RNA–Protein interactions for RNA: ENST00000523990.1

FBXO28-205, Transcript of F-box protein 28, humanhuman

TSL 2

Gene FBXO28, Length 1,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-205ENST00000523990 V9GYV3 84 aa12.59□□□□□ -0.39
FBXO28-205ENST00000523990 RPL23P62829 140 aaKnown RBP12.58□□□□□ -0.4
FBXO28-205ENST00000523990 TMEM241Q24JQ0 296 aa12.58□□□□□ -0.4
FBXO28-205ENST00000523990 CLPSL2Q6UWE3 100 aa12.58□□□□□ -0.4
FBXO28-205ENST00000523990 DEFB104AQ8WTQ1 72 aa12.58□□□□□ -0.4
FBXO28-205ENST00000523990 BORCS7Q96B45 105 aa12.58□□□□□ -0.4
FBXO28-205ENST00000523990 TMEM70Q9BUB7 260 aa12.58□□□□□ -0.4
FBXO28-205ENST00000523990 A0A1B0GUT8 65 aa12.57□□□□□ -0.4
FBXO28-205ENST00000523990 COTL1Q14019 142 aa12.57□□□□□ -0.4
FBXO28-205ENST00000523990 LINC00269Q8N2A0 174 aa12.57□□□□□ -0.4
FBXO28-205ENST00000523990 SMDT1Q9H4I9 107 aa12.57□□□□□ -0.4
FBXO28-205ENST00000523990 NAT8Q9UHE5 227 aa12.57□□□□□ -0.4
FBXO28-205ENST00000523990 PEA15Q15121 130 aa12.56□□□□□ -0.4
FBXO28-205ENST00000523990 A0A1B0GUV1 79 aa12.55□□□□□ -0.4
FBXO28-205ENST00000523990 AMTP48728 403 aa12.55□□□□□ -0.4
FBXO28-205ENST00000523990 ADIRFQ15847 76 aa12.55□□□□□ -0.4
FBXO28-205ENST00000523990 C20orf203Q8NBC4 194 aa12.55□□□□□ -0.4
FBXO28-205ENST00000523990 TMEM191AQ9H0A3 160 aa12.55□□□□□ -0.4
FBXO28-205ENST00000523990 NUP35Q8NFH5 326 aa12.54□□□□□ -0.4
FBXO28-205ENST00000523990 IGLV4-60A0A075B6I1 120 aa12.54□□□□□ -0.4
FBXO28-205ENST00000523990 SDHAF1A6NFY7 115 aa12.54□□□□□ -0.4
FBXO28-205ENST00000523990 UBE2L6O14933 153 aa12.54□□□□□ -0.4
FBXO28-205ENST00000523990 HLA-DQA1P01909 254 aa12.54□□□□□ -0.4
FBXO28-205ENST00000523990 HAMPP81172 84 aa12.54□□□□□ -0.4
FBXO28-205ENST00000523990 REG3AQ06141 175 aa12.54□□□□□ -0.4
FBXO28-205ENST00000523990 GAS8-AS1O95177 125 aa12.53□□□□□ -0.4
FBXO28-205ENST00000523990 KRTAP26-1Q6PEX3 210 aa12.53□□□□□ -0.4
FBXO28-205ENST00000523990 FAM30AQ9NZY2 134 aa12.53□□□□□ -0.4
FBXO28-205ENST00000523990 TRBV6-5A0A0K0K1A5 114 aa12.52□□□□□ -0.41
FBXO28-205ENST00000523990 NCR2O95944 276 aa12.52□□□□□ -0.41
FBXO28-205ENST00000523990 Q6ZSA8 131 aa12.52□□□□□ -0.41
FBXO28-205ENST00000523990 RNF185Q96GF1 192 aa12.52□□□□□ -0.41
FBXO28-205ENST00000523990 EPM2AB3EWF7 344 aa12.51□□□□□ -0.41
FBXO28-205ENST00000523990 C14orf177Q52M58 125 aa12.51□□□□□ -0.41
FBXO28-205ENST00000523990 NAT8BQ9UHF3 227 aa12.51□□□□□ -0.41
FBXO28-205ENST00000523990 SRRM2Q9UQ35 2752 aaKnown RBP12.51□□□□□ -0.41
FBXO28-205ENST00000523990 RAB4AP20338 218 aa12.5□□□□□ -0.41
FBXO28-205ENST00000523990 RIGQ13278 110 aa12.5□□□□□ -0.41
FBXO28-205ENST00000523990 LINC01620Q4KN68 170 aa12.5□□□□□ -0.41
FBXO28-205ENST00000523990 AMN1Q8IY45 258 aa12.5□□□□□ -0.41
FBXO28-205ENST00000523990 IGLV10-54A0A075B6I4 117 aa12.49□□□□□ -0.41
FBXO28-205ENST00000523990 SMIM27A0A1W2PRY6 76 aa12.49□□□□□ -0.41
FBXO28-205ENST00000523990 USP17L23D6RBM5 183 aa12.49□□□□□ -0.41
FBXO28-205ENST00000523990 APCSP02743 223 aa12.49□□□□□ -0.41
FBXO28-205ENST00000523990 MRAP2Q96G30 205 aa12.49□□□□□ -0.41
FBXO28-205ENST00000523990 TRAV8-4A0A0B4J246 113 aa12.48□□□□□ -0.41
FBXO28-205ENST00000523990 I3L3M4 83 aa12.48□□□□□ -0.41
FBXO28-205ENST00000523990 RPS10P46783 165 aaKnown RBP12.48□□□□□ -0.41
FBXO28-205ENST00000523990 Q5VSD8 79 aa12.48□□□□□ -0.41
FBXO28-205ENST00000523990 SMR3BP02814 79 aaPredicted RBP12.47□□□□□ -0.41
FBXO28-205ENST00000523990 ST20Q9HBF5 79 aa12.47□□□□□ -0.41
FBXO28-205ENST00000523990 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.46□□□□□ -0.41
FBXO28-205ENST00000523990 IGKV2-29A2NJV5 120 aaPredicted RBP12.46□□□□□ -0.41
FBXO28-205ENST00000523990 H7C423 109 aa12.45□□□□□ -0.42
FBXO28-205ENST00000523990 TSHBP01222 138 aa12.45□□□□□ -0.42
FBXO28-205ENST00000523990 PMCHP20382 165 aa12.45□□□□□ -0.42
FBXO28-205ENST00000523990 POLR2KP53803 58 aaKnown RBP12.45□□□□□ -0.42
FBXO28-205ENST00000523990 MYCBP2O75592 4640 aa12.45□□□□□ -0.42
FBXO28-205ENST00000523990 SMKR1H3BMG3 65 aa12.45□□□□□ -0.42
FBXO28-205ENST00000523990 PRSS1P07477 247 aa12.45□□□□□ -0.42
FBXO28-205ENST00000523990 TMEM242Q9NWH2 141 aa12.45□□□□□ -0.42
FBXO28-205ENST00000523990 TRBV27A0A0K0K1C4 114 aa12.44□□□□□ -0.42
FBXO28-205ENST00000523990 FGF6P10767 208 aa12.44□□□□□ -0.42
FBXO28-205ENST00000523990 AMMECR1LQ6DCA0 310 aa12.44□□□□□ -0.42
FBXO28-205ENST00000523990 ESDP10768 282 aa12.43□□□□□ -0.42
FBXO28-205ENST00000523990 RNASEKQ6P5S7 137 aaKnown RBP12.43□□□□□ -0.42
FBXO28-205ENST00000523990 NRACQ8N912 160 aa12.43□□□□□ -0.42
FBXO28-205ENST00000523990 ZNF25P17030 456 aaPredicted RBP12.42□□□□□ -0.42
FBXO28-205ENST00000523990 CAMPP49913 170 aa12.42□□□□□ -0.42
FBXO28-205ENST00000523990 RAB14P61106 215 aa12.42□□□□□ -0.42
FBXO28-205ENST00000523990 MRPL51Q4U2R6 128 aaKnown RBP12.42□□□□□ -0.42
FBXO28-205ENST00000523990 FAM104BQ5XKR9 115 aa12.42□□□□□ -0.42
FBXO28-205ENST00000523990 A0A1B0GW15 77 aa12.41□□□□□ -0.42
FBXO28-205ENST00000523990 PPP1R17O96001 155 aa12.4□□□□□ -0.42
FBXO28-205ENST00000523990 SUMO2P61956 95 aaKnown RBP12.4□□□□□ -0.42
FBXO28-205ENST00000523990 DGAT2L7PQ6IED9 249 aa12.4□□□□□ -0.42
FBXO28-205ENST00000523990 SCXQ7RTU7 201 aa12.4□□□□□ -0.42
FBXO28-205ENST00000523990 CLRN3Q8NCR9 226 aa12.4□□□□□ -0.42
FBXO28-205ENST00000523990 IGKV3OR2-268A0A0C4DH90 116 aa12.39□□□□□ -0.43
FBXO28-205ENST00000523990 A0A1B0GXF2 115 aa12.39□□□□□ -0.43
FBXO28-205ENST00000523990 FAM229AH3BQW9 127 aa12.39□□□□□ -0.43
FBXO28-205ENST00000523990 IFITM2Q01629 132 aa12.39□□□□□ -0.43
FBXO28-205ENST00000523990 MRPL54Q6P161 138 aaKnown RBP12.39□□□□□ -0.43
FBXO28-205ENST00000523990 C7orf77A4D0Y5 90 aa12.38□□□□□ -0.43
FBXO28-205ENST00000523990 HBBP68871 147 aa12.38□□□□□ -0.43
FBXO28-205ENST00000523990 VCYO14598 125 aa12.37□□□□□ -0.43
FBXO28-205ENST00000523990 CLLU1Q5K131 121 aa12.37□□□□□ -0.43
FBXO28-205ENST00000523990 MRPL52Q86TS9 123 aaKnown RBP12.37□□□□□ -0.43
FBXO28-205ENST00000523990 C9orf163Q8N9P6 203 aa12.37□□□□□ -0.43
FBXO28-205ENST00000523990 BTF3L4Q96K17 158 aa12.37□□□□□ -0.43
FBXO28-205ENST00000523990 CHAC1Q9BUX1 264 aa12.37□□□□□ -0.43
FBXO28-205ENST00000523990 hDV102S1A0JD36 115 aa12.37□□□□□ -0.43
FBXO28-205ENST00000523990 LINC00862A6NCI5 91 aa12.37□□□□□ -0.43
FBXO28-205ENST00000523990 GAGE12HA6NDE8 117 aa12.37□□□□□ -0.43
FBXO28-205ENST00000523990 PPP1R2P9O14990 202 aa12.37□□□□□ -0.43
FBXO28-205ENST00000523990 S100A8P05109 93 aa12.37□□□□□ -0.43
FBXO28-205ENST00000523990 CNBPP62633 177 aaKnown RBP12.37□□□□□ -0.43
FBXO28-205ENST00000523990 PNRC1Q12796 327 aaPredicted RBP12.37□□□□□ -0.43
FBXO28-205ENST00000523990 OR5A1Q8NGJ0 315 aa12.37□□□□□ -0.43
FBXO28-205ENST00000523990 CHCHD10Q8WYQ3 142 aaPredicted RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms