RNA–Protein interactions for RNA: ENST00000520860.1

SRGAP3-212, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5

Gene SRGAP3, Length 422 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-212ENST00000520860 CXCL1P09341 107 aa7.91□□□□□ -1.14
SRGAP3-212ENST00000520860 OR5AL1P0C617 328 aa7.91□□□□□ -1.14
SRGAP3-212ENST00000520860 RPL13AP40429 203 aaKnown RBP7.91□□□□□ -1.14
SRGAP3-212ENST00000520860 NKX2-5P52952 324 aaPredicted RBP7.91□□□□□ -1.14
SRGAP3-212ENST00000520860 SYCNQ0VAF6 134 aa7.91□□□□□ -1.14
SRGAP3-212ENST00000520860 PGLYRP4Q96LB8 373 aa7.91□□□□□ -1.14
SRGAP3-212ENST00000520860 NKX6-2Q9C056 277 aaPredicted RBP7.91□□□□□ -1.14
SRGAP3-212ENST00000520860 IGHV1-58A0A0C4DH39 117 aa7.9□□□□□ -1.14
SRGAP3-212ENST00000520860 EIF5AP63241 154 aaKnown RBP7.9□□□□□ -1.14
SRGAP3-212ENST00000520860 FOXI1Q12951 378 aa7.9□□□□□ -1.14
SRGAP3-212ENST00000520860 COTL1Q14019 142 aa7.9□□□□□ -1.14
SRGAP3-212ENST00000520860 C9orf116Q5BN46 136 aaPredicted RBP7.9□□□□□ -1.14
SRGAP3-212ENST00000520860 LCE2DQ5TA82 110 aaPredicted RBP7.9□□□□□ -1.14
SRGAP3-212ENST00000520860 AMMECR1LQ6DCA0 310 aa7.9□□□□□ -1.14
SRGAP3-212ENST00000520860 PSMG3Q9BT73 122 aaPredicted RBP7.9□□□□□ -1.14
SRGAP3-212ENST00000520860 SSBP4Q9BWG4 385 aaPredicted RBP7.9□□□□□ -1.14
SRGAP3-212ENST00000520860 ZNF561-AS1K7EIQ3 104 aa7.89□□□□□ -1.15
SRGAP3-212ENST00000520860 LTAP01374 205 aa7.89□□□□□ -1.15
SRGAP3-212ENST00000520860 ATP6V0CP27449 155 aa7.89□□□□□ -1.15
SRGAP3-212ENST00000520860 H2BFSP57053 126 aa7.89□□□□□ -1.15
SRGAP3-212ENST00000520860 SERF2P84101 59 aa7.89□□□□□ -1.15
SRGAP3-212ENST00000520860 MED28Q9H204 178 aa7.89□□□□□ -1.15
SRGAP3-212ENST00000520860 FAM74A7A6NL05 159 aa7.88□□□□□ -1.15
SRGAP3-212ENST00000520860 SSNA1O43805 119 aa7.88□□□□□ -1.15
SRGAP3-212ENST00000520860 XCL1P47992 114 aa7.88□□□□□ -1.15
SRGAP3-212ENST00000520860 SUMO4Q6EEV6 95 aa7.88□□□□□ -1.15
SRGAP3-212ENST00000520860 RASL11AQ6T310 242 aa7.88□□□□□ -1.15
SRGAP3-212ENST00000520860 PHF5AQ7RTV0 110 aaKnown RBP7.88□□□□□ -1.15
SRGAP3-212ENST00000520860 KRTAP1-4P0C5Y4 121 aa7.87□□□□□ -1.15
SRGAP3-212ENST00000520860 FGF6P10767 208 aa7.87□□□□□ -1.15
SRGAP3-212ENST00000520860 RNASEKQ6P5S7 137 aaKnown RBP7.87□□□□□ -1.15
SRGAP3-212ENST00000520860 ISOC2Q96AB3 205 aa7.87□□□□□ -1.15
SRGAP3-212ENST00000520860 TNFSF18Q9UNG2 199 aa7.87□□□□□ -1.15
SRGAP3-212ENST00000520860 hCG_2014768A0A024R1R8 64 aa7.86□□□□□ -1.15
SRGAP3-212ENST00000520860 A0A087WZ39 114 aa7.86□□□□□ -1.15
SRGAP3-212ENST00000520860 TSPAN13O95857 204 aa7.86□□□□□ -1.15
SRGAP3-212ENST00000520860 BCL2P10415 239 aa7.86□□□□□ -1.15
SRGAP3-212ENST00000520860 AKR1C3P42330 323 aa7.86□□□□□ -1.15
SRGAP3-212ENST00000520860 CAMPP49913 170 aa7.86□□□□□ -1.15
SRGAP3-212ENST00000520860 ALG5Q9Y673 324 aa7.86□□□□□ -1.15
SRGAP3-212ENST00000520860 PFDN1O60925 122 aa7.85□□□□□ -1.15
SRGAP3-212ENST00000520860 NIT2Q9NQR4 276 aa7.85□□□□□ -1.15
SRGAP3-212ENST00000520860 CTXND1A0A1B0GTU2 59 aa7.84□□□□□ -1.15
SRGAP3-212ENST00000520860 CCL25O15444 150 aa7.84□□□□□ -1.15
SRGAP3-212ENST00000520860 APOMO95445 188 aa7.84□□□□□ -1.15
SRGAP3-212ENST00000520860 STOML3Q8TAV4 291 aa7.84□□□□□ -1.15
SRGAP3-212ENST00000520860 TSKUQ8WUA8 353 aa7.84□□□□□ -1.15
SRGAP3-212ENST00000520860 TCEAL7Q9BRU2 100 aa7.84□□□□□ -1.15
SRGAP3-212ENST00000520860 RPL18AQ02543 176 aaKnown RBP7.83□□□□□ -1.16
SRGAP3-212ENST00000520860 AKAP14Q86UN6 197 aa7.83□□□□□ -1.16
SRGAP3-212ENST00000520860 OR5A1Q8NGJ0 315 aa7.83□□□□□ -1.16
SRGAP3-212ENST00000520860 TPPP3Q9BW30 176 aa7.83□□□□□ -1.16
SRGAP3-212ENST00000520860 IGLV4-69A0A075B6H9 119 aa7.82□□□□□ -1.16
SRGAP3-212ENST00000520860 ZNF726P1Q15940 193 aa7.82□□□□□ -1.16
SRGAP3-212ENST00000520860 CST9LP1Q5W188 147 aa7.82□□□□□ -1.16
SRGAP3-212ENST00000520860 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.81□□□□□ -1.16
SRGAP3-212ENST00000520860 LINC00959A0A1B0GUT2 108 aa7.81□□□□□ -1.16
SRGAP3-212ENST00000520860 A0A1B0GVG6 124 aa7.81□□□□□ -1.16
SRGAP3-212ENST00000520860 IGKV2-29A2NJV5 120 aaPredicted RBP7.81□□□□□ -1.16
SRGAP3-212ENST00000520860 H7C423 109 aa7.81□□□□□ -1.16
SRGAP3-212ENST00000520860 NUP35Q8NFH5 326 aa7.81□□□□□ -1.16
SRGAP3-212ENST00000520860 CAMK2N2Q96S95 79 aa7.81□□□□□ -1.16
SRGAP3-212ENST00000520860 MLST8Q9BVC4 326 aa7.81□□□□□ -1.16
SRGAP3-212ENST00000520860 CARHSP1Q9Y2V2 147 aaKnown RBP7.81□□□□□ -1.16
SRGAP3-212ENST00000520860 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.8□□□□□ -1.16
SRGAP3-212ENST00000520860 S100A9P06702 114 aaKnown RBP7.8□□□□□ -1.16
SRGAP3-212ENST00000520860 GIPP09681 153 aaPredicted RBP7.8□□□□□ -1.16
SRGAP3-212ENST00000520860 NTF3P20783 257 aa7.8□□□□□ -1.16
SRGAP3-212ENST00000520860 FHITP49789 147 aa7.8□□□□□ -1.16
SRGAP3-212ENST00000520860 MEF2BQ02080 365 aaPredicted RBP7.8□□□□□ -1.16
SRGAP3-212ENST00000520860 SS18Q15532 418 aa7.8□□□□□ -1.16
SRGAP3-212ENST00000520860 BAGE2Q86Y30 109 aa7.8□□□□□ -1.16
SRGAP3-212ENST00000520860 BTF3L4Q96K17 158 aa7.8□□□□□ -1.16
SRGAP3-212ENST00000520860 CDIP1Q9H305 208 aa7.8□□□□□ -1.16
SRGAP3-212ENST00000520860 NCR2O95944 276 aa7.79□□□□□ -1.16
SRGAP3-212ENST00000520860 APCSP02743 223 aa7.79□□□□□ -1.16
SRGAP3-212ENST00000520860 TRGC1P0CF51 173 aa7.79□□□□□ -1.16
SRGAP3-212ENST00000520860 ZNF25P17030 456 aaPredicted RBP7.79□□□□□ -1.16
SRGAP3-212ENST00000520860 EIF5AL1Q6IS14 154 aaKnown RBP7.79□□□□□ -1.16
SRGAP3-212ENST00000520860 CD164L2Q6UWJ8 174 aa7.79□□□□□ -1.16
SRGAP3-212ENST00000520860 TMEM101Q96IK0 257 aa7.79□□□□□ -1.16
SRGAP3-212ENST00000520860 MALP21145 153 aa7.78□□□□□ -1.16
SRGAP3-212ENST00000520860 KRTAP11-1Q8IUC1 163 aa7.78□□□□□ -1.16
SRGAP3-212ENST00000520860 TCTE3Q8IZS6 198 aa7.78□□□□□ -1.16
SRGAP3-212ENST00000520860 MAP1LC3B2A6NCE7 125 aa7.77□□□□□ -1.17
SRGAP3-212ENST00000520860 LINC01547P58512 204 aaPredicted RBP7.77□□□□□ -1.17
SRGAP3-212ENST00000520860 AKR1C8PQ5T2L2 129 aa7.77□□□□□ -1.17
SRGAP3-212ENST00000520860 OR2D3Q8NGH3 330 aa7.77□□□□□ -1.17
SRGAP3-212ENST00000520860 MAP1LC3BQ9GZQ8 125 aa7.77□□□□□ -1.17
SRGAP3-212ENST00000520860 IGLC6P0CF74 106 aa7.76□□□□□ -1.17
SRGAP3-212ENST00000520860 C2orf48Q96LS8 159 aa7.76□□□□□ -1.17
SRGAP3-212ENST00000520860 OPRPNQ99935 248 aaPredicted RBP7.76□□□□□ -1.17
SRGAP3-212ENST00000520860 BCL2L11O43521 198 aa7.75□□□□□ -1.17
SRGAP3-212ENST00000520860 RPS20P60866 119 aaKnown RBP7.75□□□□□ -1.17
SRGAP3-212ENST00000520860 UBE2BP63146 152 aa7.75□□□□□ -1.17
SRGAP3-212ENST00000520860 BORCS7-ASMTA0A0B4J1R7 106 aa7.74□□□□□ -1.17
SRGAP3-212ENST00000520860 SCO2A0A1W2PP80 73 aa7.74□□□□□ -1.17
SRGAP3-212ENST00000520860 C19orf71A6NCJ1 209 aa7.74□□□□□ -1.17
SRGAP3-212ENST00000520860 COX7A2LO14548 114 aa7.74□□□□□ -1.17
SRGAP3-212ENST00000520860 PAGE4O60829 102 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms