RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 CHAC1Q9BUX1 264 aa8.03□□□□□ -1.12
VEGFA-223ENST00000523125 GFRA4Q9GZZ7 299 aa8.03□□□□□ -1.12
VEGFA-223ENST00000523125 TRAV26-2A0A0B4J265 109 aa8.02□□□□□ -1.13
VEGFA-223ENST00000523125 REG3AQ06141 175 aa8.02□□□□□ -1.13
VEGFA-223ENST00000523125 FAM231DQ6ZW35 169 aa8.02□□□□□ -1.13
VEGFA-223ENST00000523125 LINC00528Q8N1L1 170 aa8.02□□□□□ -1.13
VEGFA-223ENST00000523125 IGLV10-54A0A075B6I4 117 aa8.01□□□□□ -1.13
VEGFA-223ENST00000523125 GATCO43716 136 aaKnown RBP8.01□□□□□ -1.13
VEGFA-223ENST00000523125 CIRBP-AS1Q8TBR5 109 aa8.01□□□□□ -1.13
VEGFA-223ENST00000523125 A0A1B0GVG6 124 aa8□□□□□ -1.13
VEGFA-223ENST00000523125 A8MWL6 223 aa8□□□□□ -1.13
VEGFA-223ENST00000523125 PLA2G1BP04054 148 aaKnown RBP8□□□□□ -1.13
VEGFA-223ENST00000523125 KRTAP10-4P60372 401 aaPredicted RBP8□□□□□ -1.13
VEGFA-223ENST00000523125 DGAT2L7PQ6IED9 249 aa8□□□□□ -1.13
VEGFA-223ENST00000523125 RPL39LQ96EH5 51 aaKnown RBP8□□□□□ -1.13
VEGFA-223ENST00000523125 TRAV8-4A0A0B4J246 113 aa7.99□□□□□ -1.13
VEGFA-223ENST00000523125 NDUFS6O75380 124 aaKnown RBP7.99□□□□□ -1.13
VEGFA-223ENST00000523125 AMTP48728 403 aa7.99□□□□□ -1.13
VEGFA-223ENST00000523125 CEBPGP53567 150 aa7.99□□□□□ -1.13
VEGFA-223ENST00000523125 COTL1Q14019 142 aa7.99□□□□□ -1.13
VEGFA-223ENST00000523125 C9orf163Q8N9P6 203 aa7.99□□□□□ -1.13
VEGFA-223ENST00000523125 FAM210AQ96ND0 272 aa7.99□□□□□ -1.13
VEGFA-223ENST00000523125 SRP19P09132 144 aaKnown RBP7.98□□□□□ -1.13
VEGFA-223ENST00000523125 CT83Q5H943 113 aa7.98□□□□□ -1.13
VEGFA-223ENST00000523125 LINC01551Q86U37 167 aa7.98□□□□□ -1.13
VEGFA-223ENST00000523125 SMIM7Q9BQ49 75 aa7.98□□□□□ -1.13
VEGFA-223ENST00000523125 EIF5A2Q9GZV4 153 aaKnown RBP7.98□□□□□ -1.13
VEGFA-223ENST00000523125 GAS8-AS1O95177 125 aa7.97□□□□□ -1.13
VEGFA-223ENST00000523125 SMIM15Q7Z3B0 74 aa7.97□□□□□ -1.13
VEGFA-223ENST00000523125 CLRN3Q8NCR9 226 aa7.97□□□□□ -1.13
VEGFA-223ENST00000523125 SDHAF1A6NFY7 115 aa7.96□□□□□ -1.14
VEGFA-223ENST00000523125 ZNF727A8MUV8 499 aa7.96□□□□□ -1.14
VEGFA-223ENST00000523125 UBE2L6O14933 153 aa7.96□□□□□ -1.14
VEGFA-223ENST00000523125 SLPIP03973 132 aa7.96□□□□□ -1.14
VEGFA-223ENST00000523125 TEX261Q6UWH6 196 aa7.96□□□□□ -1.14
VEGFA-223ENST00000523125 SDIM1Q6ZPB5 146 aa7.96□□□□□ -1.14
VEGFA-223ENST00000523125 PKHD1L1Q86WI1 4243 aa7.95□□□□□ -1.14
VEGFA-223ENST00000523125 TRBV6-5A0A0K0K1A5 114 aa7.95□□□□□ -1.14
VEGFA-223ENST00000523125 FAM231BA6NCW3 169 aa7.95□□□□□ -1.14
VEGFA-223ENST00000523125 HIGD1CA8MV81 97 aa7.95□□□□□ -1.14
VEGFA-223ENST00000523125 PANO1I0J062 215 aa7.95□□□□□ -1.14
VEGFA-223ENST00000523125 NCR2O95944 276 aa7.95□□□□□ -1.14
VEGFA-223ENST00000523125 CNBPP62633 177 aaKnown RBP7.95□□□□□ -1.14
VEGFA-223ENST00000523125 TSKUQ8WUA8 353 aa7.95□□□□□ -1.14
VEGFA-223ENST00000523125 OSTCQ9NRP0 149 aa7.95□□□□□ -1.14
VEGFA-223ENST00000523125 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.95□□□□□ -1.14
VEGFA-223ENST00000523125 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.94□□□□□ -1.14
VEGFA-223ENST00000523125 A0A1B0GUT8 65 aa7.94□□□□□ -1.14
VEGFA-223ENST00000523125 hDV102S1A0JD36 115 aa7.94□□□□□ -1.14
VEGFA-223ENST00000523125 IGKV2-29A2NJV5 120 aaPredicted RBP7.94□□□□□ -1.14
VEGFA-223ENST00000523125 RNF185Q96GF1 192 aa7.94□□□□□ -1.14
VEGFA-223ENST00000523125 TMEM191AQ9H0A3 160 aa7.94□□□□□ -1.14
VEGFA-223ENST00000523125 V9GYV3 84 aa7.94□□□□□ -1.14
VEGFA-223ENST00000523125 C9JQL5 133 aa7.93□□□□□ -1.14
VEGFA-223ENST00000523125 H7C423 109 aa7.93□□□□□ -1.14
VEGFA-223ENST00000523125 I3L3M4 83 aa7.93□□□□□ -1.14
VEGFA-223ENST00000523125 RAB4AP20338 218 aa7.93□□□□□ -1.14
VEGFA-223ENST00000523125 GAGE12HA6NDE8 117 aa7.92□□□□□ -1.14
VEGFA-223ENST00000523125 KRTAP29-1A8MX34 341 aaPredicted RBP7.92□□□□□ -1.14
VEGFA-223ENST00000523125 TSHBP01222 138 aa7.92□□□□□ -1.14
VEGFA-223ENST00000523125 APCSP02743 223 aa7.92□□□□□ -1.14
VEGFA-223ENST00000523125 FGF6P10767 208 aa7.92□□□□□ -1.14
VEGFA-223ENST00000523125 ESDP10768 282 aa7.92□□□□□ -1.14
VEGFA-223ENST00000523125 PMCHP20382 165 aa7.92□□□□□ -1.14
VEGFA-223ENST00000523125 RPS10P46783 165 aaKnown RBP7.92□□□□□ -1.14
VEGFA-223ENST00000523125 POLR2KP53803 58 aaKnown RBP7.92□□□□□ -1.14
VEGFA-223ENST00000523125 C15orf56Q8N910 161 aa7.92□□□□□ -1.14
VEGFA-223ENST00000523125 NUP35Q8NFH5 326 aa7.92□□□□□ -1.14
VEGFA-223ENST00000523125 ISOC2Q96AB3 205 aa7.92□□□□□ -1.14
VEGFA-223ENST00000523125 BORCS7Q96B45 105 aa7.92□□□□□ -1.14
VEGFA-223ENST00000523125 LRP1Q07954 4544 aaKnown RBP7.91□□□□□ -1.14
VEGFA-223ENST00000523125 IGKV3OR2-268A0A0C4DH90 116 aa7.91□□□□□ -1.14
VEGFA-223ENST00000523125 RPL23P62829 140 aaKnown RBP7.91□□□□□ -1.14
VEGFA-223ENST00000523125 SRSF3P84103 164 aaKnown RBP7.91□□□□□ -1.14
VEGFA-223ENST00000523125 CIRBPQ14011 172 aaKnown RBP7.91□□□□□ -1.14
VEGFA-223ENST00000523125 TMEM241Q24JQ0 296 aa7.91□□□□□ -1.14
VEGFA-223ENST00000523125 AMMECR1LQ6DCA0 310 aa7.91□□□□□ -1.14
VEGFA-223ENST00000523125 RNASEKQ6P5S7 137 aaKnown RBP7.91□□□□□ -1.14
VEGFA-223ENST00000523125 AMN1Q8IY45 258 aa7.91□□□□□ -1.14
VEGFA-223ENST00000523125 ST20Q9HBF5 79 aa7.91□□□□□ -1.14
VEGFA-223ENST00000523125 TRBV27A0A0K0K1C4 114 aa7.9□□□□□ -1.14
VEGFA-223ENST00000523125 ZNF25P17030 456 aaPredicted RBP7.9□□□□□ -1.14
VEGFA-223ENST00000523125 FAM74A3Q4VXF1 159 aa7.9□□□□□ -1.14
VEGFA-223ENST00000523125 CHCHD10Q8WYQ3 142 aaPredicted RBP7.9□□□□□ -1.14
VEGFA-223ENST00000523125 MRAP2Q96G30 205 aa7.9□□□□□ -1.14
VEGFA-223ENST00000523125 TMEM242Q9NWH2 141 aa7.9□□□□□ -1.14
VEGFA-223ENST00000523125 IGHV3-64A0A075B6Q5 118 aa7.89□□□□□ -1.15
VEGFA-223ENST00000523125 J3QL48 77 aa7.89□□□□□ -1.15
VEGFA-223ENST00000523125 OR5A1Q8NGJ0 315 aa7.89□□□□□ -1.15
VEGFA-223ENST00000523125 AP5S1Q9NUS5 200 aa7.89□□□□□ -1.15
VEGFA-223ENST00000523125 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.88□□□□□ -1.15
VEGFA-223ENST00000523125 SMKR1H3BMG3 65 aa7.88□□□□□ -1.15
VEGFA-223ENST00000523125 CHTF8P0CG12 524 aa7.88□□□□□ -1.15
VEGFA-223ENST00000523125 HNRNPA3P51991 378 aaKnown RBP7.88□□□□□ -1.15
VEGFA-223ENST00000523125 RPL37AP61513 92 aaKnown RBP7.88□□□□□ -1.15
VEGFA-223ENST00000523125 FOXI1Q12951 378 aa7.88□□□□□ -1.15
VEGFA-223ENST00000523125 RIGQ13278 110 aa7.88□□□□□ -1.15
VEGFA-223ENST00000523125 CFAP161Q6P656 301 aa7.88□□□□□ -1.15
VEGFA-223ENST00000523125 MRPL52Q86TS9 123 aaKnown RBP7.88□□□□□ -1.15
VEGFA-223ENST00000523125 NRACQ8N912 160 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 201.7 ms