RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 CEMP1Q6PRD7 247 aaPredicted RBP13.51□□□□□ -0.25
LTBP3-210ENST00000528516 LINC00158P58513 81 aa13.5□□□□□ -0.25
LTBP3-210ENST00000528516 MUSTN1Q8IVN3 82 aa13.5□□□□□ -0.25
LTBP3-210ENST00000528516 M0R2P5 195 aa13.5□□□□□ -0.25
LTBP3-210ENST00000528516 DAND5Q8N907 189 aa13.5□□□□□ -0.25
LTBP3-210ENST00000528516 Q96MF0 132 aa13.5□□□□□ -0.25
LTBP3-210ENST00000528516 HOXD3P31249 432 aaPredicted RBP13.5□□□□□ -0.25
LTBP3-210ENST00000528516 SRSF2Q01130 221 aaKnown RBP13.5□□□□□ -0.25
LTBP3-210ENST00000528516 LMO4P61968 165 aa13.49□□□□□ -0.25
LTBP3-210ENST00000528516 LINC01356Q8N9X3 169 aa13.49□□□□□ -0.25
LTBP3-210ENST00000528516 IGHG4P01861 327 aa13.49□□□□□ -0.25
LTBP3-210ENST00000528516 PRIMA1Q86XR5 153 aa13.49□□□□□ -0.25
LTBP3-210ENST00000528516 SLC25A29Q8N8R3 303 aa13.49□□□□□ -0.25
LTBP3-210ENST00000528516 SIRPDQ9H106 197 aa13.49□□□□□ -0.25
LTBP3-210ENST00000528516 CHD6Q8TD26 2715 aa13.48□□□□□ -0.25
LTBP3-210ENST00000528516 COX8CQ7Z4L0 72 aa13.48□□□□□ -0.25
LTBP3-210ENST00000528516 IGHV3-33P01772 117 aa13.47□□□□□ -0.25
LTBP3-210ENST00000528516 P0DMU3 169 aa13.47□□□□□ -0.25
LTBP3-210ENST00000528516 FAM231AP0DMU4 169 aa13.47□□□□□ -0.25
LTBP3-210ENST00000528516 FAM231CP0DMU5 169 aa13.47□□□□□ -0.25
LTBP3-210ENST00000528516 C9orf153Q5TBE3 101 aa13.47□□□□□ -0.25
LTBP3-210ENST00000528516 RELNP78509 3460 aa13.47□□□□□ -0.25
LTBP3-210ENST00000528516 TSPEAR-AS2P59090 65 aa13.47□□□□□ -0.25
LTBP3-210ENST00000528516 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.47□□□□□ -0.25
LTBP3-210ENST00000528516 SUMO4Q6EEV6 95 aa13.46□□□□□ -0.25
LTBP3-210ENST00000528516 PFN2P35080 140 aa13.46□□□□□ -0.25
LTBP3-210ENST00000528516 CLPSL2Q6UWE3 100 aa13.46□□□□□ -0.25
LTBP3-210ENST00000528516 A0A1W2PPR1 153 aa13.46□□□□□ -0.26
LTBP3-210ENST00000528516 RBAKDNA6NC62 111 aa13.46□□□□□ -0.26
LTBP3-210ENST00000528516 LY6G5BQ8NDX9 201 aa13.45□□□□□ -0.26
LTBP3-210ENST00000528516 ZNF415Q09FC8 603 aa13.45□□□□□ -0.26
LTBP3-210ENST00000528516 FAM236AA0A1B0GUQ0 79 aa13.45□□□□□ -0.26
LTBP3-210ENST00000528516 FAM236BA0A1B0GV22 79 aa13.45□□□□□ -0.26
LTBP3-210ENST00000528516 RS1O15537 224 aa13.45□□□□□ -0.26
LTBP3-210ENST00000528516 RPL36AP83881 106 aaKnown RBP13.45□□□□□ -0.26
LTBP3-210ENST00000528516 RPL36ALQ969Q0 106 aaKnown RBP13.45□□□□□ -0.26
LTBP3-210ENST00000528516 C20orf173Q96LM9 149 aa13.45□□□□□ -0.26
LTBP3-210ENST00000528516 F8P00451 2351 aa13.45□□□□□ -0.26
LTBP3-210ENST00000528516 PPDPFQ9H3Y8 114 aa13.45□□□□□ -0.26
LTBP3-210ENST00000528516 CFAP46Q8IYW2 2715 aa13.44□□□□□ -0.26
LTBP3-210ENST00000528516 TRBV10-2A0A0K0K1G8 114 aa13.44□□□□□ -0.26
LTBP3-210ENST00000528516 PAX4O43316 350 aa13.44□□□□□ -0.26
LTBP3-210ENST00000528516 MRPL23Q16540 153 aaKnown RBP13.44□□□□□ -0.26
LTBP3-210ENST00000528516 ZNF575Q86XF7 245 aa13.44□□□□□ -0.26
LTBP3-210ENST00000528516 SBSPONQ8IVN8 264 aa13.44□□□□□ -0.26
LTBP3-210ENST00000528516 NDUFA12Q9UI09 145 aa13.44□□□□□ -0.26
LTBP3-210ENST00000528516 EDN2P20800 178 aa13.43□□□□□ -0.26
LTBP3-210ENST00000528516 ESM1Q9NQ30 184 aa13.43□□□□□ -0.26
LTBP3-210ENST00000528516 LRBAP50851 2863 aa13.43□□□□□ -0.26
LTBP3-210ENST00000528516 ODF3Q96PU9 254 aa13.43□□□□□ -0.26
LTBP3-210ENST00000528516 CLEC2BQ92478 149 aa13.42□□□□□ -0.26
LTBP3-210ENST00000528516 IGHV4OR15-8A0A075B7B6 117 aa13.42□□□□□ -0.26
LTBP3-210ENST00000528516 A0A087WW49 117 aa13.42□□□□□ -0.26
LTBP3-210ENST00000528516 F8W735 103 aaPredicted RBP13.42□□□□□ -0.26
LTBP3-210ENST00000528516 LY6LH3BQJ8 138 aa13.42□□□□□ -0.26
LTBP3-210ENST00000528516 ELANEP08246 267 aa13.42□□□□□ -0.26
LTBP3-210ENST00000528516 I3L3M4 83 aa13.42□□□□□ -0.26
LTBP3-210ENST00000528516 TNFRSF13BO14836 293 aaPredicted RBP13.42□□□□□ -0.26
LTBP3-210ENST00000528516 MAST4O15021 2626 aa13.41□□□□□ -0.26
LTBP3-210ENST00000528516 M0QXV9 152 aa13.41□□□□□ -0.26
LTBP3-210ENST00000528516 SPANXA1Q9NS26 97 aa13.41□□□□□ -0.26
LTBP3-210ENST00000528516 SPENQ96T58 3664 aaKnown RBP13.41□□□□□ -0.26
LTBP3-210ENST00000528516 LGALS9O00182 355 aa13.41□□□□□ -0.26
LTBP3-210ENST00000528516 TRIAP1O43715 76 aa13.41□□□□□ -0.26
LTBP3-210ENST00000528516 PRR9Q5T870 116 aa13.41□□□□□ -0.26
LTBP3-210ENST00000528516 HIST2H2BCQ6DN03 193 aa13.41□□□□□ -0.26
LTBP3-210ENST00000528516 MGAM2Q2M2H8 2515 aa13.41□□□□□ -0.26
LTBP3-210ENST00000528516 NXPH4O95158 308 aa13.4□□□□□ -0.26
LTBP3-210ENST00000528516 IGLV4-69A0A075B6H9 119 aa13.4□□□□□ -0.26
LTBP3-210ENST00000528516 ODF3BA8MYP8 253 aa13.4□□□□□ -0.26
LTBP3-210ENST00000528516 INSP01308 110 aa13.4□□□□□ -0.26
LTBP3-210ENST00000528516 CRYGDP07320 174 aa13.4□□□□□ -0.26
LTBP3-210ENST00000528516 Q6Q795 121 aa13.39□□□□□ -0.27
LTBP3-210ENST00000528516 C10orf105Q8TEF2 133 aa13.39□□□□□ -0.27
LTBP3-210ENST00000528516 VPREB3Q9UKI3 123 aa13.39□□□□□ -0.27
LTBP3-210ENST00000528516 TMEM263Q8WUH6 116 aaKnown RBP13.39□□□□□ -0.27
LTBP3-210ENST00000528516 TMEM141Q96I45 108 aa13.39□□□□□ -0.27
LTBP3-210ENST00000528516 TMEM126AQ9H061 195 aa13.39□□□□□ -0.27
LTBP3-210ENST00000528516 U3KQE9 123 aa13.39□□□□□ -0.27
LTBP3-210ENST00000528516 C6orf226Q5I0X4 101 aa13.37□□□□□ -0.27
LTBP3-210ENST00000528516 C9orf47Q6ZRZ4 202 aa13.37□□□□□ -0.27
LTBP3-210ENST00000528516 ZFAND3Q9H8U3 227 aa13.37□□□□□ -0.27
LTBP3-210ENST00000528516 NOP10Q9NPE3 64 aaKnown RBP13.37□□□□□ -0.27
LTBP3-210ENST00000528516 PSMG3-AS1Q96PY0 264 aa13.37□□□□□ -0.27
LTBP3-210ENST00000528516 ICOSQ9Y6W8 199 aa13.37□□□□□ -0.27
LTBP3-210ENST00000528516 PROK1P58294 105 aa13.36□□□□□ -0.27
LTBP3-210ENST00000528516 MRPL53Q96EL3 112 aaKnown RBP13.36□□□□□ -0.27
LTBP3-210ENST00000528516 TMEM61Q8N0U2 210 aa13.36□□□□□ -0.27
LTBP3-210ENST00000528516 A0A0B4J2C4 111 aa13.36□□□□□ -0.27
LTBP3-210ENST00000528516 LINC00694P0DN24 101 aa13.35□□□□□ -0.27
LTBP3-210ENST00000528516 EDA2RQ9HAV5 297 aa13.35□□□□□ -0.27
LTBP3-210ENST00000528516 LEPROTO15243 131 aa13.35□□□□□ -0.27
LTBP3-210ENST00000528516 BRI3O95415 125 aa13.35□□□□□ -0.27
LTBP3-210ENST00000528516 TSHBP01222 138 aa13.35□□□□□ -0.27
LTBP3-210ENST00000528516 FBXL19-AS1Q494R0 122 aa13.35□□□□□ -0.27
LTBP3-210ENST00000528516 MALP21145 153 aa13.34□□□□□ -0.27
LTBP3-210ENST00000528516 IGHV4-4A0A075B6R2 117 aa13.34□□□□□ -0.27
LTBP3-210ENST00000528516 ZNF22P17026 224 aaPredicted RBP13.34□□□□□ -0.27
LTBP3-210ENST00000528516 IGHG2P01859 326 aa13.33□□□□□ -0.28
LTBP3-210ENST00000528516 Q6ZSV7 163 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms