RNA–Protein interactions for RNA: ENST00000529505.1

SMIM19-208, Transcript of small integral membrane protein 19, human

TSL 3

Gene SMIM19, Length 920 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMIM19-208	ENST00000529505	LINC00862	A6NCI5	91 aa		14.01	□□□□□ -0.17
SMIM19-208	ENST00000529505	PSCA	O43653	123 aa		14.01	□□□□□ -0.17
SMIM19-208	ENST00000529505	MPV17L2	Q567V2	206 aa		14.01	□□□□□ -0.17
SMIM19-208	ENST00000529505	FAM104B	Q5XKR9	115 aa		14.01	□□□□□ -0.17
SMIM19-208	ENST00000529505	RMI2	Q96E14	147 aa		14.01	□□□□□ -0.17
SMIM19-208	ENST00000529505	TMEM243	Q9BU79	118 aa		14.01	□□□□□ -0.17
SMIM19-208	ENST00000529505	PGPEP1	Q9NXJ5	209 aa		14.01	□□□□□ -0.17
SMIM19-208	ENST00000529505		A0A1B0GUV1	79 aa		14	□□□□□ -0.17
SMIM19-208	ENST00000529505		A0A1B0GXF2	115 aa		14	□□□□□ -0.17
SMIM19-208	ENST00000529505	SDHAF1	A6NFY7	115 aa		14	□□□□□ -0.17
SMIM19-208	ENST00000529505	CAMP	P49913	170 aa		14	□□□□□ -0.17
SMIM19-208	ENST00000529505	ATP5L2	Q7Z4Y8	100 aa		14	□□□□□ -0.17
SMIM19-208	ENST00000529505		Q8N1X5	172 aa		14	□□□□□ -0.17
SMIM19-208	ENST00000529505	SEC11C	Q9BY50	192 aa		14	□□□□□ -0.17
SMIM19-208	ENST00000529505	ST20	Q9HBF5	79 aa		14	□□□□□ -0.17
SMIM19-208	ENST00000529505		F8W036	122 aa		13.99	□□□□□ -0.17
SMIM19-208	ENST00000529505		I3L3M4	83 aa		13.99	□□□□□ -0.17
SMIM19-208	ENST00000529505	RBX1	P62877	108 aa		13.99	□□□□□ -0.17
SMIM19-208	ENST00000529505	HBB	P68871	147 aa		13.99	□□□□□ -0.17
SMIM19-208	ENST00000529505	COMMD7	Q86VX2	200 aa		13.99	□□□□□ -0.17
SMIM19-208	ENST00000529505	LRCOL1	A6NCL2	159 aa		13.98	□□□□□ -0.17
SMIM19-208	ENST00000529505	GAS8-AS1	O95177	125 aa		13.98	□□□□□ -0.17
SMIM19-208	ENST00000529505	ADCYAP1	P18509	176 aa		13.98	□□□□□ -0.17
SMIM19-208	ENST00000529505	POLR2K	P53803	58 aa	Known RBP	13.98	□□□□□ -0.17
SMIM19-208	ENST00000529505	GAGE6	Q13070	117 aa		13.98	□□□□□ -0.17
SMIM19-208	ENST00000529505	UBE2W	Q96B02	151 aa		13.98	□□□□□ -0.17
SMIM19-208	ENST00000529505	AMT	P48728	403 aa		13.97	□□□□□ -0.17
SMIM19-208	ENST00000529505		Q8N976	141 aa		13.97	□□□□□ -0.17
SMIM19-208	ENST00000529505	IMMP2L	Q96T52	175 aa		13.97	□□□□□ -0.17
SMIM19-208	ENST00000529505	TMEM70	Q9BUB7	260 aa		13.97	□□□□□ -0.17
SMIM19-208	ENST00000529505	TRBV27	A0A0K0K1C4	114 aa		13.96	□□□□□ -0.17
SMIM19-208	ENST00000529505		H7C423	109 aa		13.96	□□□□□ -0.17
SMIM19-208	ENST00000529505	ANG	P03950	147 aa	Known RBP	13.96	□□□□□ -0.17
SMIM19-208	ENST00000529505	PMCH	P20382	165 aa		13.96	□□□□□ -0.17
SMIM19-208	ENST00000529505	RPS10	P46783	165 aa	Known RBP	13.96	□□□□□ -0.17
SMIM19-208	ENST00000529505	MRPL51	Q4U2R6	128 aa	Known RBP	13.96	□□□□□ -0.17
SMIM19-208	ENST00000529505	MRPL54	Q6P161	138 aa	Known RBP	13.96	□□□□□ -0.17
SMIM19-208	ENST00000529505	ENHO	Q6UWT2	76 aa		13.96	□□□□□ -0.17
SMIM19-208	ENST00000529505	PRR34	Q9NV39	138 aa		13.96	□□□□□ -0.17
SMIM19-208	ENST00000529505	VCY	O14598	125 aa		13.95	□□□□□ -0.18
SMIM19-208	ENST00000529505	CDPF1	Q6NVV7	123 aa		13.95	□□□□□ -0.18
SMIM19-208	ENST00000529505	NRAC	Q8N912	160 aa		13.95	□□□□□ -0.18
SMIM19-208	ENST00000529505	CTDSP1	Q9GZU7	261 aa		13.95	□□□□□ -0.18
SMIM19-208	ENST00000529505	TRBV24-1	A0A075B6N3	115 aa		13.94	□□□□□ -0.18
SMIM19-208	ENST00000529505	UBE2L6	O14933	153 aa		13.94	□□□□□ -0.18
SMIM19-208	ENST00000529505	CRP	P02741	224 aa		13.94	□□□□□ -0.18
SMIM19-208	ENST00000529505	MIA	Q16674	131 aa		13.94	□□□□□ -0.18
SMIM19-208	ENST00000529505	C10orf91	Q5T1B1	145 aa		13.94	□□□□□ -0.18
SMIM19-208	ENST00000529505	APCS	P02743	223 aa		13.93	□□□□□ -0.18
SMIM19-208	ENST00000529505	DEFB104A	Q8WTQ1	72 aa		13.93	□□□□□ -0.18
SMIM19-208	ENST00000529505	BTF3L4	Q96K17	158 aa		13.93	□□□□□ -0.18
SMIM19-208	ENST00000529505	C20orf78	Q9BR46	151 aa		13.93	□□□□□ -0.18
SMIM19-208	ENST00000529505	IGKV2D-24	A0A075B6R9	120 aa		13.92	□□□□□ -0.18
SMIM19-208	ENST00000529505	SMKR1	H3BMG3	65 aa		13.92	□□□□□ -0.18
SMIM19-208	ENST00000529505	PPBP	P02775	128 aa		13.92	□□□□□ -0.18
SMIM19-208	ENST00000529505	CKS2	P33552	79 aa		13.92	□□□□□ -0.18
SMIM19-208	ENST00000529505	SUMO2	P61956	95 aa	Known RBP	13.92	□□□□□ -0.18
SMIM19-208	ENST00000529505	LINC00269	Q8N2A0	174 aa		13.92	□□□□□ -0.18
SMIM19-208	ENST00000529505	TSHB	P01222	138 aa		13.91	□□□□□ -0.18
SMIM19-208	ENST00000529505	ESD	P10768	282 aa		13.91	□□□□□ -0.18
SMIM19-208	ENST00000529505	RPL32	P62910	135 aa	Known RBP	13.91	□□□□□ -0.18
SMIM19-208	ENST00000529505	C20orf203	Q8NBC4	194 aa		13.91	□□□□□ -0.18
SMIM19-208	ENST00000529505	C1orf43	Q9BWL3	253 aa		13.91	□□□□□ -0.18
SMIM19-208	ENST00000529505	TMEM242	Q9NWH2	141 aa		13.91	□□□□□ -0.18
SMIM19-208	ENST00000529505	IGLV4-60	A0A075B6I1	120 aa		13.89	□□□□□ -0.19
SMIM19-208	ENST00000529505	PHOX2A	O14813	284 aa		13.89	□□□□□ -0.19
SMIM19-208	ENST00000529505		Q8N814	137 aa		13.89	□□□□□ -0.19
SMIM19-208	ENST00000529505	NTN5	Q8WTR8	489 aa	Predicted RBP	13.89	□□□□□ -0.19
SMIM19-208	ENST00000529505	CARHSP1	Q9Y2V2	147 aa	Known RBP	13.89	□□□□□ -0.19
SMIM19-208	ENST00000529505	TRAV8-4	A0A0B4J246	113 aa		13.88	□□□□□ -0.19
SMIM19-208	ENST00000529505	REG3A	Q06141	175 aa		13.88	□□□□□ -0.19
SMIM19-208	ENST00000529505	KIR2DL4	Q99706	377 aa		13.88	□□□□□ -0.19
SMIM19-208	ENST00000529505	TRAV9-1	A0A075B6T8	112 aa		13.87	□□□□□ -0.19
SMIM19-208	ENST00000529505		D6R8Y8	96 aa		13.87	□□□□□ -0.19
SMIM19-208	ENST00000529505	TNFRSF6B	O95407	300 aa		13.87	□□□□□ -0.19
SMIM19-208	ENST00000529505	ZNF25	P17030	456 aa	Predicted RBP	13.87	□□□□□ -0.19
SMIM19-208	ENST00000529505	FUS	P35637	526 aa	Known RBP eCLIP	13.87	□□□□□ -0.19
SMIM19-208	ENST00000529505	TCAP	O15273	167 aa		13.86	□□□□□ -0.19
SMIM19-208	ENST00000529505	AMMECR1L	Q6DCA0	310 aa		13.86	□□□□□ -0.19
SMIM19-208	ENST00000529505	TMEM136	Q6ZRR5	245 aa		13.86	□□□□□ -0.19
SMIM19-208	ENST00000529505	ORMDL3	Q8N138	153 aa		13.86	□□□□□ -0.19
SMIM19-208	ENST00000529505	BAALC	Q8WXS3	180 aa		13.86	□□□□□ -0.19
SMIM19-208	ENST00000529505	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	13.85	□□□□□ -0.19
SMIM19-208	ENST00000529505	IGKV2-29	A2NJV5	120 aa	Predicted RBP	13.85	□□□□□ -0.19
SMIM19-208	ENST00000529505	FGF6	P10767	208 aa		13.85	□□□□□ -0.19
SMIM19-208	ENST00000529505	C7orf77	A4D0Y5	90 aa		13.84	□□□□□ -0.19
SMIM19-208	ENST00000529505	FCER1G	P30273	86 aa		13.84	□□□□□ -0.19
SMIM19-208	ENST00000529505	RHEB	Q15382	184 aa		13.84	□□□□□ -0.19
SMIM19-208	ENST00000529505	LAMTOR2	Q9Y2Q5	125 aa		13.84	□□□□□ -0.19
SMIM19-208	ENST00000529505	WFDC2	Q14508	124 aa		13.83	□□□□□ -0.2
SMIM19-208	ENST00000529505	RNASEK	Q6P5S7	137 aa	Known RBP	13.83	□□□□□ -0.2
SMIM19-208	ENST00000529505	KRTAP26-1	Q6PEX3	210 aa		13.83	□□□□□ -0.2
SMIM19-208	ENST00000529505	MRPL52	Q86TS9	123 aa	Known RBP	13.83	□□□□□ -0.2
SMIM19-208	ENST00000529505	CLRN3	Q8NCR9	226 aa		13.83	□□□□□ -0.2
SMIM19-208	ENST00000529505	FAT1	Q14517	4588 aa		13.83	□□□□□ -0.2
SMIM19-208	ENST00000529505	PRSS47	A8MTI9	375 aa		13.82	□□□□□ -0.2
SMIM19-208	ENST00000529505	XG	P55808	180 aa		13.82	□□□□□ -0.2
SMIM19-208	ENST00000529505	SMAGP	Q0VAQ4	97 aa		13.82	□□□□□ -0.2
SMIM19-208	ENST00000529505	CLPSL2	Q6UWE3	100 aa		13.82	□□□□□ -0.2
SMIM19-208	ENST00000529505	TMEM101	Q96IK0	257 aa		13.82	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms