RNA–Protein interactions for RNA: ENST00000521588.3

R3HCC1-207, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 2

Gene R3HCC1, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-207ENST00000521588 FOXA3P55318 350 aaPredicted RBP12.54□□□□□ -0.4
R3HCC1-207ENST00000521588 REG3AQ06141 175 aa12.54□□□□□ -0.4
R3HCC1-207ENST00000521588 SCXQ7RTU7 201 aa12.54□□□□□ -0.4
R3HCC1-207ENST00000521588 DEFB104AQ8WTQ1 72 aa12.54□□□□□ -0.4
R3HCC1-207ENST00000521588 CHAC1Q9BUX1 264 aa12.54□□□□□ -0.4
R3HCC1-207ENST00000521588 IGLV4-60A0A075B6I1 120 aa12.53□□□□□ -0.4
R3HCC1-207ENST00000521588 TRAV26-2A0A0B4J265 109 aa12.53□□□□□ -0.4
R3HCC1-207ENST00000521588 A8MWL6 223 aa12.53□□□□□ -0.4
R3HCC1-207ENST00000521588 COTL1Q14019 142 aa12.53□□□□□ -0.4
R3HCC1-207ENST00000521588 CT83Q5H943 113 aa12.53□□□□□ -0.4
R3HCC1-207ENST00000521588 LINC00528Q8N1L1 170 aa12.53□□□□□ -0.4
R3HCC1-207ENST00000521588 GFRA4Q9GZZ7 299 aa12.53□□□□□ -0.4
R3HCC1-207ENST00000521588 TRAV8-4A0A0B4J246 113 aa12.52□□□□□ -0.41
R3HCC1-207ENST00000521588 FAM210AQ96ND0 272 aa12.52□□□□□ -0.41
R3HCC1-207ENST00000521588 EIF5A2Q9GZV4 153 aaKnown RBP12.52□□□□□ -0.41
R3HCC1-207ENST00000521588 A0A1B0GVG6 124 aa12.51□□□□□ -0.41
R3HCC1-207ENST00000521588 CEBPGP53567 150 aa12.51□□□□□ -0.41
R3HCC1-207ENST00000521588 DGAT2L7PQ6IED9 249 aa12.51□□□□□ -0.41
R3HCC1-207ENST00000521588 SMIM15Q7Z3B0 74 aa12.51□□□□□ -0.41
R3HCC1-207ENST00000521588 IGLV10-54A0A075B6I4 117 aa12.5□□□□□ -0.41
R3HCC1-207ENST00000521588 PLA2G1BP04054 148 aaKnown RBP12.5□□□□□ -0.41
R3HCC1-207ENST00000521588 SRP19P09132 144 aaKnown RBP12.5□□□□□ -0.41
R3HCC1-207ENST00000521588 AMTP48728 403 aa12.5□□□□□ -0.41
R3HCC1-207ENST00000521588 TEX261Q6UWH6 196 aa12.5□□□□□ -0.41
R3HCC1-207ENST00000521588 LINC01551Q86U37 167 aa12.5□□□□□ -0.41
R3HCC1-207ENST00000521588 CIRBP-AS1Q8TBR5 109 aa12.5□□□□□ -0.41
R3HCC1-207ENST00000521588 RPL39LQ96EH5 51 aaKnown RBP12.5□□□□□ -0.41
R3HCC1-207ENST00000521588 SMIM7Q9BQ49 75 aa12.5□□□□□ -0.41
R3HCC1-207ENST00000521588 C9orf163Q8N9P6 203 aa12.49□□□□□ -0.41
R3HCC1-207ENST00000521588 UBE2L6O14933 153 aa12.48□□□□□ -0.41
R3HCC1-207ENST00000521588 CLRN3Q8NCR9 226 aa12.48□□□□□ -0.41
R3HCC1-207ENST00000521588 OSTCQ9NRP0 149 aa12.48□□□□□ -0.41
R3HCC1-207ENST00000521588 ZNF727A8MUV8 499 aa12.47□□□□□ -0.41
R3HCC1-207ENST00000521588 NCR2O95944 276 aa12.47□□□□□ -0.41
R3HCC1-207ENST00000521588 TSKUQ8WUA8 353 aa12.47□□□□□ -0.41
R3HCC1-207ENST00000521588 TRBV6-5A0A0K0K1A5 114 aa12.46□□□□□ -0.41
R3HCC1-207ENST00000521588 FAM231BA6NCW3 169 aa12.46□□□□□ -0.41
R3HCC1-207ENST00000521588 SDHAF1A6NFY7 115 aa12.46□□□□□ -0.41
R3HCC1-207ENST00000521588 KRTAP10-4P60372 401 aaPredicted RBP12.45□□□□□ -0.42
R3HCC1-207ENST00000521588 A0A1B0GUT8 65 aa12.44□□□□□ -0.42
R3HCC1-207ENST00000521588 HIGD1CA8MV81 97 aa12.44□□□□□ -0.42
R3HCC1-207ENST00000521588 H7C423 109 aa12.44□□□□□ -0.42
R3HCC1-207ENST00000521588 TMEM191AQ9H0A3 160 aa12.44□□□□□ -0.42
R3HCC1-207ENST00000521588 GAS8-AS1O95177 125 aa12.43□□□□□ -0.42
R3HCC1-207ENST00000521588 CNBPP62633 177 aaKnown RBP12.43□□□□□ -0.42
R3HCC1-207ENST00000521588 SDIM1Q6ZPB5 146 aa12.43□□□□□ -0.42
R3HCC1-207ENST00000521588 BORCS7Q96B45 105 aa12.43□□□□□ -0.42
R3HCC1-207ENST00000521588 LRP1Q07954 4544 aaKnown RBP12.42□□□□□ -0.42
R3HCC1-207ENST00000521588 I3L3M4 83 aa12.42□□□□□ -0.42
R3HCC1-207ENST00000521588 APCSP02743 223 aa12.42□□□□□ -0.42
R3HCC1-207ENST00000521588 RNF185Q96GF1 192 aa12.42□□□□□ -0.42
R3HCC1-207ENST00000521588 V9GYV3 84 aa12.42□□□□□ -0.42
R3HCC1-207ENST00000521588 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.41□□□□□ -0.42
R3HCC1-207ENST00000521588 IGKV2-29A2NJV5 120 aaPredicted RBP12.41□□□□□ -0.42
R3HCC1-207ENST00000521588 SLPIP03973 132 aa12.41□□□□□ -0.42
R3HCC1-207ENST00000521588 RAB4AP20338 218 aa12.41□□□□□ -0.42
R3HCC1-207ENST00000521588 TMEM241Q24JQ0 296 aa12.41□□□□□ -0.42
R3HCC1-207ENST00000521588 FAM74A3Q4VXF1 159 aa12.41□□□□□ -0.42
R3HCC1-207ENST00000521588 hDV102S1A0JD36 115 aa12.4□□□□□ -0.42
R3HCC1-207ENST00000521588 C9JQL5 133 aa12.4□□□□□ -0.42
R3HCC1-207ENST00000521588 FGF6P10767 208 aa12.4□□□□□ -0.42
R3HCC1-207ENST00000521588 PMCHP20382 165 aa12.4□□□□□ -0.42
R3HCC1-207ENST00000521588 POLR2KP53803 58 aaKnown RBP12.4□□□□□ -0.42
R3HCC1-207ENST00000521588 AMMECR1LQ6DCA0 310 aa12.4□□□□□ -0.42
R3HCC1-207ENST00000521588 ISOC2Q96AB3 205 aa12.4□□□□□ -0.42
R3HCC1-207ENST00000521588 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.4□□□□□ -0.42
R3HCC1-207ENST00000521588 PKHD1L1Q86WI1 4243 aa12.4□□□□□ -0.42
R3HCC1-207ENST00000521588 FAT3Q8TDW7 4589 aa12.39□□□□□ -0.43
R3HCC1-207ENST00000521588 GAGE12HA6NDE8 117 aa12.39□□□□□ -0.43
R3HCC1-207ENST00000521588 PANO1I0J062 215 aa12.39□□□□□ -0.43
R3HCC1-207ENST00000521588 ESDP10768 282 aa12.39□□□□□ -0.43
R3HCC1-207ENST00000521588 RPL23P62829 140 aaKnown RBP12.39□□□□□ -0.43
R3HCC1-207ENST00000521588 RNASEKQ6P5S7 137 aaKnown RBP12.39□□□□□ -0.43
R3HCC1-207ENST00000521588 NUP35Q8NFH5 326 aa12.39□□□□□ -0.43
R3HCC1-207ENST00000521588 ST20Q9HBF5 79 aa12.39□□□□□ -0.43
R3HCC1-207ENST00000521588 TSHBP01222 138 aa12.38□□□□□ -0.43
R3HCC1-207ENST00000521588 RPS10P46783 165 aaKnown RBP12.38□□□□□ -0.43
R3HCC1-207ENST00000521588 C15orf56Q8N910 161 aa12.38□□□□□ -0.43
R3HCC1-207ENST00000521588 MRAP2Q96G30 205 aa12.38□□□□□ -0.43
R3HCC1-207ENST00000521588 IGKV3OR2-268A0A0C4DH90 116 aa12.37□□□□□ -0.43
R3HCC1-207ENST00000521588 ZNF25P17030 456 aaPredicted RBP12.37□□□□□ -0.43
R3HCC1-207ENST00000521588 RIGQ13278 110 aa12.37□□□□□ -0.43
R3HCC1-207ENST00000521588 AMN1Q8IY45 258 aa12.37□□□□□ -0.43
R3HCC1-207ENST00000521588 CHCHD10Q8WYQ3 142 aaPredicted RBP12.37□□□□□ -0.43
R3HCC1-207ENST00000521588 AP5S1Q9NUS5 200 aa12.37□□□□□ -0.43
R3HCC1-207ENST00000521588 TRBV27A0A0K0K1C4 114 aa12.36□□□□□ -0.43
R3HCC1-207ENST00000521588 KRTAP29-1A8MX34 341 aaPredicted RBP12.36□□□□□ -0.43
R3HCC1-207ENST00000521588 SRSF3P84103 164 aaKnown RBP12.36□□□□□ -0.43
R3HCC1-207ENST00000521588 CIRBPQ14011 172 aaKnown RBP12.36□□□□□ -0.43
R3HCC1-207ENST00000521588 CFAP161Q6P656 301 aa12.36□□□□□ -0.43
R3HCC1-207ENST00000521588 TMEM242Q9NWH2 141 aa12.36□□□□□ -0.43
R3HCC1-207ENST00000521588 OR5A1Q8NGJ0 315 aa12.35□□□□□ -0.43
R3HCC1-207ENST00000521588 NAT8Q9UHE5 227 aa12.35□□□□□ -0.43
R3HCC1-207ENST00000521588 NAT8BQ9UHF3 227 aa12.35□□□□□ -0.43
R3HCC1-207ENST00000521588 IGHV3-64A0A075B6Q5 118 aa12.34□□□□□ -0.43
R3HCC1-207ENST00000521588 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.34□□□□□ -0.43
R3HCC1-207ENST00000521588 SMDT1Q9H4I9 107 aa12.34□□□□□ -0.43
R3HCC1-207ENST00000521588 SMIM27A0A1W2PRY6 76 aa12.33□□□□□ -0.44
R3HCC1-207ENST00000521588 J3QL48 77 aa12.33□□□□□ -0.44
R3HCC1-207ENST00000521588 PEA15Q15121 130 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms