RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 H7C1H1 209 aa8.46□□□□□ -1.06
TRAF3IP2-211ENST00000528599 LEPROTL1O95214 131 aa8.46□□□□□ -1.06
TRAF3IP2-211ENST00000528599 DDTP30046 118 aa8.46□□□□□ -1.06
TRAF3IP2-211ENST00000528599 GAGE1Q13065 139 aa8.46□□□□□ -1.06
TRAF3IP2-211ENST00000528599 GAGE4Q13068 117 aa8.46□□□□□ -1.06
TRAF3IP2-211ENST00000528599 GAGE5Q13069 117 aa8.46□□□□□ -1.06
TRAF3IP2-211ENST00000528599 GAGE13Q4V321 117 aa8.46□□□□□ -1.06
TRAF3IP2-211ENST00000528599 FA2HQ7L5A8 372 aa8.46□□□□□ -1.06
TRAF3IP2-211ENST00000528599 NRACQ8N912 160 aa8.46□□□□□ -1.06
TRAF3IP2-211ENST00000528599 HSPB8Q9UJY1 196 aa8.46□□□□□ -1.06
TRAF3IP2-211ENST00000528599 LINC00694P0DN24 101 aa8.45□□□□□ -1.06
TRAF3IP2-211ENST00000528599 ZNRF2Q8NHG8 242 aa8.45□□□□□ -1.06
TRAF3IP2-211ENST00000528599 TMEM70Q9BUB7 260 aa8.45□□□□□ -1.06
TRAF3IP2-211ENST00000528599 A0A096LPF7 62 aa8.44□□□□□ -1.06
TRAF3IP2-211ENST00000528599 NUDT3O95989 172 aa8.44□□□□□ -1.06
TRAF3IP2-211ENST00000528599 IFI27P40305 119 aaPredicted RBP8.44□□□□□ -1.06
TRAF3IP2-211ENST00000528599 SPATA12Q7Z6I5 190 aa8.44□□□□□ -1.06
TRAF3IP2-211ENST00000528599 ICOSQ9Y6W8 199 aa8.44□□□□□ -1.06
TRAF3IP2-211ENST00000528599 TRBV7-3A0A075B6L6 115 aa8.43□□□□□ -1.06
TRAF3IP2-211ENST00000528599 NPYP01303 97 aa8.43□□□□□ -1.06
TRAF3IP2-211ENST00000528599 UBE2D3P61077 147 aa8.43□□□□□ -1.06
TRAF3IP2-211ENST00000528599 UBE2D2P62837 147 aa8.43□□□□□ -1.06
TRAF3IP2-211ENST00000528599 RPL36AP83881 106 aaKnown RBP8.43□□□□□ -1.06
TRAF3IP2-211ENST00000528599 MRPL23Q16540 153 aaKnown RBP8.43□□□□□ -1.06
TRAF3IP2-211ENST00000528599 PET117Q6UWS5 81 aa8.43□□□□□ -1.06
TRAF3IP2-211ENST00000528599 RPL36ALQ969Q0 106 aaKnown RBP8.43□□□□□ -1.06
TRAF3IP2-211ENST00000528599 DNAJC30Q96LL9 226 aa8.43□□□□□ -1.06
TRAF3IP2-211ENST00000528599 PRO1933Q9H354 126 aa8.43□□□□□ -1.06
TRAF3IP2-211ENST00000528599 MAP1LC3AQ9H492 121 aa8.43□□□□□ -1.06
TRAF3IP2-211ENST00000528599 NXT2Q9NPJ8 142 aaKnown RBP8.43□□□□□ -1.06
TRAF3IP2-211ENST00000528599 KLK5Q9Y337 293 aaPredicted RBP8.43□□□□□ -1.06
TRAF3IP2-211ENST00000528599 TNFRSF18Q9Y5U5 241 aa8.43□□□□□ -1.06
TRAF3IP2-211ENST00000528599 TRBV6-5A0A0K0K1A5 114 aa8.43□□□□□ -1.06
TRAF3IP2-211ENST00000528599 SYS1-DBNDD2H3BUS1 97 aa8.43□□□□□ -1.06
TRAF3IP2-211ENST00000528599 TNFRSF6BO95407 300 aa8.43□□□□□ -1.06
TRAF3IP2-211ENST00000528599 C15orf53Q8NAA6 179 aa8.43□□□□□ -1.06
TRAF3IP2-211ENST00000528599 VAMP8Q9BV40 100 aa8.43□□□□□ -1.06
TRAF3IP2-211ENST00000528599 APLNQ9ULZ1 77 aa8.43□□□□□ -1.06
TRAF3IP2-211ENST00000528599 C20orf202A1L168 122 aa8.42□□□□□ -1.06
TRAF3IP2-211ENST00000528599 MAP1LC3CQ9BXW4 147 aa8.42□□□□□ -1.06
TRAF3IP2-211ENST00000528599 HYDINQ4G0P3 5121 aa8.41□□□□□ -1.06
TRAF3IP2-211ENST00000528599 PPP1R17O96001 155 aa8.41□□□□□ -1.06
TRAF3IP2-211ENST00000528599 CTAG1AP78358 180 aa8.41□□□□□ -1.06
TRAF3IP2-211ENST00000528599 ATP6V0E2Q8NHE4 81 aa8.41□□□□□ -1.06
TRAF3IP2-211ENST00000528599 ST20Q9HBF5 79 aa8.41□□□□□ -1.06
TRAF3IP2-211ENST00000528599 A0A096LNJ9 63 aa8.4□□□□□ -1.06
TRAF3IP2-211ENST00000528599 IGHV3-38A0A0C4DH36 116 aa8.4□□□□□ -1.06
TRAF3IP2-211ENST00000528599 LOC389332A0A1B0GUA5 103 aa8.4□□□□□ -1.06
TRAF3IP2-211ENST00000528599 SDHAF1A6NFY7 115 aa8.4□□□□□ -1.06
TRAF3IP2-211ENST00000528599 POLR2KP53803 58 aaKnown RBP8.4□□□□□ -1.06
TRAF3IP2-211ENST00000528599 SUMO2P61956 95 aaKnown RBP8.4□□□□□ -1.06
TRAF3IP2-211ENST00000528599 NEGR1Q7Z3B1 354 aa8.4□□□□□ -1.06
TRAF3IP2-211ENST00000528599 Q8N8P6 123 aa8.4□□□□□ -1.06
TRAF3IP2-211ENST00000528599 IGLV2-18A0A075B6J9 118 aa8.4□□□□□ -1.07
TRAF3IP2-211ENST00000528599 K7EMI3 77 aa8.4□□□□□ -1.07
TRAF3IP2-211ENST00000528599 HBDP02042 147 aa8.4□□□□□ -1.07
TRAF3IP2-211ENST00000528599 DEFB104AQ8WTQ1 72 aa8.4□□□□□ -1.07
TRAF3IP2-211ENST00000528599 C14orf144Q96I85 54 aa8.4□□□□□ -1.07
TRAF3IP2-211ENST00000528599 C20orf78Q9BR46 151 aa8.4□□□□□ -1.07
TRAF3IP2-211ENST00000528599 MIEN1Q9BRT3 115 aa8.4□□□□□ -1.07
TRAF3IP2-211ENST00000528599 TRAV9-2A0A087WT02 112 aa8.39□□□□□ -1.07
TRAF3IP2-211ENST00000528599 TCTAP57738 103 aa8.39□□□□□ -1.07
TRAF3IP2-211ENST00000528599 ESRGQ1W209 222 aa8.39□□□□□ -1.07
TRAF3IP2-211ENST00000528599 LYPD5Q6UWN5 251 aa8.39□□□□□ -1.07
TRAF3IP2-211ENST00000528599 LINC00173Q6ZV60 143 aa8.39□□□□□ -1.07
TRAF3IP2-211ENST00000528599 SH2D6Q7Z4S9 175 aa8.39□□□□□ -1.07
TRAF3IP2-211ENST00000528599 RYR2Q92736 4967 aa8.38□□□□□ -1.07
TRAF3IP2-211ENST00000528599 TRBV27A0A0K0K1C4 114 aa8.38□□□□□ -1.07
TRAF3IP2-211ENST00000528599 FCER1GP30273 86 aa8.38□□□□□ -1.07
TRAF3IP2-211ENST00000528599 LBHQ53QV2 105 aaPredicted RBP8.38□□□□□ -1.07
TRAF3IP2-211ENST00000528599 LINC01545Q5VT33 79 aa8.38□□□□□ -1.07
TRAF3IP2-211ENST00000528599 DAZ4Q86SG3 579 aaKnown RBP8.38□□□□□ -1.07
TRAF3IP2-211ENST00000528599 MRPL52Q86TS9 123 aaKnown RBP8.38□□□□□ -1.07
TRAF3IP2-211ENST00000528599 GTSF1LQ9H1H1 148 aa8.38□□□□□ -1.07
TRAF3IP2-211ENST00000528599 DAZ3Q9NR90 486 aaKnown RBP8.38□□□□□ -1.07
TRAF3IP2-211ENST00000528599 PAM16Q9Y3D7 125 aa8.38□□□□□ -1.07
TRAF3IP2-211ENST00000528599 KMT2AQ03164 3969 aa8.38□□□□□ -1.07
TRAF3IP2-211ENST00000528599 RPL32P62910 135 aaKnown RBP8.37□□□□□ -1.07
TRAF3IP2-211ENST00000528599 NTM-AS1Q6ZSK4 140 aa8.37□□□□□ -1.07
TRAF3IP2-211ENST00000528599 SMIM2Q9BVW6 85 aa8.37□□□□□ -1.07
TRAF3IP2-211ENST00000528599 I3L3M4 83 aa8.37□□□□□ -1.07
TRAF3IP2-211ENST00000528599 VCYO14598 125 aa8.37□□□□□ -1.07
TRAF3IP2-211ENST00000528599 SPATA45Q537H7 98 aa8.37□□□□□ -1.07
TRAF3IP2-211ENST00000528599 TSHBP01222 138 aa8.36□□□□□ -1.07
TRAF3IP2-211ENST00000528599 IGLC3P0DOY3 106 aa8.36□□□□□ -1.07
TRAF3IP2-211ENST00000528599 TIRAPP58753 221 aa8.36□□□□□ -1.07
TRAF3IP2-211ENST00000528599 DNAH1Q9P2D7 4330 aa8.35□□□□□ -1.07
TRAF3IP2-211ENST00000528599 COTL1Q14019 142 aa8.35□□□□□ -1.07
TRAF3IP2-211ENST00000528599 LGALS9CQ6DKI2 356 aa8.35□□□□□ -1.07
TRAF3IP2-211ENST00000528599 UQCR10Q9UDW1 63 aa8.35□□□□□ -1.07
TRAF3IP2-211ENST00000528599 LINC00588Q9Y4M8 146 aa8.35□□□□□ -1.07
TRAF3IP2-211ENST00000528599 TRBV6-8A0A0A6YYG3 113 aa8.34□□□□□ -1.07
TRAF3IP2-211ENST00000528599 LAGE3Q14657 143 aa8.34□□□□□ -1.07
TRAF3IP2-211ENST00000528599 IFI27L1Q96BM0 104 aa8.34□□□□□ -1.07
TRAF3IP2-211ENST00000528599 ALMS1Q8TCU4 4167 aa8.34□□□□□ -1.07
TRAF3IP2-211ENST00000528599 TCAPO15273 167 aa8.34□□□□□ -1.08
TRAF3IP2-211ENST00000528599 CCL18P55774 89 aa8.34□□□□□ -1.08
TRAF3IP2-211ENST00000528599 LELP1Q5T871 98 aa8.34□□□□□ -1.08
TRAF3IP2-211ENST00000528599 KIR2DL4Q99706 377 aa8.34□□□□□ -1.08
TRAF3IP2-211ENST00000528599 ATP5LO75964 103 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms