RNA–Protein interactions for RNA: ENST00000523237.1

CLN8-206, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 835 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-206ENST00000523237 C20orf203Q8NBC4 194 aa10.58□□□□□ -0.72
CLN8-206ENST00000523237 FAM210AQ96ND0 272 aa10.58□□□□□ -0.72
CLN8-206ENST00000523237 SMIM7Q9BQ49 75 aa10.58□□□□□ -0.72
CLN8-206ENST00000523237 TRAV8-4A0A0B4J246 113 aa10.57□□□□□ -0.72
CLN8-206ENST00000523237 TEX261Q6UWH6 196 aa10.57□□□□□ -0.72
CLN8-206ENST00000523237 DEFB104AQ8WTQ1 72 aa10.57□□□□□ -0.72
CLN8-206ENST00000523237 BORCS7Q96B45 105 aa10.57□□□□□ -0.72
CLN8-206ENST00000523237 FAT1Q14517 4588 aa10.57□□□□□ -0.72
CLN8-206ENST00000523237 IGLV4-60A0A075B6I1 120 aa10.56□□□□□ -0.72
CLN8-206ENST00000523237 ZNF727A8MUV8 499 aa10.56□□□□□ -0.72
CLN8-206ENST00000523237 PLA2G1BP04054 148 aaKnown RBP10.56□□□□□ -0.72
CLN8-206ENST00000523237 FOXA3P55318 350 aaPredicted RBP10.56□□□□□ -0.72
CLN8-206ENST00000523237 KRTAP26-1Q6PEX3 210 aa10.56□□□□□ -0.72
CLN8-206ENST00000523237 SCXQ7RTU7 201 aa10.56□□□□□ -0.72
CLN8-206ENST00000523237 LINC01551Q86U37 167 aa10.56□□□□□ -0.72
CLN8-206ENST00000523237 CHAC1Q9BUX1 264 aa10.56□□□□□ -0.72
CLN8-206ENST00000523237 IGLV10-54A0A075B6I4 117 aa10.55□□□□□ -0.72
CLN8-206ENST00000523237 A0A1B0GVG6 124 aa10.55□□□□□ -0.72
CLN8-206ENST00000523237 DGAT2L7PQ6IED9 249 aa10.55□□□□□ -0.72
CLN8-206ENST00000523237 LINC00528Q8N1L1 170 aa10.55□□□□□ -0.72
CLN8-206ENST00000523237 RPL39LQ96EH5 51 aaKnown RBP10.55□□□□□ -0.72
CLN8-206ENST00000523237 VPS13BQ7Z7G8 4022 aa10.55□□□□□ -0.72
CLN8-206ENST00000523237 PRSS1P07477 247 aa10.54□□□□□ -0.72
CLN8-206ENST00000523237 SRP19P09132 144 aaKnown RBP10.54□□□□□ -0.72
CLN8-206ENST00000523237 TSKUQ8WUA8 353 aa10.54□□□□□ -0.72
CLN8-206ENST00000523237 GFRA4Q9GZZ7 299 aa10.54□□□□□ -0.72
CLN8-206ENST00000523237 NCR2O95944 276 aa10.53□□□□□ -0.72
CLN8-206ENST00000523237 CLRN3Q8NCR9 226 aa10.53□□□□□ -0.72
CLN8-206ENST00000523237 OSTCQ9NRP0 149 aa10.53□□□□□ -0.72
CLN8-206ENST00000523237 A0A1B0GUT8 65 aa10.52□□□□□ -0.73
CLN8-206ENST00000523237 FAM231BA6NCW3 169 aa10.52□□□□□ -0.73
CLN8-206ENST00000523237 SDHAF1A6NFY7 115 aa10.52□□□□□ -0.73
CLN8-206ENST00000523237 HIGD1CA8MV81 97 aa10.52□□□□□ -0.73
CLN8-206ENST00000523237 DNAH8Q96JB1 4490 aa10.51□□□□□ -0.73
CLN8-206ENST00000523237 APCSP02743 223 aa10.51□□□□□ -0.73
CLN8-206ENST00000523237 AMMECR1LQ6DCA0 310 aa10.51□□□□□ -0.73
CLN8-206ENST00000523237 C9orf163Q8N9P6 203 aa10.51□□□□□ -0.73
CLN8-206ENST00000523237 CIRBP-AS1Q8TBR5 109 aa10.51□□□□□ -0.73
CLN8-206ENST00000523237 H7C423 109 aa10.5□□□□□ -0.73
CLN8-206ENST00000523237 FAM74A3Q4VXF1 159 aa10.5□□□□□ -0.73
CLN8-206ENST00000523237 TMEM191AQ9H0A3 160 aa10.5□□□□□ -0.73
CLN8-206ENST00000523237 TRBV6-5A0A0K0K1A5 114 aa10.49□□□□□ -0.73
CLN8-206ENST00000523237 hDV102S1A0JD36 115 aa10.49□□□□□ -0.73
CLN8-206ENST00000523237 I3L3M4 83 aa10.49□□□□□ -0.73
CLN8-206ENST00000523237 PMCHP20382 165 aa10.49□□□□□ -0.73
CLN8-206ENST00000523237 TMEM241Q24JQ0 296 aa10.49□□□□□ -0.73
CLN8-206ENST00000523237 FLG2Q5D862 2391 aaPredicted RBP10.48□□□□□ -0.73
CLN8-206ENST00000523237 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.48□□□□□ -0.73
CLN8-206ENST00000523237 IGKV2-29A2NJV5 120 aaPredicted RBP10.48□□□□□ -0.73
CLN8-206ENST00000523237 RNASEKQ6P5S7 137 aaKnown RBP10.48□□□□□ -0.73
CLN8-206ENST00000523237 ISOC2Q96AB3 205 aa10.48□□□□□ -0.73
CLN8-206ENST00000523237 ST20Q9HBF5 79 aa10.48□□□□□ -0.73
CLN8-206ENST00000523237 V9GYV3 84 aa10.48□□□□□ -0.73
CLN8-206ENST00000523237 IGKV3OR2-268A0A0C4DH90 116 aa10.47□□□□□ -0.73
CLN8-206ENST00000523237 FGF6P10767 208 aa10.47□□□□□ -0.73
CLN8-206ENST00000523237 CNBPP62633 177 aaKnown RBP10.47□□□□□ -0.73
CLN8-206ENST00000523237 RIGQ13278 110 aa10.47□□□□□ -0.73
CLN8-206ENST00000523237 MRAP2Q96G30 205 aa10.47□□□□□ -0.73
CLN8-206ENST00000523237 AP5S1Q9NUS5 200 aa10.47□□□□□ -0.73
CLN8-206ENST00000523237 DMBT1Q9UGM3 2413 aaPredicted RBP10.47□□□□□ -0.73
CLN8-206ENST00000523237 GAS8-AS1O95177 125 aa10.46□□□□□ -0.73
CLN8-206ENST00000523237 ZNF25P17030 456 aaPredicted RBP10.46□□□□□ -0.73
CLN8-206ENST00000523237 RAB4AP20338 218 aa10.46□□□□□ -0.73
CLN8-206ENST00000523237 RPL23P62829 140 aaKnown RBP10.46□□□□□ -0.73
CLN8-206ENST00000523237 PEA15Q15121 130 aa10.46□□□□□ -0.73
CLN8-206ENST00000523237 AMN1Q8IY45 258 aa10.46□□□□□ -0.73
CLN8-206ENST00000523237 RNF185Q96GF1 192 aa10.46□□□□□ -0.73
CLN8-206ENST00000523237 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.45□□□□□ -0.74
CLN8-206ENST00000523237 GAGE12HA6NDE8 117 aa10.45□□□□□ -0.74
CLN8-206ENST00000523237 ADIRFQ15847 76 aa10.45□□□□□ -0.74
CLN8-206ENST00000523237 CFAP161Q6P656 301 aa10.45□□□□□ -0.74
CLN8-206ENST00000523237 SDIM1Q6ZPB5 146 aa10.45□□□□□ -0.74
CLN8-206ENST00000523237 NUP35Q8NFH5 326 aa10.45□□□□□ -0.74
CLN8-206ENST00000523237 TMEM101Q96IK0 257 aa10.45□□□□□ -0.74
CLN8-206ENST00000523237 BTF3L4Q96K17 158 aa10.45□□□□□ -0.74
CLN8-206ENST00000523237 NAT8Q9UHE5 227 aa10.45□□□□□ -0.74
CLN8-206ENST00000523237 NAT8BQ9UHF3 227 aa10.45□□□□□ -0.74
CLN8-206ENST00000523237 C9JQL5 133 aa10.44□□□□□ -0.74
CLN8-206ENST00000523237 TSHBP01222 138 aa10.44□□□□□ -0.74
CLN8-206ENST00000523237 RPS10P46783 165 aaKnown RBP10.44□□□□□ -0.74
CLN8-206ENST00000523237 SMDT1Q9H4I9 107 aa10.44□□□□□ -0.74
CLN8-206ENST00000523237 TMEM242Q9NWH2 141 aa10.44□□□□□ -0.74
CLN8-206ENST00000523237 TRBV27A0A0K0K1C4 114 aa10.43□□□□□ -0.74
CLN8-206ENST00000523237 ESDP10768 282 aa10.43□□□□□ -0.74
CLN8-206ENST00000523237 POLR2KP53803 58 aaKnown RBP10.43□□□□□ -0.74
CLN8-206ENST00000523237 CHCHD10Q8WYQ3 142 aaPredicted RBP10.43□□□□□ -0.74
CLN8-206ENST00000523237 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.43□□□□□ -0.74
CLN8-206ENST00000523237 MYCBP2O75592 4640 aa10.43□□□□□ -0.74
CLN8-206ENST00000523237 IGHV3-64A0A075B6Q5 118 aa10.42□□□□□ -0.74
CLN8-206ENST00000523237 PPP1R17O96001 155 aa10.42□□□□□ -0.74
CLN8-206ENST00000523237 SRSF3P84103 164 aaKnown RBP10.42□□□□□ -0.74
CLN8-206ENST00000523237 C15orf56Q8N910 161 aa10.42□□□□□ -0.74
CLN8-206ENST00000523237 OR5A1Q8NGJ0 315 aa10.42□□□□□ -0.74
CLN8-206ENST00000523237 J3QL48 77 aa10.41□□□□□ -0.74
CLN8-206ENST00000523237 KRTAP10-4P60372 401 aaPredicted RBP10.41□□□□□ -0.74
CLN8-206ENST00000523237 SMIM27A0A1W2PRY6 76 aa10.4□□□□□ -0.74
CLN8-206ENST00000523237 C7orf77A4D0Y5 90 aa10.4□□□□□ -0.74
CLN8-206ENST00000523237 SMKR1H3BMG3 65 aa10.4□□□□□ -0.74
CLN8-206ENST00000523237 VCYO14598 125 aa10.4□□□□□ -0.74
CLN8-206ENST00000523237 SLPIP03973 132 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms