RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 AP5S1Q9NUS5 200 aa17.08■□□□□ 0.33
LDLRAD3-203ENST00000528989 FCER1GP30273 86 aa17.07■□□□□ 0.32
LDLRAD3-203ENST00000528989 GTSF1LQ9H1H1 148 aa17.07■□□□□ 0.32
LDLRAD3-203ENST00000528989 NUPR2A6NF83 97 aa17.07■□□□□ 0.32
LDLRAD3-203ENST00000528989 MUC7Q8TAX7 377 aa17.07■□□□□ 0.32
LDLRAD3-203ENST00000528989 LINC01546A6NGU7 62 aa17.06■□□□□ 0.32
LDLRAD3-203ENST00000528989 LYPD5Q6UWN5 251 aa17.06■□□□□ 0.32
LDLRAD3-203ENST00000528989 C15orf53Q8NAA6 179 aa17.06■□□□□ 0.32
LDLRAD3-203ENST00000528989 TENM2Q9NT68 2774 aa17.06■□□□□ 0.32
LDLRAD3-203ENST00000528989 LYSTQ99698 3801 aa17.06■□□□□ 0.32
LDLRAD3-203ENST00000528989 LAGE3Q14657 143 aa17.05■□□□□ 0.32
LDLRAD3-203ENST00000528989 PLECQ15149 4684 aaKnown RBP17.05■□□□□ 0.32
LDLRAD3-203ENST00000528989 FAM19A2Q8N3H0 131 aa17.05■□□□□ 0.32
LDLRAD3-203ENST00000528989 ESRGQ1W209 222 aa17.05■□□□□ 0.32
LDLRAD3-203ENST00000528989 COA6Q5JTJ3 125 aaKnown RBP17.05■□□□□ 0.32
LDLRAD3-203ENST00000528989 TRBV6-8A0A0A6YYG3 113 aa17.04■□□□□ 0.32
LDLRAD3-203ENST00000528989 CHCHD7Q9BUK0 85 aa17.04■□□□□ 0.32
LDLRAD3-203ENST00000528989 S100A6P06703 90 aa17.03■□□□□ 0.32
LDLRAD3-203ENST00000528989 PDZD11Q5EBL8 140 aa17.03■□□□□ 0.32
LDLRAD3-203ENST00000528989 SH2D6Q7Z4S9 175 aa17.03■□□□□ 0.32
LDLRAD3-203ENST00000528989 CHCHD1Q96BP2 118 aaKnown RBP17.03■□□□□ 0.32
LDLRAD3-203ENST00000528989 APLNQ9ULZ1 77 aa17.03■□□□□ 0.32
LDLRAD3-203ENST00000528989 A0A096LNJ9 63 aa17.02■□□□□ 0.32
LDLRAD3-203ENST00000528989 AMTP48728 403 aa17.02■□□□□ 0.32
LDLRAD3-203ENST00000528989 SNRPEP62304 92 aaKnown RBP17.02■□□□□ 0.32
LDLRAD3-203ENST00000528989 KLK5Q9Y337 293 aaPredicted RBP17.02■□□□□ 0.32
LDLRAD3-203ENST00000528989 HSBP1O75506 76 aa17.01■□□□□ 0.31
LDLRAD3-203ENST00000528989 RPL39P62891 51 aaKnown RBP17.01■□□□□ 0.31
LDLRAD3-203ENST00000528989 IGKV2D-29A0A075B6S2 120 aaPredicted RBP17.01■□□□□ 0.31
LDLRAD3-203ENST00000528989 IGKV2-29A2NJV5 120 aaPredicted RBP17.01■□□□□ 0.31
LDLRAD3-203ENST00000528989 BTF3P20290 206 aaKnown RBP17.01■□□□□ 0.31
LDLRAD3-203ENST00000528989 IGHV1-24A0A0C4DH33 117 aa17■□□□□ 0.31
LDLRAD3-203ENST00000528989 ESDP10768 282 aa17■□□□□ 0.31
LDLRAD3-203ENST00000528989 ORMDL2Q53FV1 153 aa17■□□□□ 0.31
LDLRAD3-203ENST00000528989 TRBV25-1A0A075B6N4 114 aa16.99■□□□□ 0.31
LDLRAD3-203ENST00000528989 K7EMI3 77 aa16.99■□□□□ 0.31
LDLRAD3-203ENST00000528989 C20orf203Q8NBC4 194 aa16.98■□□□□ 0.31
LDLRAD3-203ENST00000528989 C5orf52A6NGY3 159 aa16.97■□□□□ 0.31
LDLRAD3-203ENST00000528989 C2orf66Q6UXQ4 117 aa16.97■□□□□ 0.31
LDLRAD3-203ENST00000528989 TMEM243Q9BU79 118 aa16.97■□□□□ 0.31
LDLRAD3-203ENST00000528989 LELP1Q5T871 98 aa16.96■□□□□ 0.31
LDLRAD3-203ENST00000528989 CHCHD5Q9BSY4 110 aa16.96■□□□□ 0.31
LDLRAD3-203ENST00000528989 LINC00588Q9Y4M8 146 aa16.96■□□□□ 0.31
LDLRAD3-203ENST00000528989 TMEM97Q5BJF2 176 aa16.95■□□□□ 0.3
LDLRAD3-203ENST00000528989 GAGE6Q13070 117 aa16.95■□□□□ 0.3
LDLRAD3-203ENST00000528989 TIRAPP58753 221 aa16.94■□□□□ 0.3
LDLRAD3-203ENST00000528989 HIST3H2BBQ8N257 126 aa16.94■□□□□ 0.3
LDLRAD3-203ENST00000528989 Q8N3U1 123 aa16.94■□□□□ 0.3
LDLRAD3-203ENST00000528989 HBDP02042 147 aa16.93■□□□□ 0.3
LDLRAD3-203ENST00000528989 FABP4P15090 132 aa16.93■□□□□ 0.3
LDLRAD3-203ENST00000528989 CASC10Q5T4H9 136 aa16.93■□□□□ 0.3
LDLRAD3-203ENST00000528989 TOMM6Q96B49 74 aa16.93■□□□□ 0.3
LDLRAD3-203ENST00000528989 CCL18P55774 89 aa16.92■□□□□ 0.3
LDLRAD3-203ENST00000528989 LINC00173Q6ZV60 143 aa16.92■□□□□ 0.3
LDLRAD3-203ENST00000528989 WFDC10BQ8IUB3 73 aa16.92■□□□□ 0.3
LDLRAD3-203ENST00000528989 CYSLTR1Q9Y271 337 aa16.92■□□□□ 0.3
LDLRAD3-203ENST00000528989 IFITM10A6NMD0 228 aa16.91■□□□□ 0.3
LDLRAD3-203ENST00000528989 TMEM262E9PQX1 116 aa16.91■□□□□ 0.3
LDLRAD3-203ENST00000528989 OPRPNQ99935 248 aaPredicted RBP16.91■□□□□ 0.3
LDLRAD3-203ENST00000528989 UBE2L6O14933 153 aa16.9■□□□□ 0.3
LDLRAD3-203ENST00000528989 UBE2D4Q9Y2X8 147 aa16.9■□□□□ 0.3
LDLRAD3-203ENST00000528989 FGF6P10767 208 aa16.89■□□□□ 0.29
LDLRAD3-203ENST00000528989 Q8N976 141 aa16.89■□□□□ 0.29
LDLRAD3-203ENST00000528989 TCTAP57738 103 aa16.88■□□□□ 0.29
LDLRAD3-203ENST00000528989 TRAV8-6A0A0B4J262 113 aa16.88■□□□□ 0.29
LDLRAD3-203ENST00000528989 IGIPA6NJ69 53 aa16.88■□□□□ 0.29
LDLRAD3-203ENST00000528989 MPV17L2Q567V2 206 aa16.88■□□□□ 0.29
LDLRAD3-203ENST00000528989 FAM104AQ969W3 186 aa16.88■□□□□ 0.29
LDLRAD3-203ENST00000528989 SCGB3A1Q96QR1 104 aa16.88■□□□□ 0.29
LDLRAD3-203ENST00000528989 IGLV4-60A0A075B6I1 120 aa16.86■□□□□ 0.29
LDLRAD3-203ENST00000528989 LEPROTL1O95214 131 aa16.86■□□□□ 0.29
LDLRAD3-203ENST00000528989 TMEM18Q96B42 140 aa16.86■□□□□ 0.29
LDLRAD3-203ENST00000528989 HIST1H2BLQ99880 126 aa16.86■□□□□ 0.29
LDLRAD3-203ENST00000528989 MRPS16Q9Y3D3 137 aaKnown RBP16.86■□□□□ 0.29
LDLRAD3-203ENST00000528989 G0S2P27469 103 aa16.86■□□□□ 0.29
LDLRAD3-203ENST00000528989 S100A2P29034 98 aa16.86■□□□□ 0.29
LDLRAD3-203ENST00000528989 RNASE13Q5GAN3 156 aaKnown RBP16.85■□□□□ 0.29
LDLRAD3-203ENST00000528989 AMMECR1LQ6DCA0 310 aa16.85■□□□□ 0.29
LDLRAD3-203ENST00000528989 C3orf84H3BNL1 204 aa16.84■□□□□ 0.29
LDLRAD3-203ENST00000528989 ERASQ7Z444 233 aa16.84■□□□□ 0.29
LDLRAD3-203ENST00000528989 H7C423 109 aa16.84■□□□□ 0.29
LDLRAD3-203ENST00000528989 RBX1P62877 108 aa16.84■□□□□ 0.29
LDLRAD3-203ENST00000528989 ZC2HC1BQ5TFG8 222 aa16.84■□□□□ 0.29
LDLRAD3-203ENST00000528989 MRPL52Q86TS9 123 aaKnown RBP16.84■□□□□ 0.29
LDLRAD3-203ENST00000528989 DNAH1Q9P2D7 4330 aa16.83■□□□□ 0.29
LDLRAD3-203ENST00000528989 IGHV3-30P01768 117 aa16.83■□□□□ 0.28
LDLRAD3-203ENST00000528989 IGHV3-33P01772 117 aa16.83■□□□□ 0.28
LDLRAD3-203ENST00000528989 IGHV3-30-3P0DP02 117 aa16.83■□□□□ 0.28
LDLRAD3-203ENST00000528989 IGHV3-30-5P0DP03 117 aa16.83■□□□□ 0.28
LDLRAD3-203ENST00000528989 A0A087WX48 190 aa16.82■□□□□ 0.28
LDLRAD3-203ENST00000528989 UBE2DNLQ8IWF7 75 aa16.82■□□□□ 0.28
LDLRAD3-203ENST00000528989 DGAT2L7PQ6IED9 249 aa16.82■□□□□ 0.28
LDLRAD3-203ENST00000528989 SPANXA1Q9NS26 97 aa16.82■□□□□ 0.28
LDLRAD3-203ENST00000528989 PYGO1Q9Y3Y4 419 aa16.82■□□□□ 0.28
LDLRAD3-203ENST00000528989 IGLV4-3A0A075B6K6 122 aa16.81■□□□□ 0.28
LDLRAD3-203ENST00000528989 Q6ZUT4 128 aa16.81■□□□□ 0.28
LDLRAD3-203ENST00000528989 IFI27L1Q96BM0 104 aa16.8■□□□□ 0.28
LDLRAD3-203ENST00000528989 TIMM17AQ99595 171 aa16.8■□□□□ 0.28
LDLRAD3-203ENST00000528989 UPK3BQ9BT76 320 aa16.8■□□□□ 0.28
LDLRAD3-203ENST00000528989 TIMM21Q9BVV7 248 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms