RNA–Protein interactions for RNA: ENST00000523430.5

SQLE-206, Transcript of squalene epoxidase, humanhuman

TSL 2 BASIC

Gene SQLE, Length 1,879 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-206ENST00000523430 TIMM17AQ99595 171 aa14.75□□□□□ -0.05
SQLE-206ENST00000523430 ANK2Q01484 3957 aa14.75□□□□□ -0.05
SQLE-206ENST00000523430 TRBV7-3A0A075B6L6 115 aa14.74□□□□□ -0.05
SQLE-206ENST00000523430 IGHV4-28A0A0C4DH34 117 aa14.74□□□□□ -0.05
SQLE-206ENST00000523430 LINC01549A6NIU2 74 aa14.74□□□□□ -0.05
SQLE-206ENST00000523430 ZC2HC1BQ5TFG8 222 aa14.74□□□□□ -0.05
SQLE-206ENST00000523430 TMEM141Q96I45 108 aa14.74□□□□□ -0.05
SQLE-206ENST00000523430 CHCHD7Q9BUK0 85 aa14.74□□□□□ -0.05
SQLE-206ENST00000523430 TRGV4A0A0C4DH28 118 aa14.73□□□□□ -0.05
SQLE-206ENST00000523430 LOC100131303A0A0U1RQF7 123 aa14.73□□□□□ -0.05
SQLE-206ENST00000523430 GAGE12JA6NER3 117 aa14.73□□□□□ -0.05
SQLE-206ENST00000523430 F8VRH5 84 aa14.73□□□□□ -0.05
SQLE-206ENST00000523430 RPL36AP83881 106 aaKnown RBP14.73□□□□□ -0.05
SQLE-206ENST00000523430 GAGE1Q13065 139 aa14.73□□□□□ -0.05
SQLE-206ENST00000523430 GAGE4Q13068 117 aa14.73□□□□□ -0.05
SQLE-206ENST00000523430 GAGE5Q13069 117 aa14.73□□□□□ -0.05
SQLE-206ENST00000523430 FHL2Q14192 279 aa14.73□□□□□ -0.05
SQLE-206ENST00000523430 GAGE13Q4V321 117 aa14.73□□□□□ -0.05
SQLE-206ENST00000523430 FAM222AQ5U5X8 452 aa14.73□□□□□ -0.05
SQLE-206ENST00000523430 RPL36ALQ969Q0 106 aaKnown RBP14.73□□□□□ -0.05
SQLE-206ENST00000523430 CHTOPQ9Y3Y2 248 aaKnown RBP14.73□□□□□ -0.05
SQLE-206ENST00000523430 PRSS29PA6NIE9 313 aa14.72□□□□□ -0.05
SQLE-206ENST00000523430 RNF183Q96D59 192 aa14.72□□□□□ -0.05
SQLE-206ENST00000523430 OPRPNQ99935 248 aaPredicted RBP14.72□□□□□ -0.05
SQLE-206ENST00000523430 HHLA3Q9XRX5 114 aa14.72□□□□□ -0.05
SQLE-206ENST00000523430 PKD1L1Q8TDX9 2849 aa14.72□□□□□ -0.05
SQLE-206ENST00000523430 CIDEAO60543 219 aa14.72□□□□□ -0.05
SQLE-206ENST00000523430 COTL1Q14019 142 aa14.72□□□□□ -0.05
SQLE-206ENST00000523430 Q8NAQ8 132 aa14.72□□□□□ -0.05
SQLE-206ENST00000523430 TRBV6-4A0A1B0GX49 114 aa14.71□□□□□ -0.05
SQLE-206ENST00000523430 ZMAT5Q9UDW3 170 aaKnown RBP14.71□□□□□ -0.05
SQLE-206ENST00000523430 COL6A5A8TX70 2615 aa14.7□□□□□ -0.06
SQLE-206ENST00000523430 NBEAL2Q6ZNJ1 2754 aa14.7□□□□□ -0.06
SQLE-206ENST00000523430 UBE2D3P61077 147 aa14.7□□□□□ -0.06
SQLE-206ENST00000523430 UBE2D2P62837 147 aa14.7□□□□□ -0.06
SQLE-206ENST00000523430 DNAH3Q8TD57 4116 aa14.7□□□□□ -0.06
SQLE-206ENST00000523430 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.69□□□□□ -0.06
SQLE-206ENST00000523430 IGKV2-29A2NJV5 120 aaPredicted RBP14.69□□□□□ -0.06
SQLE-206ENST00000523430 PLNP26678 52 aa14.69□□□□□ -0.06
SQLE-206ENST00000523430 LYRM9A8MSI8 78 aa14.69□□□□□ -0.06
SQLE-206ENST00000523430 MIFP14174 115 aa14.69□□□□□ -0.06
SQLE-206ENST00000523430 HNRNPA3P51991 378 aaKnown RBP14.69□□□□□ -0.06
SQLE-206ENST00000523430 PMVKQ15126 192 aa14.69□□□□□ -0.06
SQLE-206ENST00000523430 CEMP1Q6PRD7 247 aaPredicted RBP14.68□□□□□ -0.06
SQLE-206ENST00000523430 CST9LQ9H4G1 147 aa14.68□□□□□ -0.06
SQLE-206ENST00000523430 IGLV4-3A0A075B6K6 122 aa14.67□□□□□ -0.06
SQLE-206ENST00000523430 SAMD5Q5TGI4 173 aa14.67□□□□□ -0.06
SQLE-206ENST00000523430 CELA1Q9UNI1 258 aa14.67□□□□□ -0.06
SQLE-206ENST00000523430 IGLV4-69A0A075B6H9 119 aa14.67□□□□□ -0.06
SQLE-206ENST00000523430 A8MZ25 164 aa14.67□□□□□ -0.06
SQLE-206ENST00000523430 DAZ4Q86SG3 579 aaKnown RBP14.67□□□□□ -0.06
SQLE-206ENST00000523430 FAM104AQ969W3 186 aa14.67□□□□□ -0.06
SQLE-206ENST00000523430 RETNQ9HD89 108 aa14.67□□□□□ -0.06
SQLE-206ENST00000523430 DAZ3Q9NR90 486 aaKnown RBP14.67□□□□□ -0.06
SQLE-206ENST00000523430 EREGO14944 169 aa14.66□□□□□ -0.06
SQLE-206ENST00000523430 COX8AP10176 69 aa14.66□□□□□ -0.06
SQLE-206ENST00000523430 CTAG1AP78358 180 aa14.66□□□□□ -0.06
SQLE-206ENST00000523430 SLC25A34Q6PIV7 304 aa14.66□□□□□ -0.06
SQLE-206ENST00000523430 IGKV2D-26A0A0A0MRZ7 120 aa14.65□□□□□ -0.06
SQLE-206ENST00000523430 NMUP48645 174 aa14.65□□□□□ -0.06
SQLE-206ENST00000523430 NTM-AS1Q6ZSK4 140 aa14.65□□□□□ -0.06
SQLE-206ENST00000523430 UBE2D4Q9Y2X8 147 aa14.65□□□□□ -0.06
SQLE-206ENST00000523430 FGF6P10767 208 aa14.65□□□□□ -0.06
SQLE-206ENST00000523430 PRADC1Q9BSG0 188 aa14.65□□□□□ -0.06
SQLE-206ENST00000523430 PYGO1Q9Y3Y4 419 aa14.65□□□□□ -0.06
SQLE-206ENST00000523430 LINC00694P0DN24 101 aa14.63□□□□□ -0.07
SQLE-206ENST00000523430 C11orf86A6NJI1 115 aa14.63□□□□□ -0.07
SQLE-206ENST00000523430 RNASE13Q5GAN3 156 aaKnown RBP14.63□□□□□ -0.07
SQLE-206ENST00000523430 PCP2Q8IVA1 136 aa14.63□□□□□ -0.07
SQLE-206ENST00000523430 MDFIQ99750 246 aa14.63□□□□□ -0.07
SQLE-206ENST00000523430 SNHG12Q9BXW3 62 aa14.63□□□□□ -0.07
SQLE-206ENST00000523430 SPANXA1Q9NS26 97 aa14.62□□□□□ -0.07
SQLE-206ENST00000523430 CRYBA4P53673 196 aa14.61□□□□□ -0.07
SQLE-206ENST00000523430 DAD1P61803 113 aa14.61□□□□□ -0.07
SQLE-206ENST00000523430 Q6ZUT4 128 aa14.61□□□□□ -0.07
SQLE-206ENST00000523430 TTTY13Q9BZ97 58 aa14.6□□□□□ -0.07
SQLE-206ENST00000523430 VCX2Q9H322 139 aa14.6□□□□□ -0.07
SQLE-206ENST00000523430 BOD1L2Q8IYS8 172 aa14.59□□□□□ -0.07
SQLE-206ENST00000523430 AMELXQ99217 191 aa14.59□□□□□ -0.07
SQLE-206ENST00000523430 MRPS16Q9Y3D3 137 aaKnown RBP14.59□□□□□ -0.07
SQLE-206ENST00000523430 PRB2P02812 416 aaPredicted RBP14.59□□□□□ -0.07
SQLE-206ENST00000523430 GYPEP15421 78 aa14.59□□□□□ -0.07
SQLE-206ENST00000523430 C2orf91Q6ZV80 131 aa14.59□□□□□ -0.07
SQLE-206ENST00000523430 SBSPONQ8IVN8 264 aa14.59□□□□□ -0.07
SQLE-206ENST00000523430 GTSF1LQ9H1H1 148 aa14.59□□□□□ -0.07
SQLE-206ENST00000523430 M0R143 59 aa14.58□□□□□ -0.08
SQLE-206ENST00000523430 SPART-AS1P0CW21 52 aa14.58□□□□□ -0.08
SQLE-206ENST00000523430 PAPPA-AS1Q5QFB9 102 aa14.58□□□□□ -0.08
SQLE-206ENST00000523430 PRO0255Q9UI72 69 aa14.58□□□□□ -0.08
SQLE-206ENST00000523430 NPSP0C0P6 89 aa14.57□□□□□ -0.08
SQLE-206ENST00000523430 CHAC1Q9BUX1 264 aa14.57□□□□□ -0.08
SQLE-206ENST00000523430 MRPL52Q86TS9 123 aaKnown RBP14.56□□□□□ -0.08
SQLE-206ENST00000523430 A0A0J9YXV3 536 aa14.55□□□□□ -0.08
SQLE-206ENST00000523430 BATFQ16520 125 aa14.55□□□□□ -0.08
SQLE-206ENST00000523430 NFE4Q86UQ8 179 aa14.55□□□□□ -0.08
SQLE-206ENST00000523430 TMEM243Q9BU79 118 aa14.55□□□□□ -0.08
SQLE-206ENST00000523430 TIMM21Q9BVV7 248 aa14.55□□□□□ -0.08
SQLE-206ENST00000523430 TRBV25-1A0A075B6N4 114 aa14.54□□□□□ -0.08
SQLE-206ENST00000523430 A0A0J9YY99 117 aa14.54□□□□□ -0.08
SQLE-206ENST00000523430 DLEU1O43261 78 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms