RNA–Protein interactions for RNA: ENST00000520880.1

CTHRC1-204, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 4 BASIC

Gene CTHRC1, Length 560 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-204ENST00000520880 RAB4AP20338 218 aa2.47□□□□□ -2.01
CTHRC1-204ENST00000520880 RNASE4P34096 147 aaKnown RBP2.47□□□□□ -2.01
CTHRC1-204ENST00000520880 IFI27P40305 119 aaPredicted RBP2.47□□□□□ -2.01
CTHRC1-204ENST00000520880 LEPP41159 167 aa2.47□□□□□ -2.01
CTHRC1-204ENST00000520880 ASIPP42127 132 aa2.47□□□□□ -2.01
CTHRC1-204ENST00000520880 SNRPD3P62318 126 aaKnown RBP2.47□□□□□ -2.01
CTHRC1-204ENST00000520880 CACNG7P62955 275 aa2.47□□□□□ -2.01
CTHRC1-204ENST00000520880 TDRG1Q3Y452 100 aa2.47□□□□□ -2.01
CTHRC1-204ENST00000520880 PSMG4Q5JS54 123 aa2.47□□□□□ -2.01
CTHRC1-204ENST00000520880 AMTNQ6UX39 209 aa2.47□□□□□ -2.01
CTHRC1-204ENST00000520880 LINC00173Q6ZV60 143 aa2.47□□□□□ -2.01
CTHRC1-204ENST00000520880 SPATA12Q7Z6I5 190 aa2.47□□□□□ -2.01
CTHRC1-204ENST00000520880 ORMDL3Q8N138 153 aa2.47□□□□□ -2.01
CTHRC1-204ENST00000520880 OR11H1Q8NG94 326 aa2.47□□□□□ -2.01
CTHRC1-204ENST00000520880 OR9G4Q8NGQ1 327 aa2.47□□□□□ -2.01
CTHRC1-204ENST00000520880 OR1N2Q8NGR9 330 aa2.47□□□□□ -2.01
CTHRC1-204ENST00000520880 DLX4Q92988 240 aaPredicted RBP2.47□□□□□ -2.01
CTHRC1-204ENST00000520880 PRELID3AQ96N28 172 aa2.47□□□□□ -2.01
CTHRC1-204ENST00000520880 SMR3AQ99954 134 aa2.47□□□□□ -2.01
CTHRC1-204ENST00000520880 C16orf95Q9H693 158 aa2.47□□□□□ -2.01
CTHRC1-204ENST00000520880 SIGLEC8Q9NYZ4 499 aa2.47□□□□□ -2.01
CTHRC1-204ENST00000520880 HELZ2Q9BYK8 2649 aaKnown RBP2.46□□□□□ -2.02
CTHRC1-204ENST00000520880 ITPR2Q14571 2701 aa2.46□□□□□ -2.02
CTHRC1-204ENST00000520880 SONP18583 2426 aaKnown RBP2.46□□□□□ -2.02
CTHRC1-204ENST00000520880 IGLV2-18A0A075B6J9 118 aa2.46□□□□□ -2.02
CTHRC1-204ENST00000520880 TRAV12-2A0A075B6T6 113 aa2.46□□□□□ -2.02
CTHRC1-204ENST00000520880 TRAV26-2A0A0B4J265 109 aa2.46□□□□□ -2.02
CTHRC1-204ENST00000520880 RBMY1BA6NDE4 496 aaKnown RBP2.46□□□□□ -2.02
CTHRC1-204ENST00000520880 RBMY1EA6NEQ0 496 aaKnown RBP2.46□□□□□ -2.02
CTHRC1-204ENST00000520880 LINC01546A6NGU7 62 aa2.46□□□□□ -2.02
CTHRC1-204ENST00000520880 CRXO43186 299 aaPredicted RBP2.46□□□□□ -2.02
CTHRC1-204ENST00000520880 GNRH2O43555 120 aa2.46□□□□□ -2.02
CTHRC1-204ENST00000520880 NDUFA7O95182 113 aa2.46□□□□□ -2.02
CTHRC1-204ENST00000520880 PPBPP02775 128 aa2.46□□□□□ -2.02
CTHRC1-204ENST00000520880 RBMY1DP0C7P1 496 aaKnown RBP2.46□□□□□ -2.02
CTHRC1-204ENST00000520880 HLA-DRB4P13762 266 aa2.46□□□□□ -2.02
CTHRC1-204ENST00000520880 EVI2AP22794 236 aa2.46□□□□□ -2.02
CTHRC1-204ENST00000520880 DDTP30046 118 aa2.46□□□□□ -2.02
CTHRC1-204ENST00000520880 CKS2P33552 79 aa2.46□□□□□ -2.02
CTHRC1-204ENST00000520880 LINC00315P59091 139 aa2.46□□□□□ -2.02
CTHRC1-204ENST00000520880 CTAG1AP78358 180 aa2.46□□□□□ -2.02
CTHRC1-204ENST00000520880 SPINK13Q1W4C9 94 aa2.46□□□□□ -2.02
CTHRC1-204ENST00000520880 SPANXN1Q5VSR9 72 aa2.46□□□□□ -2.02
CTHRC1-204ENST00000520880 FOXI2Q6ZQN5 318 aa2.46□□□□□ -2.02
CTHRC1-204ENST00000520880 FA2HQ7L5A8 372 aa2.46□□□□□ -2.02
CTHRC1-204ENST00000520880 TMEM61Q8N0U2 210 aa2.46□□□□□ -2.02
CTHRC1-204ENST00000520880 C20orf144Q9BQM9 153 aa2.46□□□□□ -2.02
CTHRC1-204ENST00000520880 VAMP8Q9BV40 100 aa2.46□□□□□ -2.02
CTHRC1-204ENST00000520880 MAP1LC3AQ9H492 121 aa2.46□□□□□ -2.02
CTHRC1-204ENST00000520880 LAMTOR2Q9Y2Q5 125 aa2.46□□□□□ -2.02
CTHRC1-204ENST00000520880 TIMM8BQ9Y5J9 83 aaPredicted RBP2.46□□□□□ -2.02
CTHRC1-204ENST00000520880 HLA-DRB4X5D2U9 266 aa2.46□□□□□ -2.02
CTHRC1-204ENST00000520880 TLN2Q9Y4G6 2542 aa2.45□□□□□ -2.02
CTHRC1-204ENST00000520880 UNC79Q9P2D8 2635 aa2.45□□□□□ -2.02
CTHRC1-204ENST00000520880 TRAV12-3A0A0B4J271 114 aa2.45□□□□□ -2.02
CTHRC1-204ENST00000520880 A0A0U1RRA0 63 aa2.45□□□□□ -2.02
CTHRC1-204ENST00000520880 LOC389332A0A1B0GUA5 103 aa2.45□□□□□ -2.02
CTHRC1-204ENST00000520880 KNCNA6PVL3 124 aa2.45□□□□□ -2.02
CTHRC1-204ENST00000520880 H3BMM0 161 aa2.45□□□□□ -2.02
CTHRC1-204ENST00000520880 SYS1-DBNDD2H3BUS1 97 aa2.45□□□□□ -2.02
CTHRC1-204ENST00000520880 M0R381 172 aa2.45□□□□□ -2.02
CTHRC1-204ENST00000520880 TCF21O43680 179 aa2.45□□□□□ -2.02
CTHRC1-204ENST00000520880 LEPROTL1O95214 131 aa2.45□□□□□ -2.02
CTHRC1-204ENST00000520880 HBDP02042 147 aa2.45□□□□□ -2.02
CTHRC1-204ENST00000520880 RBMY1A1P0DJD3 496 aaKnown RBP2.45□□□□□ -2.02
CTHRC1-204ENST00000520880 RBMY1CP0DJD4 496 aa2.45□□□□□ -2.02
CTHRC1-204ENST00000520880 S100A4P26447 101 aaKnown RBP2.45□□□□□ -2.02
CTHRC1-204ENST00000520880 TSPOP30536 169 aa2.45□□□□□ -2.02
CTHRC1-204ENST00000520880 CDKN1BP46527 198 aa2.45□□□□□ -2.02
CTHRC1-204ENST00000520880 DEFB131AP59861 70 aa2.45□□□□□ -2.02
CTHRC1-204ENST00000520880 SCGB2A2Q13296 93 aa2.45□□□□□ -2.02
CTHRC1-204ENST00000520880 RBMY1FQ15415 496 aaKnown RBP2.45□□□□□ -2.02
CTHRC1-204ENST00000520880 DEFB114Q30KQ6 69 aa2.45□□□□□ -2.02
CTHRC1-204ENST00000520880 FAM159AQ6UWV7 190 aa2.45□□□□□ -2.02
CTHRC1-204ENST00000520880 ATOH7Q8N100 152 aa2.45□□□□□ -2.02
CTHRC1-204ENST00000520880 DEFB125Q8N687 156 aa2.45□□□□□ -2.02
CTHRC1-204ENST00000520880 OR2K2Q8NGT1 345 aa2.45□□□□□ -2.02
CTHRC1-204ENST00000520880 DYNLRB2Q8TF09 96 aa2.45□□□□□ -2.02
CTHRC1-204ENST00000520880 ZNF418Q8TF45 676 aaPredicted RBP2.45□□□□□ -2.02
CTHRC1-204ENST00000520880 MRAP2Q96G30 205 aa2.45□□□□□ -2.02
CTHRC1-204ENST00000520880 C14orf144Q96I85 54 aa2.45□□□□□ -2.02
CTHRC1-204ENST00000520880 C9orf85Q96MD7 179 aa2.45□□□□□ -2.02
CTHRC1-204ENST00000520880 NDUFAF3Q9BU61 184 aa2.45□□□□□ -2.02
CTHRC1-204ENST00000520880 TMEM70Q9BUB7 260 aa2.45□□□□□ -2.02
CTHRC1-204ENST00000520880 DPH3P1Q9H4G8 78 aa2.45□□□□□ -2.02
CTHRC1-204ENST00000520880 NXT2Q9NPJ8 142 aaKnown RBP2.45□□□□□ -2.02
CTHRC1-204ENST00000520880 HSPB8Q9UJY1 196 aa2.45□□□□□ -2.02
CTHRC1-204ENST00000520880 PHLDA3Q9Y5J5 127 aa2.45□□□□□ -2.02
CTHRC1-204ENST00000520880 TSSC4Q9Y5U2 329 aaPredicted RBP2.45□□□□□ -2.02
CTHRC1-204ENST00000520880 GCN1Q92616 2671 aaKnown RBP2.45□□□□□ -2.02
CTHRC1-204ENST00000520880 CCDC168Q8NDH2 2452 aa2.45□□□□□ -2.02
CTHRC1-204ENST00000520880 SORL1Q92673 2214 aa2.45□□□□□ -2.02
CTHRC1-204ENST00000520880 ACANP16112 2415 aa2.44□□□□□ -2.02
CTHRC1-204ENST00000520880 IGHV1OR15-1A0A075B7D0 117 aa2.44□□□□□ -2.02
CTHRC1-204ENST00000520880 TRAV25A0A0B4J276 109 aa2.44□□□□□ -2.02
CTHRC1-204ENST00000520880 C20orf202A1L168 122 aa2.44□□□□□ -2.02
CTHRC1-204ENST00000520880 OR4C46A6NHA9 309 aa2.44□□□□□ -2.02
CTHRC1-204ENST00000520880 MGPP08493 103 aa2.44□□□□□ -2.02
CTHRC1-204ENST00000520880 CD7P09564 240 aa2.44□□□□□ -2.02
CTHRC1-204ENST00000520880 FXYD7P58549 80 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms