RNA–Protein interactions for RNA: ENST00000520752.1

SHPRH-208, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 4

Gene SHPRH, Length 821 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-208ENST00000520752 Q1T7F1 81 aa6.24□□□□□ -1.41
SHPRH-208ENST00000520752 LINC00474Q9P2X8 69 aa6.24□□□□□ -1.41
SHPRH-208ENST00000520752 SMAD5-AS1Q9Y6J3 95 aa6.24□□□□□ -1.41
SHPRH-208ENST00000520752 BRCA2P51587 3418 aa6.24□□□□□ -1.41
SHPRH-208ENST00000520752 IGLV4-3A0A075B6K6 122 aa6.23□□□□□ -1.41
SHPRH-208ENST00000520752 IGHV3-21A0A0B4J1V1 117 aa6.23□□□□□ -1.41
SHPRH-208ENST00000520752 CCL21O00585 134 aa6.23□□□□□ -1.41
SHPRH-208ENST00000520752 NDUFS5O43920 106 aa6.23□□□□□ -1.41
SHPRH-208ENST00000520752 MIFP14174 115 aa6.23□□□□□ -1.41
SHPRH-208ENST00000520752 LINC00315P59091 139 aa6.23□□□□□ -1.41
SHPRH-208ENST00000520752 DAD1P61803 113 aa6.23□□□□□ -1.41
SHPRH-208ENST00000520752 DEFB133Q30KQ1 61 aa6.23□□□□□ -1.41
SHPRH-208ENST00000520752 TM2D3Q9BRN9 247 aa6.23□□□□□ -1.41
SHPRH-208ENST00000520752 VCANP13611 3396 aa6.23□□□□□ -1.41
SHPRH-208ENST00000520752 PRRC2AP48634 2157 aaKnown RBP6.23□□□□□ -1.41
SHPRH-208ENST00000520752 NACAE9PAV3 2078 aa6.22□□□□□ -1.41
SHPRH-208ENST00000520752 IGHV1-3A0A0C4DH29 117 aa6.22□□□□□ -1.41
SHPRH-208ENST00000520752 IGLV1-44P01699 117 aa6.22□□□□□ -1.41
SHPRH-208ENST00000520752 RPL39P62891 51 aaKnown RBP6.22□□□□□ -1.41
SHPRH-208ENST00000520752 Q0VFX4 171 aa6.22□□□□□ -1.41
SHPRH-208ENST00000520752 C11orf68Q9H3H3 251 aaKnown RBP6.22□□□□□ -1.41
SHPRH-208ENST00000520752 C14orf132Q9NPU4 83 aa6.22□□□□□ -1.41
SHPRH-208ENST00000520752 SPRR3Q9UBC9 169 aa6.22□□□□□ -1.41
SHPRH-208ENST00000520752 CENPFP49454 3210 aa6.22□□□□□ -1.41
SHPRH-208ENST00000520752 CACNA1GO43497 2377 aa6.22□□□□□ -1.41
SHPRH-208ENST00000520752 BUB1B-PAK6H3BSN5 160 aa6.21□□□□□ -1.42
SHPRH-208ENST00000520752 M0R1B8 84 aa6.21□□□□□ -1.42
SHPRH-208ENST00000520752 SS18Q15532 418 aa6.21□□□□□ -1.42
SHPRH-208ENST00000520752 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.21□□□□□ -1.42
SHPRH-208ENST00000520752 RPP25Q9BUL9 199 aaKnown RBP6.21□□□□□ -1.42
SHPRH-208ENST00000520752 MUC6Q6W4X9 2439 aa6.2□□□□□ -1.42
SHPRH-208ENST00000520752 IGLV11-55A0A075B6I3 123 aa6.2□□□□□ -1.42
SHPRH-208ENST00000520752 IGLV5-45A0A087WSX0 123 aa6.2□□□□□ -1.42
SHPRH-208ENST00000520752 PRAC2D3DTV9 90 aa6.2□□□□□ -1.42
SHPRH-208ENST00000520752 F6UB75 175 aa6.2□□□□□ -1.42
SHPRH-208ENST00000520752 IGHV1-2P23083 117 aa6.2□□□□□ -1.42
SHPRH-208ENST00000520752 C15orf32Q32M92 178 aa6.2□□□□□ -1.42
SHPRH-208ENST00000520752 KTN1-AS1Q86SY8 53 aa6.2□□□□□ -1.42
SHPRH-208ENST00000520752 LAMA3Q16787 3333 aa6.2□□□□□ -1.42
SHPRH-208ENST00000520752 CD28P10747 220 aa6.19□□□□□ -1.42
SHPRH-208ENST00000520752 CXCL6P80162 114 aa6.19□□□□□ -1.42
SHPRH-208ENST00000520752 ENHOQ6UWT2 76 aa6.19□□□□□ -1.42
SHPRH-208ENST00000520752 Q6ZSV7 163 aa6.19□□□□□ -1.42
SHPRH-208ENST00000520752 RMI2Q96E14 147 aa6.19□□□□□ -1.42
SHPRH-208ENST00000520752 FAM218AQ96MZ4 157 aa6.19□□□□□ -1.42
SHPRH-208ENST00000520752 LINC00167Q96N53 147 aa6.19□□□□□ -1.42
SHPRH-208ENST00000520752 HES7Q9BYE0 225 aa6.19□□□□□ -1.42
SHPRH-208ENST00000520752 ORMDL1Q9P0S3 153 aa6.19□□□□□ -1.42
SHPRH-208ENST00000520752 IGHV3-64A0A075B6Q5 118 aa6.18□□□□□ -1.42
SHPRH-208ENST00000520752 TRBV7-4A0A0J9YYF1 115 aa6.18□□□□□ -1.42
SHPRH-208ENST00000520752 H3BQ85 93 aa6.18□□□□□ -1.42
SHPRH-208ENST00000520752 CRPP02741 224 aa6.18□□□□□ -1.42
SHPRH-208ENST00000520752 UBE2BP63146 152 aa6.18□□□□□ -1.42
SHPRH-208ENST00000520752 KLK9Q2XQG4 91 aa6.18□□□□□ -1.42
SHPRH-208ENST00000520752 PIK3CD-AS1Q5SR53 167 aa6.18□□□□□ -1.42
SHPRH-208ENST00000520752 CD164L2Q6UWJ8 174 aa6.18□□□□□ -1.42
SHPRH-208ENST00000520752 KRTAP4-5Q9BYR2 181 aa6.18□□□□□ -1.42
SHPRH-208ENST00000520752 DEFB127Q9H1M4 99 aa6.18□□□□□ -1.42
SHPRH-208ENST00000520752 KLK9Q9UKQ9 250 aa6.18□□□□□ -1.42
SHPRH-208ENST00000520752 E7EQL1 145 aa6.17□□□□□ -1.42
SHPRH-208ENST00000520752 PDE6GP18545 87 aa6.17□□□□□ -1.42
SHPRH-208ENST00000520752 FUSP35637 526 aaKnown RBP eCLIP6.17□□□□□ -1.42
SHPRH-208ENST00000520752 OPRPNQ99935 248 aaPredicted RBP6.17□□□□□ -1.42
SHPRH-208ENST00000520752 Q9UF83 564 aa6.17□□□□□ -1.42
SHPRH-208ENST00000520752 FREM1Q5H8C1 2179 aa6.16□□□□□ -1.42
SHPRH-208ENST00000520752 IGLV5-39A0A0G2JS06 123 aa6.16□□□□□ -1.42
SHPRH-208ENST00000520752 PINLYPA6NC86 204 aa6.16□□□□□ -1.42
SHPRH-208ENST00000520752 CTSGP08311 255 aa6.16□□□□□ -1.42
SHPRH-208ENST00000520752 C10orf25Q5T742 122 aa6.16□□□□□ -1.42
SHPRH-208ENST00000520752 ZFAND2AQ8N6M9 145 aa6.16□□□□□ -1.42
SHPRH-208ENST00000520752 MPLKIPQ8TAP9 179 aa6.16□□□□□ -1.42
SHPRH-208ENST00000520752 ZNF625Q96I27 306 aaPredicted RBP6.16□□□□□ -1.42
SHPRH-208ENST00000520752 ZNRD1Q9P1U0 126 aa6.16□□□□□ -1.42
SHPRH-208ENST00000520752 IGLV3-9A0A075B6K5 115 aa6.15□□□□□ -1.42
SHPRH-208ENST00000520752 TMEM256-PLSCR3K7ERE1 68 aa6.15□□□□□ -1.42
SHPRH-208ENST00000520752 M0QY20 66 aa6.15□□□□□ -1.42
SHPRH-208ENST00000520752 RNASE3P12724 160 aaKnown RBP6.15□□□□□ -1.42
SHPRH-208ENST00000520752 FAM19A3Q7Z5A8 133 aa6.15□□□□□ -1.42
SHPRH-208ENST00000520752 C6orf223Q8N319 242 aa6.15□□□□□ -1.42
SHPRH-208ENST00000520752 NPBQ8NG41 125 aa6.15□□□□□ -1.42
SHPRH-208ENST00000520752 Q9HAA7 133 aa6.15□□□□□ -1.42
SHPRH-208ENST00000520752 RBM12B-AS1Q9P1G2 102 aa6.15□□□□□ -1.42
SHPRH-208ENST00000520752 HTTP42858 3142 aa6.15□□□□□ -1.43
SHPRH-208ENST00000520752 SPTBN5Q9NRC6 3674 aaKnown RBP6.15□□□□□ -1.43
SHPRH-208ENST00000520752 BRWD1Q9NSI6 2320 aa6.15□□□□□ -1.43
SHPRH-208ENST00000520752 NAV3Q8IVL0 2385 aa6.14□□□□□ -1.43
SHPRH-208ENST00000520752 UBE2L6O14933 153 aa6.14□□□□□ -1.43
SHPRH-208ENST00000520752 ADORA2A-AS1P86434 159 aa6.14□□□□□ -1.43
SHPRH-208ENST00000520752 MIR7-3HGQ8N6C7 128 aa6.14□□□□□ -1.43
SHPRH-208ENST00000520752 LINC01560Q8TB33 94 aa6.14□□□□□ -1.43
SHPRH-208ENST00000520752 TMEM254Q8TBM7 123 aa6.14□□□□□ -1.43
SHPRH-208ENST00000520752 TTTY12Q9BZ98 90 aa6.14□□□□□ -1.43
SHPRH-208ENST00000520752 SNURFQ9Y675 71 aa6.14□□□□□ -1.43
SHPRH-208ENST00000520752 COL27A1Q8IZC6 1860 aaPredicted RBP6.13□□□□□ -1.43
SHPRH-208ENST00000520752 LOC110117498A0A087WWA1 95 aa6.13□□□□□ -1.43
SHPRH-208ENST00000520752 IGF1P05019 195 aa6.13□□□□□ -1.43
SHPRH-208ENST00000520752 IGHV1-8P0DP01 117 aa6.13□□□□□ -1.43
SHPRH-208ENST00000520752 Q6ZVQ6 151 aa6.13□□□□□ -1.43
SHPRH-208ENST00000520752 PHF5AQ7RTV0 110 aaKnown RBP6.13□□□□□ -1.43
SHPRH-208ENST00000520752 ITLN2Q8WWU7 325 aaPredicted RBP6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms