RNA–Protein interactions for RNA: ENST00000523824.5

NSMCE2-213, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-213ENST00000523824 STOML3Q8TAV4 291 aa4.93□□□□□ -1.62
NSMCE2-213ENST00000523824 AP1S3Q96PC3 154 aa4.93□□□□□ -1.62
NSMCE2-213ENST00000523824 TCEAL7Q9BRU2 100 aa4.93□□□□□ -1.62
NSMCE2-213ENST00000523824 LINC00474Q9P2X8 69 aa4.93□□□□□ -1.62
NSMCE2-213ENST00000523824 A0A096LNI7 61 aa4.92□□□□□ -1.62
NSMCE2-213ENST00000523824 BORCS7-ASMTA0A0B4J1R7 106 aa4.92□□□□□ -1.62
NSMCE2-213ENST00000523824 M0QY20 66 aa4.92□□□□□ -1.62
NSMCE2-213ENST00000523824 S100A9P06702 114 aaKnown RBP4.92□□□□□ -1.62
NSMCE2-213ENST00000523824 NKX2-5P52952 324 aaPredicted RBP4.92□□□□□ -1.62
NSMCE2-213ENST00000523824 AKR1C8PQ5T2L2 129 aa4.92□□□□□ -1.62
NSMCE2-213ENST00000523824 RPL7L1Q6DKI1 246 aaKnown RBP4.92□□□□□ -1.62
NSMCE2-213ENST00000523824 MAP1LC3B2A6NCE7 125 aa4.91□□□□□ -1.62
NSMCE2-213ENST00000523824 FAM231BA6NCW3 169 aa4.91□□□□□ -1.62
NSMCE2-213ENST00000523824 AMTP48728 403 aa4.91□□□□□ -1.62
NSMCE2-213ENST00000523824 FHITP49789 147 aa4.91□□□□□ -1.62
NSMCE2-213ENST00000523824 IFITM3Q01628 133 aa4.91□□□□□ -1.62
NSMCE2-213ENST00000523824 SUMO4Q6EEV6 95 aa4.91□□□□□ -1.62
NSMCE2-213ENST00000523824 BAGE2Q86Y30 109 aa4.91□□□□□ -1.62
NSMCE2-213ENST00000523824 INO80EQ8NBZ0 244 aaPredicted RBP4.91□□□□□ -1.62
NSMCE2-213ENST00000523824 TPPP3Q9BW30 176 aa4.91□□□□□ -1.62
NSMCE2-213ENST00000523824 MAP1LC3BQ9GZQ8 125 aa4.91□□□□□ -1.62
NSMCE2-213ENST00000523824 PKIGQ9Y2B9 76 aa4.91□□□□□ -1.62
NSMCE2-213ENST00000523824 GVQW2A0A096LPI5 108 aaPredicted RBP4.9□□□□□ -1.63
NSMCE2-213ENST00000523824 DEFA1P59665 94 aa4.9□□□□□ -1.63
NSMCE2-213ENST00000523824 COTL1Q14019 142 aa4.9□□□□□ -1.63
NSMCE2-213ENST00000523824 RASL11AQ6T310 242 aa4.9□□□□□ -1.63
NSMCE2-213ENST00000523824 CHCHD10Q8WYQ3 142 aaPredicted RBP4.9□□□□□ -1.63
NSMCE2-213ENST00000523824 PGLYRP4Q96LB8 373 aa4.9□□□□□ -1.63
NSMCE2-213ENST00000523824 MLST8Q9BVC4 326 aa4.9□□□□□ -1.63
NSMCE2-213ENST00000523824 NIT2Q9NQR4 276 aa4.9□□□□□ -1.63
NSMCE2-213ENST00000523824 MUC2Q02817 5179 aa4.89□□□□□ -1.63
NSMCE2-213ENST00000523824 PAGE4O60829 102 aa4.89□□□□□ -1.63
NSMCE2-213ENST00000523824 AMMECR1LQ6DCA0 310 aa4.89□□□□□ -1.63
NSMCE2-213ENST00000523824 ZNF664Q8N3J9 261 aa4.89□□□□□ -1.63
NSMCE2-213ENST00000523824 TRAV26-2A0A0B4J265 109 aa4.88□□□□□ -1.63
NSMCE2-213ENST00000523824 A0A0U1RQV1 116 aa4.88□□□□□ -1.63
NSMCE2-213ENST00000523824 CACNG7P62955 275 aa4.88□□□□□ -1.63
NSMCE2-213ENST00000523824 Q5BKY6 102 aa4.88□□□□□ -1.63
NSMCE2-213ENST00000523824 RNASEKQ6P5S7 137 aaKnown RBP4.88□□□□□ -1.63
NSMCE2-213ENST00000523824 LINC00526Q96FQ7 95 aa4.88□□□□□ -1.63
NSMCE2-213ENST00000523824 CARD19Q96LW7 228 aa4.88□□□□□ -1.63
NSMCE2-213ENST00000523824 ALG5Q9Y673 324 aa4.88□□□□□ -1.63
NSMCE2-213ENST00000523824 FXYD6-FXYD2A0A087WZ82 144 aa4.87□□□□□ -1.63
NSMCE2-213ENST00000523824 ZNF561-AS1K7EIQ3 104 aa4.87□□□□□ -1.63
NSMCE2-213ENST00000523824 PFDN1O60925 122 aa4.87□□□□□ -1.63
NSMCE2-213ENST00000523824 TRGC1P0CF51 173 aa4.87□□□□□ -1.63
NSMCE2-213ENST00000523824 FOXI1Q12951 378 aa4.87□□□□□ -1.63
NSMCE2-213ENST00000523824 GAGE2BQ13066 116 aa4.87□□□□□ -1.63
NSMCE2-213ENST00000523824 TMUB2Q71RG4 321 aa4.87□□□□□ -1.63
NSMCE2-213ENST00000523824 FER1L6-AS1Q8NA97 138 aa4.87□□□□□ -1.63
NSMCE2-213ENST00000523824 MED28Q9H204 178 aa4.87□□□□□ -1.63
NSMCE2-213ENST00000523824 PSORS1C2Q9UIG4 136 aa4.87□□□□□ -1.63
NSMCE2-213ENST00000523824 IGHV1-58A0A0C4DH39 117 aa4.86□□□□□ -1.63
NSMCE2-213ENST00000523824 A0A1B0GV50 99 aa4.86□□□□□ -1.63
NSMCE2-213ENST00000523824 F2Z2F3 143 aa4.86□□□□□ -1.63
NSMCE2-213ENST00000523824 MT-ND6P03923 174 aa4.86□□□□□ -1.63
NSMCE2-213ENST00000523824 IGLC6P0CF74 106 aa4.86□□□□□ -1.63
NSMCE2-213ENST00000523824 XCL1P47992 114 aa4.86□□□□□ -1.63
NSMCE2-213ENST00000523824 RPS20P60866 119 aaKnown RBP4.86□□□□□ -1.63
NSMCE2-213ENST00000523824 SYCNQ0VAF6 134 aa4.86□□□□□ -1.63
NSMCE2-213ENST00000523824 OR2D3Q8NGH3 330 aa4.86□□□□□ -1.63
NSMCE2-213ENST00000523824 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.85□□□□□ -1.63
NSMCE2-213ENST00000523824 LOC107984640A0A0U1RRK4 108 aa4.85□□□□□ -1.63
NSMCE2-213ENST00000523824 A0A1W2PNN7 141 aa4.85□□□□□ -1.63
NSMCE2-213ENST00000523824 IGKV2-29A2NJV5 120 aaPredicted RBP4.85□□□□□ -1.63
NSMCE2-213ENST00000523824 XKRY2A2RUG3 117 aa4.85□□□□□ -1.63
NSMCE2-213ENST00000523824 H7C423 109 aa4.85□□□□□ -1.63
NSMCE2-213ENST00000523824 FGF6P10767 208 aa4.85□□□□□ -1.63
NSMCE2-213ENST00000523824 NTF3P20783 257 aa4.85□□□□□ -1.63
NSMCE2-213ENST00000523824 RPL35P42766 123 aaKnown RBP4.85□□□□□ -1.63
NSMCE2-213ENST00000523824 PTTG1IPP53801 180 aa4.85□□□□□ -1.63
NSMCE2-213ENST00000523824 C1orf137Q5JT78 98 aa4.85□□□□□ -1.63
NSMCE2-213ENST00000523824 PRR26Q8N8Z3 221 aa4.85□□□□□ -1.63
NSMCE2-213ENST00000523824 OR5A1Q8NGJ0 315 aa4.85□□□□□ -1.63
NSMCE2-213ENST00000523824 SFT2D1Q8WV19 159 aa4.85□□□□□ -1.63
NSMCE2-213ENST00000523824 BTF3L4Q96K17 158 aa4.85□□□□□ -1.63
NSMCE2-213ENST00000523824 KRTAP4-8A0A0G2JLE6 195 aa4.84□□□□□ -1.63
NSMCE2-213ENST00000523824 LINC00959A0A1B0GUT2 108 aa4.84□□□□□ -1.63
NSMCE2-213ENST00000523824 CCL25O15444 150 aa4.84□□□□□ -1.63
NSMCE2-213ENST00000523824 NCR2O95944 276 aa4.84□□□□□ -1.63
NSMCE2-213ENST00000523824 APCSP02743 223 aa4.84□□□□□ -1.63
NSMCE2-213ENST00000523824 GIPP09681 153 aaPredicted RBP4.84□□□□□ -1.63
NSMCE2-213ENST00000523824 PRR4Q16378 134 aa4.84□□□□□ -1.63
NSMCE2-213ENST00000523824 LYZL1Q6UWQ5 148 aa4.84□□□□□ -1.63
NSMCE2-213ENST00000523824 Q6ZNX1 250 aa4.84□□□□□ -1.63
NSMCE2-213ENST00000523824 KCNRGQ8N5I3 272 aa4.84□□□□□ -1.63
NSMCE2-213ENST00000523824 GATD1Q8NB37 220 aa4.84□□□□□ -1.63
NSMCE2-213ENST00000523824 DIRC1Q969H9 104 aa4.84□□□□□ -1.63
NSMCE2-213ENST00000523824 ISOC2Q96AB3 205 aa4.84□□□□□ -1.63
NSMCE2-213ENST00000523824 TMEM101Q96IK0 257 aa4.84□□□□□ -1.63
NSMCE2-213ENST00000523824 IFNA1P01562 189 aa4.83□□□□□ -1.64
NSMCE2-213ENST00000523824 ZNF25P17030 456 aaPredicted RBP4.83□□□□□ -1.64
NSMCE2-213ENST00000523824 CAMPP49913 170 aa4.83□□□□□ -1.64
NSMCE2-213ENST00000523824 SS18Q15532 418 aa4.83□□□□□ -1.64
NSMCE2-213ENST00000523824 TWIST1Q15672 202 aa4.83□□□□□ -1.64
NSMCE2-213ENST00000523824 C9orf116Q5BN46 136 aaPredicted RBP4.83□□□□□ -1.64
NSMCE2-213ENST00000523824 FAM213BQ8TBF2 198 aa4.83□□□□□ -1.64
NSMCE2-213ENST00000523824 MBD3L1Q8WWY6 194 aa4.83□□□□□ -1.64
NSMCE2-213ENST00000523824 CYTL1Q9NRR1 136 aa4.83□□□□□ -1.64
NSMCE2-213ENST00000523824 C19orf71A6NCJ1 209 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms