□ -1.51
VPS11-203ENST00000529545 H7C1H1 209 aa5.62□□□□□ -1.51
VPS11-203ENST00000529545 C20orf203Q8NBC4 194 aa5.62□□□□□ -1.51
VPS11-203ENST00000529545 PRSS3P2Q8NHM4 247 aa5.62□□□□□ -1.51
VPS11-203ENST00000529545 AQP10Q96PS8 301 aa5.62□□□□□ -1.51
VPS11-203ENST00000529545 LINC00474Q9P2X8 69 aa5.62□□□□□ -1.51
VPS11-203ENST00000529545 PKIGQ9Y2B9 76 aa5.62□□□□□ -1.51
VPS11-203ENST00000529545 UBE2L6O14933 153 aa5.61□□□□□ -1.51
VPS11-203ENST00000529545 LTAP01374 205 aa5.61□□□□□ -1.51
VPS11-203ENST00000529545 CXCL1P09341 107 aa5.61□□□□□ -1.51
VPS11-203ENST00000529545 AKR1C3P42330 323 aa5.61□□□□□ -1.51
VPS11-203ENST00000529545 SSTP61278 116 aa5.61□□□□□ -1.51
VPS11-203ENST00000529545 Q6ZRP5 223 aa5.61□□□□□ -1.51
VPS11-203ENST00000529545 KCNRGQ8N5I3 272 aa5.61□□□□□ -1.51
VPS11-203ENST00000529545 AP1S3Q96PC3 154 aa5.61□□□□□ -1.51
VPS11-203ENST00000529545 TCEAL7Q9BRU2 100 aa5.61□□□□□ -1.51
VPS11-203ENST00000529545 IGLV4-60A0A075B6I1 120 aa5.6□□□□□ -1.51
VPS11-203ENST00000529545 MUC21A0A0G2JKD1 596 aa5.6□□□□□ -1.51
VPS11-203ENST00000529545 MUC21A0A140T8X8 626 aa5.6□□□□□ -1.51
VPS11-203ENST00000529545 FAM231BA6NCW3 169 aa5.6□□□□□ -1.51
VPS11-203ENST00000529545 GAGE12HA6NDE8 117 aa5.6□□□□□ -1.51
VPS11-203ENST00000529545 SNAI2O43623 268 aa5.6□□□□□ -1.51
VPS11-203ENST00000529545 OR5AL1P0C617 328 aa5.6□□□□□ -1.51
VPS11-203ENST00000529545 HIGD2BQ4VC39 106 aa5.6□□□□□ -1.51
VPS11-203ENST00000529545 CST9LP1Q5W188 147 aa5.6□□□□□ -1.51
VPS11-203ENST00000529545 C15orf56Q8N910 161 aa5.6□□□□□ -1.51
VPS11-203ENST00000529545 NUDT10Q8NFP7 164 aa5.6□□□□□ -1.51
VPS11-203ENST00000529545 STOML3Q8TAV4 291 aa5.6□□□□□ -1.51
VPS11-203ENST00000529545 NUDT11Q96G61 164 aa5.6□□□□□ -1.51
VPS11-203ENST00000529545 BORCS7-ASMTA0A0B4J1R7 106 aa5.59□□□□□ -1.51
VPS11-203ENST00000529545 RAB19A4D1S5 217 aa5.59□□□□□ -1.51
VPS11-203ENST00000529545 S100A9P06702 114 aaKnown RBP5.59□□□□□ -1.51
VPS11-203ENST00000529545 MGPP08493 103 aa5.59□□□□□ -1.51
VPS11-203ENST00000529545 SRSF9Q13242 221 aaKnown RBP eCLIP5.59□□□□□ -1.51
VPS11-203ENST00000529545 ZNF345Q14585 488 aa5.59□□□□□ -1.51
VPS11-203ENST00000529545 AKR1C8PQ5T2L2 129 aa5.59□□□□□ -1.51
VPS11-203ENST00000529545 UQCC3Q6UW78 93 aa5.59□□□□□ -1.51
VPS11-203ENST00000529545 A0A096LNI7 61 aa5.58□□□□□ -1.52
VPS11-203ENST00000529545 IGKV3OR2-268A0A0C4DH90 116 aa5.58□□□□□ -1.52
VPS11-203ENST00000529545 A0A0U1RQV1 116 aa5.58□□□□□ -1.52
VPS11-203ENST00000529545 M0QY20 66 aa5.58□□□□□ -1.52
VPS11-203ENST00000529545 FHITP49789 147 aa5.58□□□□□ -1.52
VPS11-203ENST00000529545 ZNF726P1Q15940 193 aa5.58□□□□□ -1.52
VPS11-203ENST00000529545 GFRA4Q9GZZ7 299 aa5.58□□□□□ -1.52
VPS11-203ENST00000529545 GVQW2A0A096LPI5 108 aaPredicted RBP5.57□□□□□ -1.52
VPS11-203ENST00000529545 MAP1LC3B2A6NCE7 125 aa5.57□□□□□ -1.52
VPS11-203ENST00000529545 AMTP48728 403 aa5.57□□□□□ -1.52
VPS11-203ENST00000529545 S100A12P80511 92 aa5.57□□□□□ -1.52
VPS11-203ENST00000529545 COTL1Q14019 142 aa5.57□□□□□ -1.52
VPS11-203ENST00000529545 ALKAL2Q6UX46 152 aa5.57□□□□□ -1.52
VPS11-203ENST00000529545 ZNF664Q8N3J9 261 aa5.57□□□□□ -1.52
VPS11-203ENST00000529545 INO80EQ8NBZ0 244 aaPredicted RBP5.57□□□□□ -1.52
VPS11-203ENST00000529545 PGLYRP4Q96LB8 373 aa5.57□□□□□ -1.52
VPS11-203ENST00000529545 MAP1LC3BQ9GZQ8 125 aa5.57□□□□□ -1.52
VPS11-203ENST00000529545 CARHSP1Q9Y2V2 147 aaKnown RBP5.57□□□□□ -1.52
VPS11-203ENST00000529545 TMEM218A2RU14 115 aa5.56□□□□□ -1.52
VPS11-203ENST00000529545 FAM74A3Q4VXF1 159 aa5.56□□□□□ -1.52
VPS11-203ENST00000529545 AMMECR1LQ6DCA0 310 aa5.56□□□□□ -1.52
VPS11-203ENST00000529545 RPL7L1Q6DKI1 246 aaKnown RBP5.56□□□□□ -1.52
VPS11-203ENST00000529545 SUMO4Q6EEV6 95 aa5.56□□□□□ -1.52
VPS11-203ENST00000529545 RASL11AQ6T310 242 aa5.56□□□□□ -1.52
VPS11-203ENST00000529545 BAGE2Q86Y30 109 aa5.56□□□□□ -1.52
VPS11-203ENST00000529545 CHCHD10Q8WYQ3 142 aaPredicted RBP5.56□□□□□ -1.52
VPS11-203ENST00000529545 TPPP3Q9BW30 176 aa5.56□□□□□ -1.52
VPS11-203ENST00000529545 TRAV26-2A0A0B4J265 109 aa5.55□□□□□ -1.52
VPS11-203ENST00000529545 TEX46H3BTG2 121 aa5.55□□□□□ -1.52
VPS11-203ENST00000529545 ARPC5O15511 151 aa5.55□□□□□ -1.52
VPS11-203ENST00000529545 CACNG7P62955 275 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms