RNA–Protein interactions for RNA: ENST00000521977.1

SHPRH-209, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 5

Gene SHPRH, Length 927 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-209ENST00000521977 NEGR1Q7Z3B1 354 aa6.7□□□□□ -1.34
SHPRH-209ENST00000521977 KIR2DL4Q99706 377 aa6.7□□□□□ -1.34
SHPRH-209ENST00000521977 TRBV7-3A0A075B6L6 115 aa6.69□□□□□ -1.34
SHPRH-209ENST00000521977 I3L3M4 83 aa6.69□□□□□ -1.34
SHPRH-209ENST00000521977 TSHBP01222 138 aa6.69□□□□□ -1.34
SHPRH-209ENST00000521977 ATP5G1P05496 136 aa6.69□□□□□ -1.34
SHPRH-209ENST00000521977 CRYBA4P53673 196 aa6.69□□□□□ -1.34
SHPRH-209ENST00000521977 UBE2D3P61077 147 aa6.69□□□□□ -1.34
SHPRH-209ENST00000521977 UBE2D2P62837 147 aa6.69□□□□□ -1.34
SHPRH-209ENST00000521977 RPL36AP83881 106 aaKnown RBP6.69□□□□□ -1.34
SHPRH-209ENST00000521977 C12orf74Q32Q52 190 aa6.69□□□□□ -1.34
SHPRH-209ENST00000521977 MRAPQ8TCY5 172 aa6.69□□□□□ -1.34
SHPRH-209ENST00000521977 RPL36ALQ969Q0 106 aaKnown RBP6.69□□□□□ -1.34
SHPRH-209ENST00000521977 B9D2Q9BPU9 175 aa6.69□□□□□ -1.34
SHPRH-209ENST00000521977 PRADC1Q9BSG0 188 aa6.69□□□□□ -1.34
SHPRH-209ENST00000521977 PRO0255Q9UI72 69 aa6.69□□□□□ -1.34
SHPRH-209ENST00000521977 HHLA3Q9XRX5 114 aa6.69□□□□□ -1.34
SHPRH-209ENST00000521977 A0A0J9YWU9 116 aa6.68□□□□□ -1.34
SHPRH-209ENST00000521977 LEPROTL1O95214 131 aa6.68□□□□□ -1.34
SHPRH-209ENST00000521977 AKR1D1P51857 326 aa6.68□□□□□ -1.34
SHPRH-209ENST00000521977 KRTAP19-4Q3LI73 84 aa6.68□□□□□ -1.34
SHPRH-209ENST00000521977 LINC00173Q6ZV60 143 aa6.68□□□□□ -1.34
SHPRH-209ENST00000521977 ZNRF2Q8NHG8 242 aa6.68□□□□□ -1.34
SHPRH-209ENST00000521977 TOMM6Q96B49 74 aa6.68□□□□□ -1.34
SHPRH-209ENST00000521977 ZMAT4Q9H898 229 aa6.68□□□□□ -1.34
SHPRH-209ENST00000521977 LOC100131303A0A0U1RQF7 123 aa6.67□□□□□ -1.34
SHPRH-209ENST00000521977 GAGE12JA6NER3 117 aa6.67□□□□□ -1.34
SHPRH-209ENST00000521977 LINC01549A6NIU2 74 aa6.67□□□□□ -1.34
SHPRH-209ENST00000521977 NUDT3O95989 172 aa6.67□□□□□ -1.34
SHPRH-209ENST00000521977 GAGE1Q13065 139 aa6.67□□□□□ -1.34
SHPRH-209ENST00000521977 GAGE4Q13068 117 aa6.67□□□□□ -1.34
SHPRH-209ENST00000521977 GAGE5Q13069 117 aa6.67□□□□□ -1.34
SHPRH-209ENST00000521977 GAGE13Q4V321 117 aa6.67□□□□□ -1.34
SHPRH-209ENST00000521977 DAZ4Q86SG3 579 aaKnown RBP6.67□□□□□ -1.34
SHPRH-209ENST00000521977 VSIG2Q96IQ7 327 aa6.67□□□□□ -1.34
SHPRH-209ENST00000521977 DAZ3Q9NR90 486 aaKnown RBP6.67□□□□□ -1.34
SHPRH-209ENST00000521977 HSPB8Q9UJY1 196 aa6.67□□□□□ -1.34
SHPRH-209ENST00000521977 PRKDCP78527 4128 aaKnown RBP6.66□□□□□ -1.34
SHPRH-209ENST00000521977 C3orf79P0CE67 100 aa6.66□□□□□ -1.34
SHPRH-209ENST00000521977 BTF3P20290 206 aaKnown RBP6.66□□□□□ -1.34
SHPRH-209ENST00000521977 G0S2P27469 103 aa6.66□□□□□ -1.34
SHPRH-209ENST00000521977 JOSD1Q15040 202 aaPredicted RBP6.66□□□□□ -1.34
SHPRH-209ENST00000521977 PYY3Q5JQD4 70 aa6.66□□□□□ -1.34
SHPRH-209ENST00000521977 C2orf66Q6UXQ4 117 aa6.66□□□□□ -1.34
SHPRH-209ENST00000521977 PHLDA1Q8WV24 401 aaPredicted RBP6.66□□□□□ -1.34
SHPRH-209ENST00000521977 CHCHD7Q9BUK0 85 aa6.66□□□□□ -1.34
SHPRH-209ENST00000521977 GTSF1LQ9H1H1 148 aa6.66□□□□□ -1.34
SHPRH-209ENST00000521977 IGHV3-38A0A0C4DH36 116 aa6.65□□□□□ -1.34
SHPRH-209ENST00000521977 GYPEP15421 78 aa6.65□□□□□ -1.34
SHPRH-209ENST00000521977 COTL1Q14019 142 aa6.65□□□□□ -1.34
SHPRH-209ENST00000521977 NTM-AS1Q6ZSK4 140 aa6.65□□□□□ -1.34
SHPRH-209ENST00000521977 Q6ZTC4 211 aa6.65□□□□□ -1.34
SHPRH-209ENST00000521977 SPATA12Q7Z6I5 190 aa6.65□□□□□ -1.34
SHPRH-209ENST00000521977 Q8N976 141 aa6.65□□□□□ -1.34
SHPRH-209ENST00000521977 C20orf203Q8NBC4 194 aa6.65□□□□□ -1.34
SHPRH-209ENST00000521977 DEFB104AQ8WTQ1 72 aa6.65□□□□□ -1.34
SHPRH-209ENST00000521977 CYSLTR1Q9Y271 337 aa6.65□□□□□ -1.34
SHPRH-209ENST00000521977 TENM3Q9P273 2699 aa6.64□□□□□ -1.35
SHPRH-209ENST00000521977 IGIPA6NJ69 53 aa6.64□□□□□ -1.35
SHPRH-209ENST00000521977 F5H768 121 aa6.64□□□□□ -1.35
SHPRH-209ENST00000521977 H3BNG1 76 aa6.64□□□□□ -1.35
SHPRH-209ENST00000521977 SYS1-DBNDD2H3BUS1 97 aa6.64□□□□□ -1.35
SHPRH-209ENST00000521977 ATP5LO75964 103 aa6.64□□□□□ -1.35
SHPRH-209ENST00000521977 SMIM6P0DI80 62 aa6.64□□□□□ -1.35
SHPRH-209ENST00000521977 KRTDAPP60985 99 aa6.64□□□□□ -1.35
SHPRH-209ENST00000521977 C11orf45Q8TAV5 145 aa6.64□□□□□ -1.35
SHPRH-209ENST00000521977 IFI27L1Q96BM0 104 aa6.64□□□□□ -1.35
SHPRH-209ENST00000521977 MAP1LC3CQ9BXW4 147 aa6.64□□□□□ -1.35
SHPRH-209ENST00000521977 TRAV26-1A0A087WT03 109 aa6.63□□□□□ -1.35
SHPRH-209ENST00000521977 H3BS24 57 aa6.63□□□□□ -1.35
SHPRH-209ENST00000521977 NHLRC4P0CG21 123 aaPredicted RBP6.63□□□□□ -1.35
SHPRH-209ENST00000521977 NANOS2P60321 138 aaKnown RBP6.63□□□□□ -1.35
SHPRH-209ENST00000521977 RPL39P62891 51 aaKnown RBP6.63□□□□□ -1.35
SHPRH-209ENST00000521977 TMEM97Q5BJF2 176 aa6.63□□□□□ -1.35
SHPRH-209ENST00000521977 PET117Q6UWS5 81 aa6.63□□□□□ -1.35
SHPRH-209ENST00000521977 ERASQ7Z444 233 aa6.63□□□□□ -1.35
SHPRH-209ENST00000521977 ATP6V0E2Q8NHE4 81 aa6.63□□□□□ -1.35
SHPRH-209ENST00000521977 TIMM17AQ99595 171 aa6.63□□□□□ -1.35
SHPRH-209ENST00000521977 A0A0J9YY99 117 aa6.62□□□□□ -1.35
SHPRH-209ENST00000521977 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.62□□□□□ -1.35
SHPRH-209ENST00000521977 NPSP0C0P6 89 aa6.62□□□□□ -1.35
SHPRH-209ENST00000521977 HTN3P15516 51 aa6.62□□□□□ -1.35
SHPRH-209ENST00000521977 DEFA6Q01524 100 aa6.62□□□□□ -1.35
SHPRH-209ENST00000521977 LINC01545Q5VT33 79 aa6.62□□□□□ -1.35
SHPRH-209ENST00000521977 LINC00518Q8N0U6 118 aa6.62□□□□□ -1.35
SHPRH-209ENST00000521977 TMEM141Q96I45 108 aa6.62□□□□□ -1.35
SHPRH-209ENST00000521977 SCGB3A1Q96QR1 104 aa6.62□□□□□ -1.35
SHPRH-209ENST00000521977 PYGO1Q9Y3Y4 419 aa6.62□□□□□ -1.35
SHPRH-209ENST00000521977 A0A096LPF7 62 aa6.61□□□□□ -1.35
SHPRH-209ENST00000521977 TRBV6-8A0A0A6YYG3 113 aa6.61□□□□□ -1.35
SHPRH-209ENST00000521977 MRPL23Q16540 153 aaKnown RBP6.61□□□□□ -1.35
SHPRH-209ENST00000521977 LGALS9CQ6DKI2 356 aa6.61□□□□□ -1.35
SHPRH-209ENST00000521977 SH2D6Q7Z4S9 175 aa6.61□□□□□ -1.35
SHPRH-209ENST00000521977 FAM104AQ969W3 186 aa6.61□□□□□ -1.35
SHPRH-209ENST00000521977 TIMM21Q9BVV7 248 aa6.61□□□□□ -1.35
SHPRH-209ENST00000521977 UBE2D4Q9Y2X8 147 aa6.61□□□□□ -1.35
SHPRH-209ENST00000521977 ICOSQ9Y6W8 199 aa6.61□□□□□ -1.35
SHPRH-209ENST00000521977 DYNC2H1Q8NCM8 4307 aaKnown RBP6.6□□□□□ -1.35
SHPRH-209ENST00000521977 TRBV25-1A0A075B6N4 114 aa6.6□□□□□ -1.35
SHPRH-209ENST00000521977 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms