RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 SULT1A2P50226 295 aa14.35□□□□□ -0.11
TRAPPC4-208ENST00000527680 TWIST1Q15672 202 aa14.35□□□□□ -0.11
TRAPPC4-208ENST00000527680 PGLYRP4Q96LB8 373 aa14.35□□□□□ -0.11
TRAPPC4-208ENST00000527680 CNBPP62633 177 aaKnown RBP14.34□□□□□ -0.11
TRAPPC4-208ENST00000527680 WDR73Q6P4I2 378 aa14.34□□□□□ -0.11
TRAPPC4-208ENST00000527680 C9orf62Q8N4C0 152 aa14.34□□□□□ -0.11
TRAPPC4-208ENST00000527680 NUDT10Q8NFP7 164 aa14.34□□□□□ -0.11
TRAPPC4-208ENST00000527680 NUDT11Q96G61 164 aa14.34□□□□□ -0.11
TRAPPC4-208ENST00000527680 GFRA4Q9GZZ7 299 aa14.34□□□□□ -0.11
TRAPPC4-208ENST00000527680 IGHV3-64A0A075B6Q5 118 aa14.33□□□□□ -0.12
TRAPPC4-208ENST00000527680 TRBV20OR9-2A0A075B6H5 130 aa14.32□□□□□ -0.12
TRAPPC4-208ENST00000527680 IGKV3OR2-268A0A0C4DH90 116 aa14.32□□□□□ -0.12
TRAPPC4-208ENST00000527680 HNRNPA3P51991 378 aaKnown RBP14.32□□□□□ -0.12
TRAPPC4-208ENST00000527680 BCL2P10415 239 aa14.31□□□□□ -0.12
TRAPPC4-208ENST00000527680 PLA2G2DQ9UNK4 145 aa14.3□□□□□ -0.12
TRAPPC4-208ENST00000527680 CFAP161Q6P656 301 aa14.29□□□□□ -0.12
TRAPPC4-208ENST00000527680 TRAV26-2A0A0B4J265 109 aa14.28□□□□□ -0.12
TRAPPC4-208ENST00000527680 GAGE12HA6NDE8 117 aa14.28□□□□□ -0.12
TRAPPC4-208ENST00000527680 SLPIP03973 132 aa14.28□□□□□ -0.12
TRAPPC4-208ENST00000527680 CTRLP40313 264 aa14.28□□□□□ -0.12
TRAPPC4-208ENST00000527680 AMMECR1LQ6DCA0 310 aa14.28□□□□□ -0.12
TRAPPC4-208ENST00000527680 SMIM15Q7Z3B0 74 aa14.28□□□□□ -0.12
TRAPPC4-208ENST00000527680 GATD1Q8NB37 220 aa14.28□□□□□ -0.12
TRAPPC4-208ENST00000527680 RNASE7Q9H1E1 156 aaKnown RBP14.28□□□□□ -0.12
TRAPPC4-208ENST00000527680 RPP21Q9H633 154 aaKnown RBP14.28□□□□□ -0.12
TRAPPC4-208ENST00000527680 CHTF8P0CG12 524 aa14.27□□□□□ -0.13
TRAPPC4-208ENST00000527680 TAGLN2P37802 199 aaKnown RBP14.27□□□□□ -0.13
TRAPPC4-208ENST00000527680 OCC1Q8TAD7 63 aa14.27□□□□□ -0.13
TRAPPC4-208ENST00000527680 FAT3Q8TDW7 4589 aa14.26□□□□□ -0.13
TRAPPC4-208ENST00000527680 A0A087WYN8 130 aa14.26□□□□□ -0.13
TRAPPC4-208ENST00000527680 CIRBPQ14011 172 aaKnown RBP14.26□□□□□ -0.13
TRAPPC4-208ENST00000527680 RNASEKQ6P5S7 137 aaKnown RBP14.26□□□□□ -0.13
TRAPPC4-208ENST00000527680 SLC51BQ86UW2 128 aa14.26□□□□□ -0.13
TRAPPC4-208ENST00000527680 RNF185Q96GF1 192 aa14.25□□□□□ -0.13
TRAPPC4-208ENST00000527680 RPL39LQ96EH5 51 aaKnown RBP14.24□□□□□ -0.13
TRAPPC4-208ENST00000527680 CNFNQ9BYD5 112 aa14.24□□□□□ -0.13
TRAPPC4-208ENST00000527680 K7EN84 100 aa14.23□□□□□ -0.13
TRAPPC4-208ENST00000527680 HIGD2BQ4VC39 106 aa14.23□□□□□ -0.13
TRAPPC4-208ENST00000527680 Q6ZRU5 148 aa14.23□□□□□ -0.13
TRAPPC4-208ENST00000527680 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.22□□□□□ -0.13
TRAPPC4-208ENST00000527680 IGKV2-29A2NJV5 120 aaPredicted RBP14.22□□□□□ -0.13
TRAPPC4-208ENST00000527680 NCR2O95944 276 aa14.22□□□□□ -0.13
TRAPPC4-208ENST00000527680 RPS10P46783 165 aaKnown RBP14.22□□□□□ -0.13
TRAPPC4-208ENST00000527680 FOXA3P55318 350 aaPredicted RBP14.22□□□□□ -0.13
TRAPPC4-208ENST00000527680 COX6A2Q02221 97 aa14.22□□□□□ -0.13
TRAPPC4-208ENST00000527680 Q6ZNX1 250 aa14.22□□□□□ -0.13
TRAPPC4-208ENST00000527680 CHCHD10Q8WYQ3 142 aaPredicted RBP14.22□□□□□ -0.13
TRAPPC4-208ENST00000527680 PKHD1L1Q86WI1 4243 aa14.22□□□□□ -0.13
TRAPPC4-208ENST00000527680 APCSP02743 223 aa14.21□□□□□ -0.13
TRAPPC4-208ENST00000527680 TEX261Q6UWH6 196 aa14.21□□□□□ -0.13
TRAPPC4-208ENST00000527680 C15orf56Q8N910 161 aa14.21□□□□□ -0.13
TRAPPC4-208ENST00000527680 SPACA4Q8TDM5 124 aa14.21□□□□□ -0.13
TRAPPC4-208ENST00000527680 GATCO43716 136 aaKnown RBP14.2□□□□□ -0.14
TRAPPC4-208ENST00000527680 PMCHP20382 165 aa14.2□□□□□ -0.14
TRAPPC4-208ENST00000527680 TCTE3Q8IZS6 198 aa14.2□□□□□ -0.14
TRAPPC4-208ENST00000527680 C7orf33Q8WU49 177 aa14.2□□□□□ -0.14
TRAPPC4-208ENST00000527680 GTSF1Q8WW33 167 aa14.2□□□□□ -0.14
TRAPPC4-208ENST00000527680 SDHAF1A6NFY7 115 aa14.19□□□□□ -0.14
TRAPPC4-208ENST00000527680 H7C423 109 aa14.19□□□□□ -0.14
TRAPPC4-208ENST00000527680 FGF6P10767 208 aa14.19□□□□□ -0.14
TRAPPC4-208ENST00000527680 MAJINQ3KP22 176 aa14.19□□□□□ -0.14
TRAPPC4-208ENST00000527680 IGKV2-24A0A0C4DH68 120 aa14.18□□□□□ -0.14
TRAPPC4-208ENST00000527680 BTF3L4Q96K17 158 aa14.18□□□□□ -0.14
TRAPPC4-208ENST00000527680 PLAC8Q9NZF1 115 aa14.18□□□□□ -0.14
TRAPPC4-208ENST00000527680 A8MWL6 223 aa14.17□□□□□ -0.14
TRAPPC4-208ENST00000527680 NDUFS6O75380 124 aaKnown RBP14.17□□□□□ -0.14
TRAPPC4-208ENST00000527680 CEBPGP53567 150 aa14.17□□□□□ -0.14
TRAPPC4-208ENST00000527680 PRSS3P2Q8NHM4 247 aa14.17□□□□□ -0.14
TRAPPC4-208ENST00000527680 TMEM101Q96IK0 257 aa14.17□□□□□ -0.14
TRAPPC4-208ENST00000527680 I3L3M4 83 aa14.16□□□□□ -0.14
TRAPPC4-208ENST00000527680 PHOX2AO14813 284 aa14.16□□□□□ -0.14
TRAPPC4-208ENST00000527680 BORCS7Q96B45 105 aa14.16□□□□□ -0.14
TRAPPC4-208ENST00000527680 XCL1P47992 114 aa14.14□□□□□ -0.15
TRAPPC4-208ENST00000527680 BLOC1S1P78537 153 aa14.14□□□□□ -0.15
TRAPPC4-208ENST00000527680 OR5A1Q8NGJ0 315 aa14.14□□□□□ -0.15
TRAPPC4-208ENST00000527680 LYPD6BQ8NI32 183 aa14.14□□□□□ -0.15
TRAPPC4-208ENST00000527680 TMEM250H0YL14 139 aa14.13□□□□□ -0.15
TRAPPC4-208ENST00000527680 MT1HL1P0DM35 61 aa14.13□□□□□ -0.15
TRAPPC4-208ENST00000527680 ZNF25P17030 456 aaPredicted RBP14.13□□□□□ -0.15
TRAPPC4-208ENST00000527680 STPG4Q8N801 248 aa14.13□□□□□ -0.15
TRAPPC4-208ENST00000527680 ST20Q9HBF5 79 aa14.13□□□□□ -0.15
TRAPPC4-208ENST00000527680 HMCN2Q8NDA2 5059 aa14.12□□□□□ -0.15
TRAPPC4-208ENST00000527680 GVQW2A0A096LPI5 108 aaPredicted RBP14.12□□□□□ -0.15
TRAPPC4-208ENST00000527680 FOXI1Q12951 378 aa14.12□□□□□ -0.15
TRAPPC4-208ENST00000527680 FAM231DQ6ZW35 169 aa14.12□□□□□ -0.15
TRAPPC4-208ENST00000527680 FAM231BA6NCW3 169 aa14.11□□□□□ -0.15
TRAPPC4-208ENST00000527680 ALKAL2Q6UX46 152 aa14.11□□□□□ -0.15
TRAPPC4-208ENST00000527680 TRBV6-5A0A0K0K1A5 114 aa14.1□□□□□ -0.15
TRAPPC4-208ENST00000527680 CCL25O15444 150 aa14.1□□□□□ -0.15
TRAPPC4-208ENST00000527680 LINC00959A0A1B0GUT2 108 aa14.09□□□□□ -0.15
TRAPPC4-208ENST00000527680 SS18Q15532 418 aa14.09□□□□□ -0.15
TRAPPC4-208ENST00000527680 MRAP2Q96G30 205 aa14.09□□□□□ -0.15
TRAPPC4-208ENST00000527680 TMEM242Q9NWH2 141 aa14.09□□□□□ -0.15
TRAPPC4-208ENST00000527680 IGHV1-58A0A0C4DH39 117 aa14.08□□□□□ -0.16
TRAPPC4-208ENST00000527680 GAS8-AS1O95177 125 aa14.08□□□□□ -0.16
TRAPPC4-208ENST00000527680 CT83Q5H943 113 aa14.08□□□□□ -0.16
TRAPPC4-208ENST00000527680 LINC00526Q96FQ7 95 aa14.08□□□□□ -0.16
TRAPPC4-208ENST00000527680 EIF5A2Q9GZV4 153 aaKnown RBP14.08□□□□□ -0.16
TRAPPC4-208ENST00000527680 A0A096LNI7 61 aa14.07□□□□□ -0.16
TRAPPC4-208ENST00000527680 A0A1B0GUT8 65 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms