RNA–Protein interactions for RNA: ENST00000524277.1

SPARC-206, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 505 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-206ENST00000524277 COTL1Q14019 142 aa7.6□□□□□ -1.19
SPARC-206ENST00000524277 LYZL1Q6UWQ5 148 aa7.6□□□□□ -1.19
SPARC-206ENST00000524277 C9orf62Q8N4C0 152 aa7.6□□□□□ -1.19
SPARC-206ENST00000524277 IGLV10-54A0A075B6I4 117 aa7.59□□□□□ -1.19
SPARC-206ENST00000524277 SULT1A2P50226 295 aa7.59□□□□□ -1.19
SPARC-206ENST00000524277 Q6ZRU5 148 aa7.59□□□□□ -1.19
SPARC-206ENST00000524277 DPH3Q96FX2 82 aa7.59□□□□□ -1.19
SPARC-206ENST00000524277 MED9Q9NWA0 146 aa7.59□□□□□ -1.19
SPARC-206ENST00000524277 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.59□□□□□ -1.19
SPARC-206ENST00000524277 IGLV4-60A0A075B6I1 120 aa7.58□□□□□ -1.2
SPARC-206ENST00000524277 RAB19A4D1S5 217 aa7.58□□□□□ -1.2
SPARC-206ENST00000524277 TEX261Q6UWH6 196 aa7.58□□□□□ -1.2
SPARC-206ENST00000524277 CNFNQ9BYD5 112 aa7.58□□□□□ -1.2
SPARC-206ENST00000524277 PLA2G2DQ9UNK4 145 aa7.58□□□□□ -1.2
SPARC-206ENST00000524277 H7C423 109 aa7.57□□□□□ -1.2
SPARC-206ENST00000524277 NCR2O95944 276 aa7.57□□□□□ -1.2
SPARC-206ENST00000524277 CTRLP40313 264 aa7.57□□□□□ -1.2
SPARC-206ENST00000524277 AMTP48728 403 aa7.57□□□□□ -1.2
SPARC-206ENST00000524277 SMIM15Q7Z3B0 74 aa7.57□□□□□ -1.2
SPARC-206ENST00000524277 HMCN2Q8NDA2 5059 aa7.57□□□□□ -1.2
SPARC-206ENST00000524277 BCL2P10415 239 aa7.56□□□□□ -1.2
SPARC-206ENST00000524277 TWIST1Q15672 202 aa7.56□□□□□ -1.2
SPARC-206ENST00000524277 NUDT10Q8NFP7 164 aa7.56□□□□□ -1.2
SPARC-206ENST00000524277 NUDT11Q96G61 164 aa7.56□□□□□ -1.2
SPARC-206ENST00000524277 FAM210AQ96ND0 272 aa7.56□□□□□ -1.2
SPARC-206ENST00000524277 TRBV20OR9-2A0A075B6H5 130 aa7.55□□□□□ -1.2
SPARC-206ENST00000524277 GFRA4Q9GZZ7 299 aa7.55□□□□□ -1.2
SPARC-206ENST00000524277 RPP21Q9H633 154 aaKnown RBP7.55□□□□□ -1.2
SPARC-206ENST00000524277 PKIGQ9Y2B9 76 aa7.55□□□□□ -1.2
SPARC-206ENST00000524277 A0A087WYN8 130 aa7.54□□□□□ -1.2
SPARC-206ENST00000524277 PANO1I0J062 215 aa7.54□□□□□ -1.2
SPARC-206ENST00000524277 SLPIP03973 132 aa7.54□□□□□ -1.2
SPARC-206ENST00000524277 RPS10P46783 165 aaKnown RBP7.54□□□□□ -1.2
SPARC-206ENST00000524277 HNRNPA3P51991 378 aaKnown RBP7.54□□□□□ -1.2
SPARC-206ENST00000524277 AMMECR1LQ6DCA0 310 aa7.54□□□□□ -1.2
SPARC-206ENST00000524277 SLC51BQ86UW2 128 aa7.54□□□□□ -1.2
SPARC-206ENST00000524277 SPACA4Q8TDM5 124 aa7.54□□□□□ -1.2
SPARC-206ENST00000524277 C7orf33Q8WU49 177 aa7.54□□□□□ -1.2
SPARC-206ENST00000524277 PLAC8Q9NZF1 115 aa7.54□□□□□ -1.2
SPARC-206ENST00000524277 GAGE12HA6NDE8 117 aa7.53□□□□□ -1.2
SPARC-206ENST00000524277 NDUFS6O75380 124 aaKnown RBP7.53□□□□□ -1.2
SPARC-206ENST00000524277 GATD1Q8NB37 220 aa7.53□□□□□ -1.2
SPARC-206ENST00000524277 APCSP02743 223 aa7.52□□□□□ -1.21
SPARC-206ENST00000524277 ZNF25P17030 456 aaPredicted RBP7.52□□□□□ -1.21
SPARC-206ENST00000524277 TCTE3Q8IZS6 198 aa7.52□□□□□ -1.21
SPARC-206ENST00000524277 OCC1Q8TAD7 63 aa7.52□□□□□ -1.21
SPARC-206ENST00000524277 A8MWL6 223 aa7.51□□□□□ -1.21
SPARC-206ENST00000524277 TMEM250H0YL14 139 aa7.51□□□□□ -1.21
SPARC-206ENST00000524277 RNASEKQ6P5S7 137 aaKnown RBP7.51□□□□□ -1.21
SPARC-206ENST00000524277 C15orf56Q8N910 161 aa7.51□□□□□ -1.21
SPARC-206ENST00000524277 CHCHD10Q8WYQ3 142 aaPredicted RBP7.51□□□□□ -1.21
SPARC-206ENST00000524277 BTF3L4Q96K17 158 aa7.51□□□□□ -1.21
SPARC-206ENST00000524277 RNASE7Q9H1E1 156 aaKnown RBP7.51□□□□□ -1.21
SPARC-206ENST00000524277 LINC00474Q9P2X8 69 aa7.51□□□□□ -1.21
SPARC-206ENST00000524277 GVQW2A0A096LPI5 108 aaPredicted RBP7.5□□□□□ -1.21
SPARC-206ENST00000524277 SDHAF1A6NFY7 115 aa7.5□□□□□ -1.21
SPARC-206ENST00000524277 I3L3M4 83 aa7.5□□□□□ -1.21
SPARC-206ENST00000524277 FGF6P10767 208 aa7.5□□□□□ -1.21
SPARC-206ENST00000524277 COX6A2Q02221 97 aa7.5□□□□□ -1.21
SPARC-206ENST00000524277 FAM231DQ6ZW35 169 aa7.5□□□□□ -1.21
SPARC-206ENST00000524277 TMEM101Q96IK0 257 aa7.5□□□□□ -1.21
SPARC-206ENST00000524277 TRAV26-2A0A0B4J265 109 aa7.49□□□□□ -1.21
SPARC-206ENST00000524277 IGKV3OR2-268A0A0C4DH90 116 aa7.49□□□□□ -1.21
SPARC-206ENST00000524277 TRBV6-5A0A0K0K1A5 114 aa7.49□□□□□ -1.21
SPARC-206ENST00000524277 K7EN84 100 aa7.49□□□□□ -1.21
SPARC-206ENST00000524277 GATCO43716 136 aaKnown RBP7.49□□□□□ -1.21
SPARC-206ENST00000524277 CHTF8P0CG12 524 aa7.49□□□□□ -1.21
SPARC-206ENST00000524277 MT1HL1P0DM35 61 aa7.49□□□□□ -1.21
SPARC-206ENST00000524277 PMCHP20382 165 aa7.49□□□□□ -1.21
SPARC-206ENST00000524277 FOXA3P55318 350 aaPredicted RBP7.49□□□□□ -1.21
SPARC-206ENST00000524277 BLOC1S1P78537 153 aa7.49□□□□□ -1.21
SPARC-206ENST00000524277 CT83Q5H943 113 aa7.49□□□□□ -1.21
SPARC-206ENST00000524277 Q6ZNX1 250 aa7.49□□□□□ -1.21
SPARC-206ENST00000524277 OR5A1Q8NGJ0 315 aa7.49□□□□□ -1.21
SPARC-206ENST00000524277 GTSF1Q8WW33 167 aa7.49□□□□□ -1.21
SPARC-206ENST00000524277 BORCS7Q96B45 105 aa7.49□□□□□ -1.21
SPARC-206ENST00000524277 MAJINQ3KP22 176 aa7.48□□□□□ -1.21
SPARC-206ENST00000524277 RPL39LQ96EH5 51 aaKnown RBP7.48□□□□□ -1.21
SPARC-206ENST00000524277 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.47□□□□□ -1.21
SPARC-206ENST00000524277 IGHV1-58A0A0C4DH39 117 aa7.47□□□□□ -1.21
SPARC-206ENST00000524277 IGKV2-29A2NJV5 120 aaPredicted RBP7.47□□□□□ -1.21
SPARC-206ENST00000524277 PHOX2AO14813 284 aa7.47□□□□□ -1.21
SPARC-206ENST00000524277 FOXI1Q12951 378 aa7.47□□□□□ -1.21
SPARC-206ENST00000524277 HIGD2BQ4VC39 106 aa7.47□□□□□ -1.21
SPARC-206ENST00000524277 PRSS3P2Q8NHM4 247 aa7.47□□□□□ -1.21
SPARC-206ENST00000524277 ST20Q9HBF5 79 aa7.47□□□□□ -1.21
SPARC-206ENST00000524277 UBR4Q5T4S7 5183 aa7.46□□□□□ -1.22
SPARC-206ENST00000524277 FAM231BA6NCW3 169 aa7.46□□□□□ -1.22
SPARC-206ENST00000524277 CCL25O15444 150 aa7.46□□□□□ -1.22
SPARC-206ENST00000524277 ESDP10768 282 aa7.46□□□□□ -1.22
SPARC-206ENST00000524277 SMAGPQ0VAQ4 97 aa7.46□□□□□ -1.22
SPARC-206ENST00000524277 SS18Q15532 418 aa7.46□□□□□ -1.22
SPARC-206ENST00000524277 STPG4Q8N801 248 aa7.46□□□□□ -1.22
SPARC-206ENST00000524277 MRAP2Q96G30 205 aa7.46□□□□□ -1.22
SPARC-206ENST00000524277 TMEM191AQ9H0A3 160 aa7.46□□□□□ -1.22
SPARC-206ENST00000524277 IGKV2-24A0A0C4DH68 120 aa7.45□□□□□ -1.22
SPARC-206ENST00000524277 LINC00959A0A1B0GUT2 108 aa7.45□□□□□ -1.22
SPARC-206ENST00000524277 A0A1B0GUT8 65 aa7.45□□□□□ -1.22
SPARC-206ENST00000524277 PPP1R17O96001 155 aa7.45□□□□□ -1.22
SPARC-206ENST00000524277 CD164L2Q6UWJ8 174 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms