RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 ASH1LQ9NR48 2969 aaKnown RBP1.74□□□□□ -2.13
SKP1-212ENST00000523966 SMCO4Q9NRQ5 59 aa1.74□□□□□ -2.13
SKP1-212ENST00000523966 DOK5Q9P104 306 aa1.74□□□□□ -2.13
SKP1-212ENST00000523966 FUT9Q9Y231 359 aa1.74□□□□□ -2.13
SKP1-212ENST00000523966 HIGD1AQ9Y241 93 aa1.74□□□□□ -2.13
SKP1-212ENST00000523966 WNK1Q9H4A3 2382 aa1.74□□□□□ -2.13
SKP1-212ENST00000523966 FLNAP21333 2647 aaKnown RBP1.74□□□□□ -2.13
SKP1-212ENST00000523966 HECTD1Q9ULT8 2610 aa1.74□□□□□ -2.13
SKP1-212ENST00000523966 APCP25054 2843 aa1.74□□□□□ -2.13
SKP1-212ENST00000523966 TEX15Q9BXT5 2789 aa1.74□□□□□ -2.13
SKP1-212ENST00000523966 CELSR2Q9HCU4 2923 aa1.73□□□□□ -2.13
SKP1-212ENST00000523966 JMJD1CQ15652 2540 aa1.73□□□□□ -2.13
SKP1-212ENST00000523966 A0A087WWC5 75 aa1.73□□□□□ -2.13
SKP1-212ENST00000523966 TRAV41A0A0B4J266 112 aa1.73□□□□□ -2.13
SKP1-212ENST00000523966 TRGV4A0A0C4DH28 118 aa1.73□□□□□ -2.13
SKP1-212ENST00000523966 A0A1B0GV50 99 aa1.73□□□□□ -2.13
SKP1-212ENST00000523966 TMEM213A2RRL7 107 aa1.73□□□□□ -2.13
SKP1-212ENST00000523966 ZNF727A8MUV8 499 aa1.73□□□□□ -2.13
SKP1-212ENST00000523966 H3BQ15 152 aa1.73□□□□□ -2.13
SKP1-212ENST00000523966 M0R036 132 aa1.73□□□□□ -2.13
SKP1-212ENST00000523966 MT-ND4LP03901 98 aa1.73□□□□□ -2.13
SKP1-212ENST00000523966 SRP19P09132 144 aaKnown RBP1.73□□□□□ -2.13
SKP1-212ENST00000523966 NBEAP1P0C6P0 100 aa1.73□□□□□ -2.13
SKP1-212ENST00000523966 APELAP0DMC3 54 aa1.73□□□□□ -2.13
SKP1-212ENST00000523966 CD99P14209 185 aa1.73□□□□□ -2.13
SKP1-212ENST00000523966 RPL7P18124 248 aaKnown RBP1.73□□□□□ -2.13
SKP1-212ENST00000523966 SRP14P37108 136 aaKnown RBP1.73□□□□□ -2.13
SKP1-212ENST00000523966 CCL20P78556 96 aa1.73□□□□□ -2.13
SKP1-212ENST00000523966 RHOGP84095 191 aa1.73□□□□□ -2.13
SKP1-212ENST00000523966 RPL19P84098 196 aaKnown RBP1.73□□□□□ -2.13
SKP1-212ENST00000523966 ZNF90Q03938 601 aa1.73□□□□□ -2.13
SKP1-212ENST00000523966 PDE6HQ13956 83 aa1.73□□□□□ -2.13
SKP1-212ENST00000523966 DEFB112Q30KQ8 113 aa1.73□□□□□ -2.13
SKP1-212ENST00000523966 Q56UQ5 140 aa1.73□□□□□ -2.13
SKP1-212ENST00000523966 SAPCD1Q5SSQ6 148 aa1.73□□□□□ -2.13
SKP1-212ENST00000523966 C1orf194Q5T5A4 169 aa1.73□□□□□ -2.13
SKP1-212ENST00000523966 SAMD13Q5VXD3 122 aa1.73□□□□□ -2.13
SKP1-212ENST00000523966 SDIM1Q6ZPB5 146 aa1.73□□□□□ -2.13
SKP1-212ENST00000523966 LINC00305Q7Z4B0 112 aa1.73□□□□□ -2.13
SKP1-212ENST00000523966 BPIFA4PQ86YQ2 179 aa1.73□□□□□ -2.13
SKP1-212ENST00000523966 ZFAND2AQ8N6M9 145 aa1.73□□□□□ -2.13
SKP1-212ENST00000523966 SMIM7Q9BQ49 75 aa1.73□□□□□ -2.13
SKP1-212ENST00000523966 BIN3Q9NQY0 253 aa1.73□□□□□ -2.13
SKP1-212ENST00000523966 TMEM242Q9NWH2 141 aa1.73□□□□□ -2.13
SKP1-212ENST00000523966 MRPL27Q9P0M9 148 aaKnown RBP1.73□□□□□ -2.13
SKP1-212ENST00000523966 TMEM14CQ9P0S9 112 aa1.73□□□□□ -2.13
SKP1-212ENST00000523966 NAT8Q9UHE5 227 aa1.73□□□□□ -2.13
SKP1-212ENST00000523966 LY96Q9Y6Y9 160 aa1.73□□□□□ -2.13
SKP1-212ENST00000523966 F8P00451 2351 aa1.73□□□□□ -2.13
SKP1-212ENST00000523966 CR1P17927 2039 aa1.73□□□□□ -2.13
SKP1-212ENST00000523966 ZANQ9Y493 2812 aa1.72□□□□□ -2.13
SKP1-212ENST00000523966 C2CD3Q4AC94 2353 aa1.72□□□□□ -2.13
SKP1-212ENST00000523966 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.72□□□□□ -2.13
SKP1-212ENST00000523966 C7orf77A4D0Y5 90 aa1.72□□□□□ -2.13
SKP1-212ENST00000523966 OR2T8A6NH00 312 aa1.72□□□□□ -2.13
SKP1-212ENST00000523966 C9JCJ5 164 aa1.72□□□□□ -2.13
SKP1-212ENST00000523966 G3V318 75 aa1.72□□□□□ -2.13
SKP1-212ENST00000523966 NDUFA4O00483 81 aa1.72□□□□□ -2.13
SKP1-212ENST00000523966 TGOLN2O43493 480 aa1.72□□□□□ -2.13
SKP1-212ENST00000523966 GGCTO75223 188 aaKnown RBP1.72□□□□□ -2.13
SKP1-212ENST00000523966 CRYBA1P05813 215 aa1.72□□□□□ -2.13
SKP1-212ENST00000523966 OR10J4P0C629 311 aa1.72□□□□□ -2.13
SKP1-212ENST00000523966 HIST1H1EP10412 219 aaKnown RBP1.72□□□□□ -2.13
SKP1-212ENST00000523966 ADCYAP1P18509 176 aa1.72□□□□□ -2.13
SKP1-212ENST00000523966 NPPCP23582 126 aa1.72□□□□□ -2.13
SKP1-212ENST00000523966 S100PP25815 95 aa1.72□□□□□ -2.13
SKP1-212ENST00000523966 CSN1S1P47710 185 aa1.72□□□□□ -2.13
SKP1-212ENST00000523966 CEBPGP53567 150 aa1.72□□□□□ -2.13
SKP1-212ENST00000523966 TPPP2P59282 170 aa1.72□□□□□ -2.13
SKP1-212ENST00000523966 KRTAP12-3P60328 96 aa1.72□□□□□ -2.13
SKP1-212ENST00000523966 UBE2L3P68036 154 aaKnown RBP1.72□□□□□ -2.13
SKP1-212ENST00000523966 PSG9Q00887 426 aa1.72□□□□□ -2.13
SKP1-212ENST00000523966 MIR17HGQ75NE6 70 aa1.72□□□□□ -2.13
SKP1-212ENST00000523966 OR8I2Q8N0Y5 310 aa1.72□□□□□ -2.13
SKP1-212ENST00000523966 Q8N2B8 174 aa1.72□□□□□ -2.13
SKP1-212ENST00000523966 C5orf17Q8NAS9 161 aa1.72□□□□□ -2.13
SKP1-212ENST00000523966 WFDC11Q8NEX6 87 aa1.72□□□□□ -2.13
SKP1-212ENST00000523966 ZNF418Q8TF45 676 aaPredicted RBP1.72□□□□□ -2.13
SKP1-212ENST00000523966 FAM167A-AS1Q96KT0 104 aa1.72□□□□□ -2.13
SKP1-212ENST00000523966 IMMP2LQ96T52 175 aa1.72□□□□□ -2.13
SKP1-212ENST00000523966 HSPB9Q9BQS6 159 aa1.72□□□□□ -2.13
SKP1-212ENST00000523966 FAM103A1Q9BTL3 118 aaKnown RBP1.72□□□□□ -2.13
SKP1-212ENST00000523966 OTORQ9NRC9 128 aa1.72□□□□□ -2.13
SKP1-212ENST00000523966 RABAC1Q9UI14 185 aa1.72□□□□□ -2.13
SKP1-212ENST00000523966 TRBV19A0A075B6N1 114 aa1.71□□□□□ -2.14
SKP1-212ENST00000523966 TRAV9-1A0A075B6T8 112 aa1.71□□□□□ -2.14
SKP1-212ENST00000523966 MDFIC2A0A1B0GVS7 189 aa1.71□□□□□ -2.14
SKP1-212ENST00000523966 H3BRN7 92 aa1.71□□□□□ -2.14
SKP1-212ENST00000523966 H7BYZ3 331 aa1.71□□□□□ -2.14
SKP1-212ENST00000523966 SLC25A5P05141 298 aaKnown RBP1.71□□□□□ -2.14
SKP1-212ENST00000523966 IGLC2P0DOY2 106 aa1.71□□□□□ -2.14
SKP1-212ENST00000523966 CRYBB3P26998 211 aa1.71□□□□□ -2.14
SKP1-212ENST00000523966 PSMB8P28062 276 aa1.71□□□□□ -2.14
SKP1-212ENST00000523966 AKR1C3P42330 323 aa1.71□□□□□ -2.14
SKP1-212ENST00000523966 RPL35P42766 123 aaKnown RBP1.71□□□□□ -2.14
SKP1-212ENST00000523966 GNG4P50150 75 aa1.71□□□□□ -2.14
SKP1-212ENST00000523966 DAD1P61803 113 aa1.71□□□□□ -2.14
SKP1-212ENST00000523966 RANP62826 216 aaKnown RBP1.71□□□□□ -2.14
SKP1-212ENST00000523966 BLCAPP62952 87 aa1.71□□□□□ -2.14
SKP1-212ENST00000523966 ADIRFQ15847 76 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 162.1 ms