RNA–Protein interactions for RNA: ENST00000521941.1

CTNNA1-231, Transcript of catenin alpha 1, human

TSL 3

Gene CTNNA1, Length 224 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-231	ENST00000521941	HLA-DQA1	P01909	254 aa		5.56	□□□□□ -1.52
CTNNA1-231	ENST00000521941	APCS	P02743	223 aa		5.56	□□□□□ -1.52
CTNNA1-231	ENST00000521941	RAB4A	P20338	218 aa		5.56	□□□□□ -1.52
CTNNA1-231	ENST00000521941	PMCH	P20382	165 aa		5.56	□□□□□ -1.52
CTNNA1-231	ENST00000521941	RPS10	P46783	165 aa	Known RBP	5.56	□□□□□ -1.52
CTNNA1-231	ENST00000521941		Q8N814	137 aa		5.56	□□□□□ -1.52
CTNNA1-231	ENST00000521941	BAALC	Q8WXS3	180 aa		5.56	□□□□□ -1.52
CTNNA1-231	ENST00000521941	C1orf43	Q9BWL3	253 aa		5.56	□□□□□ -1.52
CTNNA1-231	ENST00000521941	IGLV4-60	A0A075B6I1	120 aa		5.55	□□□□□ -1.52
CTNNA1-231	ENST00000521941	IGKV3OR2-268	A0A0C4DH90	116 aa		5.55	□□□□□ -1.52
CTNNA1-231	ENST00000521941		Q0VG73	95 aa		5.55	□□□□□ -1.52
CTNNA1-231	ENST00000521941	ENHO	Q6UWT2	76 aa		5.55	□□□□□ -1.52
CTNNA1-231	ENST00000521941	LINC00269	Q8N2A0	174 aa		5.55	□□□□□ -1.52
CTNNA1-231	ENST00000521941	MAPKAPK5-AS1	Q8N8E1	139 aa		5.55	□□□□□ -1.52
CTNNA1-231	ENST00000521941	FRZB	Q92765	325 aa		5.55	□□□□□ -1.52
CTNNA1-231	ENST00000521941	MRAP2	Q96G30	205 aa		5.55	□□□□□ -1.52
CTNNA1-231	ENST00000521941	ST20	Q9HBF5	79 aa		5.55	□□□□□ -1.52
CTNNA1-231	ENST00000521941	TMEM242	Q9NWH2	141 aa		5.55	□□□□□ -1.52
CTNNA1-231	ENST00000521941	PGPEP1	Q9NXJ5	209 aa		5.55	□□□□□ -1.52
CTNNA1-231	ENST00000521941	IGLV10-54	A0A075B6I4	117 aa		5.54	□□□□□ -1.52
CTNNA1-231	ENST00000521941		F8W036	122 aa		5.54	□□□□□ -1.52
CTNNA1-231	ENST00000521941	HBB	P68871	147 aa		5.54	□□□□□ -1.52
CTNNA1-231	ENST00000521941	PNRC1	Q12796	327 aa	Predicted RBP	5.54	□□□□□ -1.52
CTNNA1-231	ENST00000521941	AMMECR1L	Q6DCA0	310 aa		5.54	□□□□□ -1.52
CTNNA1-231	ENST00000521941	CDPF1	Q6NVV7	123 aa		5.54	□□□□□ -1.52
CTNNA1-231	ENST00000521941	RNASEK	Q6P5S7	137 aa	Known RBP	5.54	□□□□□ -1.52
CTNNA1-231	ENST00000521941	COMMD7	Q86VX2	200 aa		5.54	□□□□□ -1.52
CTNNA1-231	ENST00000521941	C20orf203	Q8NBC4	194 aa		5.54	□□□□□ -1.52
CTNNA1-231	ENST00000521941	TMEM70	Q9BUB7	260 aa		5.54	□□□□□ -1.52
CTNNA1-231	ENST00000521941	COX11	Q9Y6N1	276 aa		5.54	□□□□□ -1.52
CTNNA1-231	ENST00000521941	TRBV6-5	A0A0K0K1A5	114 aa		5.53	□□□□□ -1.52
CTNNA1-231	ENST00000521941		I3L3M4	83 aa		5.53	□□□□□ -1.52
CTNNA1-231	ENST00000521941	PPP1R2P9	O14990	202 aa		5.53	□□□□□ -1.52
CTNNA1-231	ENST00000521941	MT-ND4L	P03901	98 aa		5.53	□□□□□ -1.52
CTNNA1-231	ENST00000521941	ADCYAP1	P18509	176 aa		5.53	□□□□□ -1.52
CTNNA1-231	ENST00000521941	KRTAP10-1	P60331	282 aa		5.53	□□□□□ -1.52
CTNNA1-231	ENST00000521941	HAMP	P81172	84 aa		5.53	□□□□□ -1.52
CTNNA1-231	ENST00000521941	REG3A	Q06141	175 aa		5.53	□□□□□ -1.52
CTNNA1-231	ENST00000521941	MIA	Q16674	131 aa		5.53	□□□□□ -1.52
CTNNA1-231	ENST00000521941	MRPL51	Q4U2R6	128 aa	Known RBP	5.53	□□□□□ -1.52
CTNNA1-231	ENST00000521941	FAM104B	Q5XKR9	115 aa		5.53	□□□□□ -1.52
CTNNA1-231	ENST00000521941		A0A1B0GW15	77 aa		5.52	□□□□□ -1.53
CTNNA1-231	ENST00000521941		A0A1B0GXF2	115 aa		5.52	□□□□□ -1.53
CTNNA1-231	ENST00000521941		D6R8Y8	96 aa		5.52	□□□□□ -1.53
CTNNA1-231	ENST00000521941	TSHB	P01222	138 aa		5.52	□□□□□ -1.53
CTNNA1-231	ENST00000521941	S100A8	P05109	93 aa		5.52	□□□□□ -1.53
CTNNA1-231	ENST00000521941	GCSH	P23434	173 aa		5.52	□□□□□ -1.53
CTNNA1-231	ENST00000521941	FCER1G	P30273	86 aa		5.52	□□□□□ -1.53
CTNNA1-231	ENST00000521941	CKS2	P33552	79 aa		5.52	□□□□□ -1.53
CTNNA1-231	ENST00000521941	NTN5	Q8WTR8	489 aa	Predicted RBP	5.52	□□□□□ -1.53
CTNNA1-231	ENST00000521941	ANAPC16	Q96DE5	110 aa		5.52	□□□□□ -1.53
CTNNA1-231	ENST00000521941	DNAH5	Q8TE73	4624 aa		5.52	□□□□□ -1.53
CTNNA1-231	ENST00000521941	LRP1B	Q9NZR2	4599 aa		5.52	□□□□□ -1.53
CTNNA1-231	ENST00000521941		A0A1B0GUV1	79 aa		5.51	□□□□□ -1.53
CTNNA1-231	ENST00000521941	TMEM218	A2RU14	115 aa		5.51	□□□□□ -1.53
CTNNA1-231	ENST00000521941	USP17L23	D6RBM5	183 aa		5.51	□□□□□ -1.53
CTNNA1-231	ENST00000521941	CDK2AP2	O75956	126 aa		5.51	□□□□□ -1.53
CTNNA1-231	ENST00000521941	FGF6	P10767	208 aa		5.51	□□□□□ -1.53
CTNNA1-231	ENST00000521941	POLR2K	P53803	58 aa	Known RBP	5.51	□□□□□ -1.53
CTNNA1-231	ENST00000521941	SUMO2	P61956	95 aa	Known RBP	5.51	□□□□□ -1.53
CTNNA1-231	ENST00000521941	LINC01620	Q4KN68	170 aa		5.51	□□□□□ -1.53
CTNNA1-231	ENST00000521941	UQCC3	Q6UW78	93 aa		5.51	□□□□□ -1.53
CTNNA1-231	ENST00000521941	NRAC	Q8N912	160 aa		5.51	□□□□□ -1.53
CTNNA1-231	ENST00000521941	BTF3L4	Q96K17	158 aa		5.51	□□□□□ -1.53
CTNNA1-231	ENST00000521941	PRR34	Q9NV39	138 aa		5.51	□□□□□ -1.53
CTNNA1-231	ENST00000521941	TRBV27	A0A0K0K1C4	114 aa		5.5	□□□□□ -1.53
CTNNA1-231	ENST00000521941	C7orf77	A4D0Y5	90 aa		5.5	□□□□□ -1.53
CTNNA1-231	ENST00000521941	PPP1R17	O96001	155 aa		5.5	□□□□□ -1.53
CTNNA1-231	ENST00000521941	NPY	P01303	97 aa		5.5	□□□□□ -1.53
CTNNA1-231	ENST00000521941	ATP5L2	Q7Z4Y8	100 aa		5.5	□□□□□ -1.53
CTNNA1-231	ENST00000521941	TMEM101	Q96IK0	257 aa		5.5	□□□□□ -1.53
CTNNA1-231	ENST00000521941	KIAA1109	Q2LD37	5005 aa		5.5	□□□□□ -1.53
CTNNA1-231	ENST00000521941	LINC00862	A6NCI5	91 aa		5.49	□□□□□ -1.53
CTNNA1-231	ENST00000521941	VCY	O14598	125 aa		5.49	□□□□□ -1.53
CTNNA1-231	ENST00000521941	TNFRSF6B	O95407	300 aa		5.49	□□□□□ -1.53
CTNNA1-231	ENST00000521941	ESD	P10768	282 aa		5.49	□□□□□ -1.53
CTNNA1-231	ENST00000521941	C14orf177	Q52M58	125 aa		5.49	□□□□□ -1.53
CTNNA1-231	ENST00000521941	OR5A1	Q8NGJ0	315 aa		5.49	□□□□□ -1.53
CTNNA1-231	ENST00000521941	KIR2DL4	Q99706	377 aa		5.49	□□□□□ -1.53
CTNNA1-231	ENST00000521941	HERC2	O95714	4834 aa		5.49	□□□□□ -1.53
CTNNA1-231	ENST00000521941	TRAV8-4	A0A0B4J246	113 aa		5.48	□□□□□ -1.53
CTNNA1-231	ENST00000521941	GAGE12H	A6NDE8	117 aa		5.48	□□□□□ -1.53
CTNNA1-231	ENST00000521941		H7C423	109 aa		5.48	□□□□□ -1.53
CTNNA1-231	ENST00000521941	TCAP	O15273	167 aa		5.48	□□□□□ -1.53
CTNNA1-231	ENST00000521941	ZNF25	P17030	456 aa	Predicted RBP	5.48	□□□□□ -1.53
CTNNA1-231	ENST00000521941	RNASE13	Q5GAN3	156 aa	Known RBP	5.48	□□□□□ -1.53
CTNNA1-231	ENST00000521941	DGAT2L7P	Q6IED9	249 aa		5.48	□□□□□ -1.53
CTNNA1-231	ENST00000521941	KRTAP26-1	Q6PEX3	210 aa		5.48	□□□□□ -1.53
CTNNA1-231	ENST00000521941	ORMDL3	Q8N138	153 aa		5.48	□□□□□ -1.53
CTNNA1-231	ENST00000521941	PRELID3A	Q96N28	172 aa		5.48	□□□□□ -1.53
CTNNA1-231	ENST00000521941	SMIM2	Q9BVW6	85 aa		5.48	□□□□□ -1.53
CTNNA1-231	ENST00000521941	SEC11C	Q9BY50	192 aa		5.48	□□□□□ -1.53
CTNNA1-231	ENST00000521941	HSPG2	P98160	4391 aa		5.47	□□□□□ -1.53
CTNNA1-231	ENST00000521941	LOC389332	A0A1B0GUA5	103 aa		5.47	□□□□□ -1.53
CTNNA1-231	ENST00000521941	XG	P55808	180 aa		5.47	□□□□□ -1.53
CTNNA1-231	ENST00000521941	TMEM136	Q6ZRR5	245 aa		5.47	□□□□□ -1.53
CTNNA1-231	ENST00000521941	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	5.47	□□□□□ -1.53
CTNNA1-231	ENST00000521941	C20orf78	Q9BR46	151 aa		5.47	□□□□□ -1.53
CTNNA1-231	ENST00000521941	KRTAP17-1	Q9BYP8	105 aa		5.47	□□□□□ -1.53
CTNNA1-231	ENST00000521941	KRTAP4-5	Q9BYR2	181 aa		5.47	□□□□□ -1.53

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