RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 TIMM8BQ9Y5J9 83 aaPredicted RBP1.75□□□□□ -2.13
CSDE1-211ENST00000525970 DIDO1Q9BTC0 2240 aaKnown RBP1.75□□□□□ -2.13
CSDE1-211ENST00000525970 MGAMO43451 1857 aa1.75□□□□□ -2.13
CSDE1-211ENST00000525970 PLXNA1Q9UIW2 1896 aa1.75□□□□□ -2.13
CSDE1-211ENST00000525970 TNRC6BQ9UPQ9 1833 aaKnown RBP1.75□□□□□ -2.13
CSDE1-211ENST00000525970 PIGBOS1A0A0B4J2F0 54 aa1.74□□□□□ -2.13
CSDE1-211ENST00000525970 UBE2L5PA0A1B0GUS4 154 aa1.74□□□□□ -2.13
CSDE1-211ENST00000525970 A0A1B0GWA3 101 aa1.74□□□□□ -2.13
CSDE1-211ENST00000525970 J3KT08 172 aa1.74□□□□□ -2.13
CSDE1-211ENST00000525970 J3QKU1 62 aa1.74□□□□□ -2.13
CSDE1-211ENST00000525970 M0R2Z0 102 aa1.74□□□□□ -2.13
CSDE1-211ENST00000525970 CORTO00230 105 aa1.74□□□□□ -2.13
CSDE1-211ENST00000525970 FABP2P12104 132 aa1.74□□□□□ -2.13
CSDE1-211ENST00000525970 HIST1H1DP16402 221 aaKnown RBP1.74□□□□□ -2.13
CSDE1-211ENST00000525970 CMPK1P30085 196 aa1.74□□□□□ -2.13
CSDE1-211ENST00000525970 RPS27P42677 84 aaKnown RBP1.74□□□□□ -2.13
CSDE1-211ENST00000525970 SPINT3P49223 89 aa1.74□□□□□ -2.13
CSDE1-211ENST00000525970 MORN2Q502X0 79 aa1.74□□□□□ -2.13
CSDE1-211ENST00000525970 Q56UQ5 140 aa1.74□□□□□ -2.13
CSDE1-211ENST00000525970 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.74□□□□□ -2.13
CSDE1-211ENST00000525970 CYP2G1PQ6ZSU1 146 aa1.74□□□□□ -2.13
CSDE1-211ENST00000525970 OR5D14Q8NGL3 314 aa1.74□□□□□ -2.13
CSDE1-211ENST00000525970 OR10AC1Q8NH08 325 aa1.74□□□□□ -2.13
CSDE1-211ENST00000525970 TMEM254Q8TBM7 123 aa1.74□□□□□ -2.13
CSDE1-211ENST00000525970 PSMG3Q9BT73 122 aaPredicted RBP1.74□□□□□ -2.13
CSDE1-211ENST00000525970 TMEM191AQ9H0A3 160 aa1.74□□□□□ -2.13
CSDE1-211ENST00000525970 R4GMQ9 66 aa1.74□□□□□ -2.13
CSDE1-211ENST00000525970 UBR3Q6ZT12 1888 aa1.73□□□□□ -2.13
CSDE1-211ENST00000525970 EXPH5Q8NEV8 1989 aa1.73□□□□□ -2.13
CSDE1-211ENST00000525970 TRAV36DV7A0A075B6V5 113 aa1.73□□□□□ -2.13
CSDE1-211ENST00000525970 A0A0G2JMM0 328 aa1.73□□□□□ -2.13
CSDE1-211ENST00000525970 LOC107984640A0A0U1RRK4 108 aa1.73□□□□□ -2.13
CSDE1-211ENST00000525970 C3orf85A0A1B0GTC6 90 aa1.73□□□□□ -2.13
CSDE1-211ENST00000525970 A0A1W2PPB8 328 aa1.73□□□□□ -2.13
CSDE1-211ENST00000525970 TCRBV4S1A1TA0A5B7 111 aa1.73□□□□□ -2.13
CSDE1-211ENST00000525970 IGLC7A0M8Q6 106 aa1.73□□□□□ -2.13
CSDE1-211ENST00000525970 OR2T8A6NH00 312 aa1.73□□□□□ -2.13
CSDE1-211ENST00000525970 CRYM-AS1A6NIL9 109 aa1.73□□□□□ -2.13
CSDE1-211ENST00000525970 KIR3DP1A8MWS1 328 aa1.73□□□□□ -2.13
CSDE1-211ENST00000525970 H3BUT2 72 aa1.73□□□□□ -2.13
CSDE1-211ENST00000525970 SPINK4O60575 86 aa1.73□□□□□ -2.13
CSDE1-211ENST00000525970 MT-ND6P03923 174 aa1.73□□□□□ -2.13
CSDE1-211ENST00000525970 IGLC2P0DOY2 106 aa1.73□□□□□ -2.13
CSDE1-211ENST00000525970 IGLC3P0DOY3 106 aa1.73□□□□□ -2.13
CSDE1-211ENST00000525970 IAPPP10997 89 aa1.73□□□□□ -2.13
CSDE1-211ENST00000525970 IL9P15248 144 aa1.73□□□□□ -2.13
CSDE1-211ENST00000525970 CBLN1P23435 193 aa1.73□□□□□ -2.13
CSDE1-211ENST00000525970 UBE2G1P62253 170 aa1.73□□□□□ -2.13
CSDE1-211ENST00000525970 HIST1H1AQ02539 215 aaPredicted RBP1.73□□□□□ -2.13
CSDE1-211ENST00000525970 OR8B8Q15620 311 aa1.73□□□□□ -2.13
CSDE1-211ENST00000525970 SLC48A1Q6P1K1 146 aa1.73□□□□□ -2.13
CSDE1-211ENST00000525970 ZNF833PQ6ZTB9 187 aa1.73□□□□□ -2.13
CSDE1-211ENST00000525970 FAM216BQ8N7L0 139 aa1.73□□□□□ -2.13
CSDE1-211ENST00000525970 C5orf17Q8NAS9 161 aa1.73□□□□□ -2.13
CSDE1-211ENST00000525970 OR10AG1Q8NH19 301 aa1.73□□□□□ -2.13
CSDE1-211ENST00000525970 CCL4L1Q8NHW4 92 aa1.73□□□□□ -2.13
CSDE1-211ENST00000525970 OTOSQ8NHW6 89 aa1.73□□□□□ -2.13
CSDE1-211ENST00000525970 RAB37Q96AX2 223 aa1.73□□□□□ -2.13
CSDE1-211ENST00000525970 ARHGAP5-AS1Q96IT6 56 aa1.73□□□□□ -2.13
CSDE1-211ENST00000525970 SDF2Q99470 211 aa1.73□□□□□ -2.13
CSDE1-211ENST00000525970 PMCHL2Q9BQD1 86 aa1.73□□□□□ -2.13
CSDE1-211ENST00000525970 ST20Q9HBF5 79 aa1.73□□□□□ -2.13
CSDE1-211ENST00000525970 PSENENQ9NZ42 101 aa1.73□□□□□ -2.13
CSDE1-211ENST00000525970 HSPB8Q9UJY1 196 aa1.73□□□□□ -2.13
CSDE1-211ENST00000525970 SPCS1Q9Y6A9 102 aa1.73□□□□□ -2.13
CSDE1-211ENST00000525970 TNS1Q9HBL0 1735 aaKnown RBP1.73□□□□□ -2.13
CSDE1-211ENST00000525970 SORL1Q92673 2214 aa1.72□□□□□ -2.13
CSDE1-211ENST00000525970 CTXND1A0A1B0GTU2 59 aa1.72□□□□□ -2.13
CSDE1-211ENST00000525970 K7EP34 96 aa1.72□□□□□ -2.13
CSDE1-211ENST00000525970 DEGS1O15121 323 aa1.72□□□□□ -2.13
CSDE1-211ENST00000525970 C3orf79P0CE67 100 aa1.72□□□□□ -2.13
CSDE1-211ENST00000525970 SLC25A6P12236 298 aa1.72□□□□□ -2.13
CSDE1-211ENST00000525970 GNG4P50150 75 aa1.72□□□□□ -2.13
CSDE1-211ENST00000525970 SEC11AP67812 179 aa1.72□□□□□ -2.13
CSDE1-211ENST00000525970 SERF2P84101 59 aa1.72□□□□□ -2.13
CSDE1-211ENST00000525970 HSD52Q0P140 79 aa1.72□□□□□ -2.13
CSDE1-211ENST00000525970 TDRG1Q3Y452 100 aa1.72□□□□□ -2.13
CSDE1-211ENST00000525970 Q5XG85 94 aa1.72□□□□□ -2.13
CSDE1-211ENST00000525970 MRPL54Q6P161 138 aaKnown RBP1.72□□□□□ -2.13
CSDE1-211ENST00000525970 TMEM14EPQ6UXP3 125 aa1.72□□□□□ -2.13
CSDE1-211ENST00000525970 UNQ6190/PRO20217Q6UXQ8 127 aa1.72□□□□□ -2.13
CSDE1-211ENST00000525970 LINC00305Q7Z4B0 112 aa1.72□□□□□ -2.13
CSDE1-211ENST00000525970 NAA38Q9BRA0 125 aaKnown RBP1.72□□□□□ -2.13
CSDE1-211ENST00000525970 HILPDAQ9Y5L2 63 aa1.72□□□□□ -2.13
CSDE1-211ENST00000525970 PLXNB2O15031 1838 aa1.72□□□□□ -2.13
CSDE1-211ENST00000525970 INTS1Q8N201 2190 aaKnown RBP1.72□□□□□ -2.13
CSDE1-211ENST00000525970 KIAA1549Q9HCM3 1950 aa1.72□□□□□ -2.13
CSDE1-211ENST00000525970 HELZP42694 1942 aaKnown RBP1.72□□□□□ -2.13
CSDE1-211ENST00000525970 NINQ8N4C6 2090 aa1.71□□□□□ -2.13
CSDE1-211ENST00000525970 TRBV6-8A0A0A6YYG3 113 aa1.71□□□□□ -2.14
CSDE1-211ENST00000525970 TRBV27A0A0K0K1C4 114 aa1.71□□□□□ -2.14
CSDE1-211ENST00000525970 TMEM14DPA8MWL7 114 aa1.71□□□□□ -2.14
CSDE1-211ENST00000525970 H3BRM9 83 aa1.71□□□□□ -2.14
CSDE1-211ENST00000525970 NUPR1O60356 82 aa1.71□□□□□ -2.14
CSDE1-211ENST00000525970 SPINK8P0C7L1 97 aa1.71□□□□□ -2.14
CSDE1-211ENST00000525970 IGLC1P0CG04 106 aa1.71□□□□□ -2.14
CSDE1-211ENST00000525970 SMIM13P0DJ93 91 aa1.71□□□□□ -2.14
CSDE1-211ENST00000525970 CD52P31358 61 aa1.71□□□□□ -2.14
CSDE1-211ENST00000525970 Q0VG73 95 aa1.71□□□□□ -2.14
CSDE1-211ENST00000525970 VMA21Q3ZAQ7 101 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms