RNA–Protein interactions for RNA: ENST00000521798.1

SPIDR-215, Transcript of scaffold protein involved in DNA repair, human

TSL 3

Gene SPIDR, Length 647 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-215	ENST00000521798	TCRA	P04437	139 aa		4.65	□□□□□ -1.67
SPIDR-215	ENST00000521798	GPX1	P07203	203 aa		4.65	□□□□□ -1.67
SPIDR-215	ENST00000521798	TPT1	P13693	172 aa	Known RBP	4.65	□□□□□ -1.67
SPIDR-215	ENST00000521798	RNASE4	P34096	147 aa	Known RBP	4.65	□□□□□ -1.67
SPIDR-215	ENST00000521798	MPV17L2	Q567V2	206 aa		4.65	□□□□□ -1.67
SPIDR-215	ENST00000521798	C5orf17	Q8NAS9	161 aa		4.65	□□□□□ -1.67
SPIDR-215	ENST00000521798	TVP23C	Q96ET8	276 aa		4.65	□□□□□ -1.67
SPIDR-215	ENST00000521798	LINC00467	Q9BRT7	94 aa		4.65	□□□□□ -1.67
SPIDR-215	ENST00000521798	MAP1LC3B	Q9GZQ8	125 aa		4.65	□□□□□ -1.67
SPIDR-215	ENST00000521798	EPDR1	Q9UM22	224 aa		4.65	□□□□□ -1.67
SPIDR-215	ENST00000521798	DEFB131B	A0A096LNP1	70 aa		4.64	□□□□□ -1.67
SPIDR-215	ENST00000521798	IGLL5	B9A064	214 aa		4.64	□□□□□ -1.67
SPIDR-215	ENST00000521798	UMAD1	C9J7I0	102 aa		4.64	□□□□□ -1.67
SPIDR-215	ENST00000521798	ZNF861P	O60384	105 aa		4.64	□□□□□ -1.67
SPIDR-215	ENST00000521798	DAD1	P61803	113 aa		4.64	□□□□□ -1.67
SPIDR-215	ENST00000521798	EIF5A	P63241	154 aa	Known RBP	4.64	□□□□□ -1.67
SPIDR-215	ENST00000521798		Q6AWC8	147 aa		4.64	□□□□□ -1.67
SPIDR-215	ENST00000521798	C9orf62	Q8N4C0	152 aa		4.64	□□□□□ -1.67
SPIDR-215	ENST00000521798	FAM213B	Q8TBF2	198 aa		4.64	□□□□□ -1.67
SPIDR-215	ENST00000521798	MBD3L1	Q8WWY6	194 aa		4.64	□□□□□ -1.67
SPIDR-215	ENST00000521798	NOP10	Q9NPE3	64 aa	Known RBP	4.64	□□□□□ -1.67
SPIDR-215	ENST00000521798	TP53TG3	Q9ULZ0	132 aa		4.64	□□□□□ -1.67
SPIDR-215	ENST00000521798	APLN	Q9ULZ1	77 aa		4.64	□□□□□ -1.67
SPIDR-215	ENST00000521798	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	4.64	□□□□□ -1.67
SPIDR-215	ENST00000521798	HECTD4	Q9Y4D8	3996 aa		4.64	□□□□□ -1.67
SPIDR-215	ENST00000521798		A0A1B0GV50	99 aa		4.63	□□□□□ -1.67
SPIDR-215	ENST00000521798		F6UZH7	168 aa		4.63	□□□□□ -1.67
SPIDR-215	ENST00000521798	DEFB130B	P0DP73	79 aa		4.63	□□□□□ -1.67
SPIDR-215	ENST00000521798	DEFB130A	P0DP74	79 aa		4.63	□□□□□ -1.67
SPIDR-215	ENST00000521798	RPS10	P46783	165 aa	Known RBP	4.63	□□□□□ -1.67
SPIDR-215	ENST00000521798	DPPA3	Q6W0C5	159 aa		4.63	□□□□□ -1.67
SPIDR-215	ENST00000521798	SLC51B	Q86UW2	128 aa		4.63	□□□□□ -1.67
SPIDR-215	ENST00000521798	EIF4E3	Q8N5X7	224 aa	Known RBP	4.63	□□□□□ -1.67
SPIDR-215	ENST00000521798	LINC00337	Q8N6G1	96 aa		4.63	□□□□□ -1.67
SPIDR-215	ENST00000521798	CYB561D1	Q8N8Q1	229 aa		4.63	□□□□□ -1.67
SPIDR-215	ENST00000521798	TMEM75	Q8N9X5	138 aa		4.63	□□□□□ -1.67
SPIDR-215	ENST00000521798	SFT2D1	Q8WV19	159 aa		4.63	□□□□□ -1.67
SPIDR-215	ENST00000521798	ARL2-SNX15	V9GYD0	113 aa		4.63	□□□□□ -1.67
SPIDR-215	ENST00000521798	BIRC6	Q9NR09	4857 aa		4.63	□□□□□ -1.67
SPIDR-215	ENST00000521798	DNAH11	Q96DT5	4516 aa		4.62	□□□□□ -1.67
SPIDR-215	ENST00000521798		A0A1B0GXF2	115 aa		4.62	□□□□□ -1.67
SPIDR-215	ENST00000521798	IFNA7	P01567	189 aa		4.62	□□□□□ -1.67
SPIDR-215	ENST00000521798	IGLV2-8	P01709	118 aa		4.62	□□□□□ -1.67
SPIDR-215	ENST00000521798	HTN3	P15516	51 aa		4.62	□□□□□ -1.67
SPIDR-215	ENST00000521798	ATP5G3	P48201	142 aa		4.62	□□□□□ -1.67
SPIDR-215	ENST00000521798	SULT1A2	P50226	295 aa		4.62	□□□□□ -1.67
SPIDR-215	ENST00000521798	RAB5C	P51148	216 aa		4.62	□□□□□ -1.67
SPIDR-215	ENST00000521798	TCL1A	P56279	114 aa		4.62	□□□□□ -1.67
SPIDR-215	ENST00000521798	TCTA	P57738	103 aa		4.62	□□□□□ -1.67
SPIDR-215	ENST00000521798	FLI1	Q01543	452 aa	Predicted RBP	4.62	□□□□□ -1.67
SPIDR-215	ENST00000521798	SMUG1	Q53HV7	270 aa		4.62	□□□□□ -1.67
SPIDR-215	ENST00000521798	IBA57	Q5T440	356 aa	Known RBP	4.62	□□□□□ -1.67
SPIDR-215	ENST00000521798	ZNF680	Q8NEM1	530 aa		4.62	□□□□□ -1.67
SPIDR-215	ENST00000521798	HIST1H2BA	Q96A08	127 aa		4.62	□□□□□ -1.67
SPIDR-215	ENST00000521798	KRTAP4-5	Q9BYR2	181 aa		4.62	□□□□□ -1.67
SPIDR-215	ENST00000521798	NKX6-2	Q9C056	277 aa	Predicted RBP	4.62	□□□□□ -1.67
SPIDR-215	ENST00000521798	TRAV1-1	A0A0B4J248	108 aa		4.61	□□□□□ -1.67
SPIDR-215	ENST00000521798	TRAV21	A0A0B4J279	112 aa		4.61	□□□□□ -1.67
SPIDR-215	ENST00000521798	SPINK4	O60575	86 aa		4.61	□□□□□ -1.67
SPIDR-215	ENST00000521798	LY6G6C	O95867	125 aa		4.61	□□□□□ -1.67
SPIDR-215	ENST00000521798	ZNF80	P51504	273 aa	Predicted RBP	4.61	□□□□□ -1.67
SPIDR-215	ENST00000521798	NKX2-5	P52952	324 aa	Predicted RBP	4.61	□□□□□ -1.67
SPIDR-215	ENST00000521798	CCL20	P78556	96 aa		4.61	□□□□□ -1.67
SPIDR-215	ENST00000521798	TDRG1	Q3Y452	100 aa		4.61	□□□□□ -1.67
SPIDR-215	ENST00000521798	LGALS9C	Q6DKI2	356 aa		4.61	□□□□□ -1.67
SPIDR-215	ENST00000521798	EIF5AL1	Q6IS14	154 aa	Known RBP	4.61	□□□□□ -1.67
SPIDR-215	ENST00000521798		Q6ZTI0	123 aa		4.61	□□□□□ -1.67
SPIDR-215	ENST00000521798	PRNT	Q86SH4	94 aa		4.61	□□□□□ -1.67
SPIDR-215	ENST00000521798		Q86TA4	180 aa		4.61	□□□□□ -1.67
SPIDR-215	ENST00000521798	TCEAL7	Q9BRU2	100 aa		4.61	□□□□□ -1.67
SPIDR-215	ENST00000521798	NDFIP1	Q9BT67	221 aa		4.61	□□□□□ -1.67
SPIDR-215	ENST00000521798	SPANXB1	Q9NS25	103 aa	Predicted RBP	4.61	□□□□□ -1.67
SPIDR-215	ENST00000521798	MUC4	Q99102	2169 aa		4.6	□□□□□ -1.67
SPIDR-215	ENST00000521798	TRGV1	A0A0A0MS02	117 aa		4.6	□□□□□ -1.67
SPIDR-215	ENST00000521798		F5H768	121 aa		4.6	□□□□□ -1.67
SPIDR-215	ENST00000521798	BPY2	O14599	106 aa		4.6	□□□□□ -1.67
SPIDR-215	ENST00000521798	GNRH2	O43555	120 aa		4.6	□□□□□ -1.67
SPIDR-215	ENST00000521798	ATP5G1	P05496	136 aa		4.6	□□□□□ -1.67
SPIDR-215	ENST00000521798	PFN1	P07737	140 aa	Known RBP	4.6	□□□□□ -1.67
SPIDR-215	ENST00000521798	SAPCD1	Q5SSQ6	148 aa		4.6	□□□□□ -1.67
SPIDR-215	ENST00000521798	TRBV6-1	A0A0K0K1D8	114 aa		4.59	□□□□□ -1.67
SPIDR-215	ENST00000521798	APCS	P02743	223 aa		4.59	□□□□□ -1.67
SPIDR-215	ENST00000521798	TYMS	P04818	313 aa		4.59	□□□□□ -1.67
SPIDR-215	ENST00000521798	AKR1C3	P42330	323 aa		4.59	□□□□□ -1.67
SPIDR-215	ENST00000521798	CRIP1	P50238	77 aa		4.59	□□□□□ -1.67
SPIDR-215	ENST00000521798	PKD1	P98161	4303 aa		4.59	□□□□□ -1.67
SPIDR-215	ENST00000521798	DYNC1H1	Q14204	4646 aa	Known RBP	4.59	□□□□□ -1.67
SPIDR-215	ENST00000521798	LGALS9B	Q3B8N2	356 aa		4.59	□□□□□ -1.67
SPIDR-215	ENST00000521798	RNF212	Q495C1	297 aa		4.59	□□□□□ -1.67
SPIDR-215	ENST00000521798	ALKAL2	Q6UX46	152 aa		4.59	□□□□□ -1.67
SPIDR-215	ENST00000521798	NTM-AS1	Q6ZSK4	140 aa		4.59	□□□□□ -1.67
SPIDR-215	ENST00000521798	FMC1	Q96HJ9	113 aa		4.59	□□□□□ -1.67
SPIDR-215	ENST00000521798	MANBAL	Q9NQG1	85 aa		4.59	□□□□□ -1.67
SPIDR-215	ENST00000521798	C8orf17	Q9NRJ1	99 aa		4.59	□□□□□ -1.67
SPIDR-215	ENST00000521798	MRPL16	Q9NX20	251 aa	Known RBP	4.59	□□□□□ -1.67
SPIDR-215	ENST00000521798	GNG13	Q9P2W3	67 aa		4.59	□□□□□ -1.67
SPIDR-215	ENST00000521798	PKHD1	P08F94	4074 aa		4.59	□□□□□ -1.68
SPIDR-215	ENST00000521798	TRGV2	A0A075B6R0	118 aa		4.58	□□□□□ -1.68
SPIDR-215	ENST00000521798	IGKV3D-20	A0A0C4DH25	116 aa		4.58	□□□□□ -1.68
SPIDR-215	ENST00000521798	PANO1	I0J062	215 aa		4.58	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms