RNA–Protein interactions for RNA: ENST00000520991.3

CLN8-205, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5 BASIC

Gene CLN8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-205ENST00000520991 SMIM15Q7Z3B0 74 aa10.25□□□□□ -0.77
CLN8-205ENST00000520991 AKAP14Q86UN6 197 aa10.25□□□□□ -0.77
CLN8-205ENST00000520991 IGLV4-60A0A075B6I1 120 aa10.24□□□□□ -0.77
CLN8-205ENST00000520991 TRAV8-4A0A0B4J246 113 aa10.24□□□□□ -0.77
CLN8-205ENST00000520991 CLRN3Q8NCR9 226 aa10.24□□□□□ -0.77
CLN8-205ENST00000520991 TRAV26-2A0A0B4J265 109 aa10.23□□□□□ -0.77
CLN8-205ENST00000520991 BLOC1S1P78537 153 aa10.23□□□□□ -0.77
CLN8-205ENST00000520991 ALKAL2Q6UX46 152 aa10.23□□□□□ -0.77
CLN8-205ENST00000520991 Q6ZNX1 250 aa10.23□□□□□ -0.77
CLN8-205ENST00000520991 C9orf163Q8N9P6 203 aa10.23□□□□□ -0.77
CLN8-205ENST00000520991 hDV102S1A0JD36 115 aa10.22□□□□□ -0.77
CLN8-205ENST00000520991 TMEM250H0YL14 139 aa10.22□□□□□ -0.77
CLN8-205ENST00000520991 CEBPGP53567 150 aa10.22□□□□□ -0.77
CLN8-205ENST00000520991 GATD1Q8NB37 220 aa10.22□□□□□ -0.77
CLN8-205ENST00000520991 GFRA4Q9GZZ7 299 aa10.22□□□□□ -0.77
CLN8-205ENST00000520991 hCG_2014768A0A024R1R8 64 aa10.21□□□□□ -0.78
CLN8-205ENST00000520991 KRTAP29-1A8MX34 341 aaPredicted RBP10.21□□□□□ -0.78
CLN8-205ENST00000520991 GATCO43716 136 aaKnown RBP10.21□□□□□ -0.78
CLN8-205ENST00000520991 GTSF1Q8WW33 167 aa10.21□□□□□ -0.78
CLN8-205ENST00000520991 AP5S1Q9NUS5 200 aa10.2□□□□□ -0.78
CLN8-205ENST00000520991 A8MWL6 223 aa10.19□□□□□ -0.78
CLN8-205ENST00000520991 KRTAP10-4P60372 401 aaPredicted RBP10.19□□□□□ -0.78
CLN8-205ENST00000520991 RPL37AP61513 92 aaKnown RBP10.19□□□□□ -0.78
CLN8-205ENST00000520991 TEX261Q6UWH6 196 aa10.19□□□□□ -0.78
CLN8-205ENST00000520991 RPL39LQ96EH5 51 aaKnown RBP10.19□□□□□ -0.78
CLN8-205ENST00000520991 IGKV3OR2-268A0A0C4DH90 116 aa10.18□□□□□ -0.78
CLN8-205ENST00000520991 FOXA3P55318 350 aaPredicted RBP10.18□□□□□ -0.78
CLN8-205ENST00000520991 CNBPP62633 177 aaKnown RBP10.18□□□□□ -0.78
CLN8-205ENST00000520991 AMMECR1LQ6DCA0 310 aa10.18□□□□□ -0.78
CLN8-205ENST00000520991 FAM231DQ6ZW35 169 aa10.18□□□□□ -0.78
CLN8-205ENST00000520991 BORCS7Q96B45 105 aa10.18□□□□□ -0.78
CLN8-205ENST00000520991 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.18□□□□□ -0.78
CLN8-205ENST00000520991 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.17□□□□□ -0.78
CLN8-205ENST00000520991 NCR2O95944 276 aa10.17□□□□□ -0.78
CLN8-205ENST00000520991 APCSP02743 223 aa10.17□□□□□ -0.78
CLN8-205ENST00000520991 SDIM1Q6ZPB5 146 aa10.17□□□□□ -0.78
CLN8-205ENST00000520991 EIF5A2Q9GZV4 153 aaKnown RBP10.17□□□□□ -0.78
CLN8-205ENST00000520991 GAGE12HA6NDE8 117 aa10.16□□□□□ -0.78
CLN8-205ENST00000520991 SDHAF1A6NFY7 115 aa10.16□□□□□ -0.78
CLN8-205ENST00000520991 CT83Q5H943 113 aa10.16□□□□□ -0.78
CLN8-205ENST00000520991 RNASEKQ6P5S7 137 aaKnown RBP10.16□□□□□ -0.78
CLN8-205ENST00000520991 LYPD6BQ8NI32 183 aa10.16□□□□□ -0.78
CLN8-205ENST00000520991 SMIM7Q9BQ49 75 aa10.16□□□□□ -0.78
CLN8-205ENST00000520991 IGHV3-64A0A075B6Q5 118 aa10.15□□□□□ -0.78
CLN8-205ENST00000520991 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.15□□□□□ -0.78
CLN8-205ENST00000520991 IGKV2-29A2NJV5 120 aaPredicted RBP10.15□□□□□ -0.78
CLN8-205ENST00000520991 PANO1I0J062 215 aa10.15□□□□□ -0.78
CLN8-205ENST00000520991 H7C423 109 aa10.14□□□□□ -0.79
CLN8-205ENST00000520991 CFAP161Q6P656 301 aa10.14□□□□□ -0.79
CLN8-205ENST00000520991 DPH3Q96FX2 82 aa10.14□□□□□ -0.79
CLN8-205ENST00000520991 I3L3M4 83 aa10.13□□□□□ -0.79
CLN8-205ENST00000520991 FGF6P10767 208 aa10.13□□□□□ -0.79
CLN8-205ENST00000520991 PMCHP20382 165 aa10.13□□□□□ -0.79
CLN8-205ENST00000520991 LRP1Q07954 4544 aaKnown RBP10.13□□□□□ -0.79
CLN8-205ENST00000520991 A0A1B0GUT8 65 aa10.12□□□□□ -0.79
CLN8-205ENST00000520991 ZNF727A8MUV8 499 aa10.12□□□□□ -0.79
CLN8-205ENST00000520991 HIGD1CA8MV81 97 aa10.12□□□□□ -0.79
CLN8-205ENST00000520991 OXTP01178 125 aa10.12□□□□□ -0.79
CLN8-205ENST00000520991 SLPIP03973 132 aa10.12□□□□□ -0.79
CLN8-205ENST00000520991 LINC01551Q86U37 167 aa10.12□□□□□ -0.79
CLN8-205ENST00000520991 C15orf56Q8N910 161 aa10.12□□□□□ -0.79
CLN8-205ENST00000520991 TSKUQ8WUA8 353 aa10.12□□□□□ -0.79
CLN8-205ENST00000520991 CHCHD10Q8WYQ3 142 aaPredicted RBP10.12□□□□□ -0.79
CLN8-205ENST00000520991 TRBV6-5A0A0K0K1A5 114 aa10.11□□□□□ -0.79
CLN8-205ENST00000520991 ZNF25P17030 456 aaPredicted RBP10.11□□□□□ -0.79
CLN8-205ENST00000520991 TMEM101Q96IK0 257 aa10.11□□□□□ -0.79
CLN8-205ENST00000520991 BTF3L4Q96K17 158 aa10.11□□□□□ -0.79
CLN8-205ENST00000520991 FAM210AQ96ND0 272 aa10.11□□□□□ -0.79
CLN8-205ENST00000520991 ST20Q9HBF5 79 aa10.11□□□□□ -0.79
CLN8-205ENST00000520991 PKHD1L1Q86WI1 4243 aa10.11□□□□□ -0.79
CLN8-205ENST00000520991 NDUFS6O75380 124 aaKnown RBP10.1□□□□□ -0.79
CLN8-205ENST00000520991 CHTF8P0CG12 524 aa10.1□□□□□ -0.79
CLN8-205ENST00000520991 CIRBPQ14011 172 aaKnown RBP10.1□□□□□ -0.79
CLN8-205ENST00000520991 HIGD2BQ4VC39 106 aa10.1□□□□□ -0.79
CLN8-205ENST00000520991 TMEM191AQ9H0A3 160 aa10.1□□□□□ -0.79
CLN8-205ENST00000520991 OSTCQ9NRP0 149 aa10.1□□□□□ -0.79
CLN8-205ENST00000520991 FAT3Q8TDW7 4589 aa10.1□□□□□ -0.79
CLN8-205ENST00000520991 MRAP2Q96G30 205 aa10.09□□□□□ -0.79
CLN8-205ENST00000520991 RNF185Q96GF1 192 aa10.09□□□□□ -0.79
CLN8-205ENST00000520991 TMEM242Q9NWH2 141 aa10.09□□□□□ -0.79
CLN8-205ENST00000520991 FAM231BA6NCW3 169 aa10.08□□□□□ -0.8
CLN8-205ENST00000520991 GAS8-AS1O95177 125 aa10.08□□□□□ -0.8
CLN8-205ENST00000520991 TSHBP01222 138 aa10.08□□□□□ -0.8
CLN8-205ENST00000520991 SRP19P09132 144 aaKnown RBP10.08□□□□□ -0.8
CLN8-205ENST00000520991 RPS10P46783 165 aaKnown RBP10.08□□□□□ -0.8
CLN8-205ENST00000520991 OR5A1Q8NGJ0 315 aa10.08□□□□□ -0.8
CLN8-205ENST00000520991 SPACA4Q8TDM5 124 aa10.08□□□□□ -0.8
CLN8-205ENST00000520991 A0A087WYN8 130 aa10.07□□□□□ -0.8
CLN8-205ENST00000520991 XCL1P47992 114 aa10.07□□□□□ -0.8
CLN8-205ENST00000520991 HNRNPA3P51991 378 aaKnown RBP10.07□□□□□ -0.8
CLN8-205ENST00000520991 RIGQ13278 110 aa10.07□□□□□ -0.8
CLN8-205ENST00000520991 AMN1Q8IY45 258 aa10.07□□□□□ -0.8
CLN8-205ENST00000520991 ESDP10768 282 aa10.07□□□□□ -0.8
CLN8-205ENST00000520991 RAB4AP20338 218 aa10.07□□□□□ -0.8
CLN8-205ENST00000520991 COX6A2Q02221 97 aa10.07□□□□□ -0.8
CLN8-205ENST00000520991 FOXI1Q12951 378 aa10.07□□□□□ -0.8
CLN8-205ENST00000520991 GVQW2A0A096LPI5 108 aaPredicted RBP10.06□□□□□ -0.8
CLN8-205ENST00000520991 CCL25O15444 150 aa10.06□□□□□ -0.8
CLN8-205ENST00000520991 SERTAD4-AS1Q5TG53 156 aa10.06□□□□□ -0.8
CLN8-205ENST00000520991 V9GYV3 84 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms