RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 TMEM243Q9BU79 118 aa6.31□□□□□ -1.4
CLK4-209ENST00000521621 A0A087WX48 190 aa6.3□□□□□ -1.4
CLK4-209ENST00000521621 ZNF25P17030 456 aaPredicted RBP6.3□□□□□ -1.4
CLK4-209ENST00000521621 HBBP68871 147 aa6.3□□□□□ -1.4
CLK4-209ENST00000521621 COTL1Q14019 142 aa6.3□□□□□ -1.4
CLK4-209ENST00000521621 IGHV3-30P01768 117 aa6.3□□□□□ -1.4
CLK4-209ENST00000521621 IGHV3-33P01772 117 aa6.3□□□□□ -1.4
CLK4-209ENST00000521621 IGHV3-30-3P0DP02 117 aa6.3□□□□□ -1.4
CLK4-209ENST00000521621 IGHV3-30-5P0DP03 117 aa6.3□□□□□ -1.4
CLK4-209ENST00000521621 NRACQ8N912 160 aa6.3□□□□□ -1.4
CLK4-209ENST00000521621 LAMTOR2Q9Y2Q5 125 aa6.3□□□□□ -1.4
CLK4-209ENST00000521621 CARHSP1Q9Y2V2 147 aaKnown RBP6.3□□□□□ -1.4
CLK4-209ENST00000521621 TRAV8-4A0A0B4J246 113 aa6.29□□□□□ -1.4
CLK4-209ENST00000521621 ESDP10768 282 aa6.29□□□□□ -1.4
CLK4-209ENST00000521621 ST20Q9HBF5 79 aa6.29□□□□□ -1.4
CLK4-209ENST00000521621 MRPL52Q86TS9 123 aaKnown RBP6.29□□□□□ -1.4
CLK4-209ENST00000521621 SDHAF1A6NFY7 115 aa6.29□□□□□ -1.4
CLK4-209ENST00000521621 RBX1P62877 108 aa6.29□□□□□ -1.4
CLK4-209ENST00000521621 SMAGPQ0VAQ4 97 aa6.29□□□□□ -1.4
CLK4-209ENST00000521621 ENHOQ6UWT2 76 aa6.29□□□□□ -1.4
CLK4-209ENST00000521621 CHCHD5Q9BSY4 110 aa6.29□□□□□ -1.4
CLK4-209ENST00000521621 TMEM70Q9BUB7 260 aa6.29□□□□□ -1.4
CLK4-209ENST00000521621 CSDC2Q9Y534 153 aaKnown RBP6.29□□□□□ -1.4
CLK4-209ENST00000521621 VCYO14598 125 aa6.28□□□□□ -1.4
CLK4-209ENST00000521621 ADCYAP1P18509 176 aa6.28□□□□□ -1.4
CLK4-209ENST00000521621 MPV17L2Q567V2 206 aa6.28□□□□□ -1.4
CLK4-209ENST00000521621 Q8N814 137 aa6.28□□□□□ -1.4
CLK4-209ENST00000521621 AMTP48728 403 aa6.28□□□□□ -1.4
CLK4-209ENST00000521621 MRPL51Q4U2R6 128 aaKnown RBP6.28□□□□□ -1.4
CLK4-209ENST00000521621 KRTAP26-1Q6PEX3 210 aa6.28□□□□□ -1.4
CLK4-209ENST00000521621 SPATA12Q7Z6I5 190 aa6.28□□□□□ -1.4
CLK4-209ENST00000521621 AMN1Q8IY45 258 aa6.28□□□□□ -1.4
CLK4-209ENST00000521621 RPL39LQ96EH5 51 aaKnown RBP6.28□□□□□ -1.4
CLK4-209ENST00000521621 TIMM21Q9BVV7 248 aa6.28□□□□□ -1.4
CLK4-209ENST00000521621 TRAV26-2A0A0B4J265 109 aa6.27□□□□□ -1.41
CLK4-209ENST00000521621 TSHBP01222 138 aa6.27□□□□□ -1.41
CLK4-209ENST00000521621 SSTP61278 116 aa6.27□□□□□ -1.41
CLK4-209ENST00000521621 C14orf177Q52M58 125 aa6.27□□□□□ -1.41
CLK4-209ENST00000521621 Q8N976 141 aa6.27□□□□□ -1.41
CLK4-209ENST00000521621 BTF3L4Q96K17 158 aa6.27□□□□□ -1.41
CLK4-209ENST00000521621 CCL25O15444 150 aa6.27□□□□□ -1.41
CLK4-209ENST00000521621 APCSP02743 223 aa6.27□□□□□ -1.41
CLK4-209ENST00000521621 COX19Q49B96 90 aa6.27□□□□□ -1.41
CLK4-209ENST00000521621 COMMD7Q86VX2 200 aa6.27□□□□□ -1.41
CLK4-209ENST00000521621 KLK12Q9UKR0 248 aa6.27□□□□□ -1.41
CLK4-209ENST00000521621 K7EMI3 77 aa6.26□□□□□ -1.41
CLK4-209ENST00000521621 SUMO2P61956 95 aaKnown RBP6.26□□□□□ -1.41
CLK4-209ENST00000521621 Q8N3U1 123 aa6.26□□□□□ -1.41
CLK4-209ENST00000521621 C20orf203Q8NBC4 194 aa6.26□□□□□ -1.41
CLK4-209ENST00000521621 PSCAO43653 123 aa6.26□□□□□ -1.41
CLK4-209ENST00000521621 CRPP02741 224 aa6.26□□□□□ -1.41
CLK4-209ENST00000521621 PMCHP20382 165 aa6.26□□□□□ -1.41
CLK4-209ENST00000521621 KRTAP10-2P60368 255 aa6.26□□□□□ -1.41
CLK4-209ENST00000521621 RHEBQ15382 184 aa6.26□□□□□ -1.41
CLK4-209ENST00000521621 C16orf90A8MZG2 172 aa6.25□□□□□ -1.41
CLK4-209ENST00000521621 TMEM262E9PQX1 116 aa6.25□□□□□ -1.41
CLK4-209ENST00000521621 UBE2L6O14933 153 aa6.25□□□□□ -1.41
CLK4-209ENST00000521621 NPSP0C0P6 89 aa6.25□□□□□ -1.41
CLK4-209ENST00000521621 GAGE6Q13070 117 aa6.25□□□□□ -1.41
CLK4-209ENST00000521621 C1orf43Q9BWL3 253 aa6.25□□□□□ -1.41
CLK4-209ENST00000521621 ANGP03950 147 aaKnown RBP6.24□□□□□ -1.41
CLK4-209ENST00000521621 RPS10P46783 165 aaKnown RBP6.24□□□□□ -1.41
CLK4-209ENST00000521621 MAPKAPK5-AS1Q8N8E1 139 aa6.24□□□□□ -1.41
CLK4-209ENST00000521621 REG3AQ06141 175 aa6.24□□□□□ -1.41
CLK4-209ENST00000521621 ORMDL3Q8N138 153 aa6.24□□□□□ -1.41
CLK4-209ENST00000521621 UBE2WQ96B02 151 aa6.24□□□□□ -1.41
CLK4-209ENST00000521621 GAS8-AS1O95177 125 aa6.23□□□□□ -1.41
CLK4-209ENST00000521621 TNFRSF6BO95407 300 aa6.23□□□□□ -1.41
CLK4-209ENST00000521621 CKS2P33552 79 aa6.23□□□□□ -1.41
CLK4-209ENST00000521621 CLRN3Q8NCR9 226 aa6.23□□□□□ -1.41
CLK4-209ENST00000521621 TMEM18Q96B42 140 aa6.23□□□□□ -1.41
CLK4-209ENST00000521621 KIR2DL4Q99706 377 aa6.23□□□□□ -1.41
CLK4-209ENST00000521621 Q9HAA7 133 aa6.23□□□□□ -1.41
CLK4-209ENST00000521621 OR5A1Q8NGJ0 315 aa6.23□□□□□ -1.41
CLK4-209ENST00000521621 SMIM2Q9BVW6 85 aa6.23□□□□□ -1.41
CLK4-209ENST00000521621 FGF6P10767 208 aa6.23□□□□□ -1.41
CLK4-209ENST00000521621 CAMPP49913 170 aa6.23□□□□□ -1.41
CLK4-209ENST00000521621 DGAT2L7PQ6IED9 249 aa6.23□□□□□ -1.41
CLK4-209ENST00000521621 LINC00269Q8N2A0 174 aa6.23□□□□□ -1.41
CLK4-209ENST00000521621 IGLV4-60A0A075B6I1 120 aa6.22□□□□□ -1.41
CLK4-209ENST00000521621 C7orf77A4D0Y5 90 aa6.22□□□□□ -1.41
CLK4-209ENST00000521621 GCSHP23434 173 aa6.22□□□□□ -1.41
CLK4-209ENST00000521621 MRPL54Q6P161 138 aaKnown RBP6.22□□□□□ -1.41
CLK4-209ENST00000521621 TMEM101Q96IK0 257 aa6.22□□□□□ -1.41
CLK4-209ENST00000521621 IGKV2D-24A0A075B6R9 120 aa6.22□□□□□ -1.41
CLK4-209ENST00000521621 LINC01546A6NGU7 62 aa6.22□□□□□ -1.41
CLK4-209ENST00000521621 MRPS36P82909 103 aaKnown RBP6.22□□□□□ -1.41
CLK4-209ENST00000521621 GNB1LQ9BYB4 327 aa6.22□□□□□ -1.41
CLK4-209ENST00000521621 HERC2O95714 4834 aa6.22□□□□□ -1.41
CLK4-209ENST00000521621 PKHD1P08F94 4074 aa6.22□□□□□ -1.41
CLK4-209ENST00000521621 DNAH5Q8TE73 4624 aa6.21□□□□□ -1.41
CLK4-209ENST00000521621 D6R8Y8 96 aa6.21□□□□□ -1.42
CLK4-209ENST00000521621 TMEM136Q6ZRR5 245 aa6.21□□□□□ -1.42
CLK4-209ENST00000521621 Q6ZSA8 131 aa6.21□□□□□ -1.42
CLK4-209ENST00000521621 CDC42SE2Q9NRR3 84 aa6.21□□□□□ -1.42
CLK4-209ENST00000521621 PYGO1Q9Y3Y4 419 aa6.21□□□□□ -1.42
CLK4-209ENST00000521621 S100PP25815 95 aa6.21□□□□□ -1.42
CLK4-209ENST00000521621 SPANXA1Q9NS26 97 aa6.21□□□□□ -1.42
CLK4-209ENST00000521621 UBE2D4Q9Y2X8 147 aa6.21□□□□□ -1.42
CLK4-209ENST00000521621 DNAH8Q96JB1 4490 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms