RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 FGF6P10767 208 aa7.49□□□□□ -1.21
MCF2-209ENST00000520602 C12orf74Q32Q52 190 aa7.49□□□□□ -1.21
MCF2-209ENST00000520602 WFDC10AQ9H1F0 79 aa7.49□□□□□ -1.21
MCF2-209ENST00000520602 C9orf85Q96MD7 179 aa7.49□□□□□ -1.21
MCF2-209ENST00000520602 PLA2G2AP14555 144 aa7.48□□□□□ -1.21
MCF2-209ENST00000520602 TIMM17AQ99595 171 aa7.48□□□□□ -1.21
MCF2-209ENST00000520602 POLR2KP53803 58 aaKnown RBP7.48□□□□□ -1.21
MCF2-209ENST00000520602 CHD6Q8TD26 2715 aa7.48□□□□□ -1.21
MCF2-209ENST00000520602 E9PLD3 99 aa7.48□□□□□ -1.21
MCF2-209ENST00000520602 SPINK8P0C7L1 97 aa7.48□□□□□ -1.21
MCF2-209ENST00000520602 TRAV25A0A0B4J276 109 aa7.47□□□□□ -1.21
MCF2-209ENST00000520602 TMEM238C9JI98 176 aa7.47□□□□□ -1.21
MCF2-209ENST00000520602 Q6ZTI0 123 aa7.47□□□□□ -1.21
MCF2-209ENST00000520602 PCP4P48539 62 aa7.47□□□□□ -1.21
MCF2-209ENST00000520602 HIGD1BQ9P298 99 aa7.47□□□□□ -1.21
MCF2-209ENST00000520602 K7EP34 96 aa7.47□□□□□ -1.21
MCF2-209ENST00000520602 TRBV27A0A0K0K1C4 114 aa7.46□□□□□ -1.21
MCF2-209ENST00000520602 RNF152Q8N8N0 203 aa7.46□□□□□ -1.21
MCF2-209ENST00000520602 ESM1Q9NQ30 184 aa7.46□□□□□ -1.21
MCF2-209ENST00000520602 A0A096LNT2 108 aa7.46□□□□□ -1.21
MCF2-209ENST00000520602 A0A096LPF7 62 aa7.46□□□□□ -1.21
MCF2-209ENST00000520602 H3BMG7 143 aa7.46□□□□□ -1.21
MCF2-209ENST00000520602 COX6CP09669 75 aa7.46□□□□□ -1.21
MCF2-209ENST00000520602 NDUFA12Q9UI09 145 aa7.46□□□□□ -1.21
MCF2-209ENST00000520602 GAGE6Q13070 117 aa7.46□□□□□ -1.22
MCF2-209ENST00000520602 TAL2Q16559 108 aa7.46□□□□□ -1.22
MCF2-209ENST00000520602 ODF3L2Q3SX64 289 aa7.46□□□□□ -1.22
MCF2-209ENST00000520602 OCIAD2Q56VL3 154 aa7.46□□□□□ -1.22
MCF2-209ENST00000520602 ERG28Q9UKR5 140 aa7.46□□□□□ -1.22
MCF2-209ENST00000520602 FAM19A4Q96LR4 140 aa7.45□□□□□ -1.22
MCF2-209ENST00000520602 TRAV8-3A0A0A6YYJ7 113 aa7.45□□□□□ -1.22
MCF2-209ENST00000520602 CFAP126Q5VTH2 177 aa7.45□□□□□ -1.22
MCF2-209ENST00000520602 RNASE8Q8TDE3 154 aaKnown RBP7.45□□□□□ -1.22
MCF2-209ENST00000520602 SPENQ96T58 3664 aaKnown RBP7.45□□□□□ -1.22
MCF2-209ENST00000520602 C11orf68Q9H3H3 251 aaKnown RBP7.45□□□□□ -1.22
MCF2-209ENST00000520602 INAFM1C9JVW0 142 aa7.44□□□□□ -1.22
MCF2-209ENST00000520602 TRBV7-3A0A075B6L6 115 aa7.44□□□□□ -1.22
MCF2-209ENST00000520602 IGLL5B9A064 214 aa7.44□□□□□ -1.22
MCF2-209ENST00000520602 TSHBP01222 138 aa7.44□□□□□ -1.22
MCF2-209ENST00000520602 TMEM243Q9BU79 118 aa7.44□□□□□ -1.22
MCF2-209ENST00000520602 KIF25-AS1Q9Y6Z4 181 aa7.44□□□□□ -1.22
MCF2-209ENST00000520602 TRBV6-5A0A0K0K1A5 114 aa7.44□□□□□ -1.22
MCF2-209ENST00000520602 RBMY1BA6NDE4 496 aaKnown RBP7.44□□□□□ -1.22
MCF2-209ENST00000520602 RBMY1EA6NEQ0 496 aaKnown RBP7.44□□□□□ -1.22
MCF2-209ENST00000520602 RBMY1DP0C7P1 496 aaKnown RBP7.44□□□□□ -1.22
MCF2-209ENST00000520602 RBMY1A1P0DJD3 496 aaKnown RBP7.44□□□□□ -1.22
MCF2-209ENST00000520602 RBMY1CP0DJD4 496 aa7.44□□□□□ -1.22
MCF2-209ENST00000520602 RBMY1FQ15415 496 aaKnown RBP7.44□□□□□ -1.22
MCF2-209ENST00000520602 ETDBQ3ZM63 59 aa7.44□□□□□ -1.22
MCF2-209ENST00000520602 PRIMA1Q86XR5 153 aa7.44□□□□□ -1.22
MCF2-209ENST00000520602 ZNF575Q86XF7 245 aa7.43□□□□□ -1.22
MCF2-209ENST00000520602 DEFB4AO15263 64 aa7.43□□□□□ -1.22
MCF2-209ENST00000520602 FSHBP01225 129 aa7.43□□□□□ -1.22
MCF2-209ENST00000520602 RNASE1P07998 156 aaKnown RBP7.43□□□□□ -1.22
MCF2-209ENST00000520602 IGLV4-3A0A075B6K6 122 aa7.43□□□□□ -1.22
MCF2-209ENST00000520602 PRSS47A8MTI9 375 aa7.43□□□□□ -1.22
MCF2-209ENST00000520602 K7EQD1 137 aa7.43□□□□□ -1.22
MCF2-209ENST00000520602 LY6G6DO95868 133 aa7.43□□□□□ -1.22
MCF2-209ENST00000520602 LINC00315P59091 139 aa7.43□□□□□ -1.22
MCF2-209ENST00000520602 Q6ZUT4 128 aa7.43□□□□□ -1.22
MCF2-209ENST00000520602 ZMAT4Q9H898 229 aa7.43□□□□□ -1.22
MCF2-209ENST00000520602 SPANXA1Q9NS26 97 aa7.43□□□□□ -1.22
MCF2-209ENST00000520602 IGIPA6NJ69 53 aa7.42□□□□□ -1.22
MCF2-209ENST00000520602 TMEM263Q8WUH6 116 aaKnown RBP7.42□□□□□ -1.22
MCF2-209ENST00000520602 LINC00467Q9BRT7 94 aa7.42□□□□□ -1.22
MCF2-209ENST00000520602 LEPROTO15243 131 aa7.42□□□□□ -1.22
MCF2-209ENST00000520602 NXPH4O95158 308 aa7.42□□□□□ -1.22
MCF2-209ENST00000520602 DNAJC30Q96LL9 226 aa7.42□□□□□ -1.22
MCF2-209ENST00000520602 MUC4Q99102 2169 aa7.42□□□□□ -1.22
MCF2-209ENST00000520602 CRLF1O75462 422 aa7.41□□□□□ -1.22
MCF2-209ENST00000520602 C16orf74Q96GX8 76 aa7.41□□□□□ -1.22
MCF2-209ENST00000520602 CSMD1Q96PZ7 3565 aa7.41□□□□□ -1.22
MCF2-209ENST00000520602 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.41□□□□□ -1.22
MCF2-209ENST00000520602 PRO1854Q9UHT4 67 aa7.41□□□□□ -1.22
MCF2-209ENST00000520602 HILS1P60008 231 aa7.41□□□□□ -1.22
MCF2-209ENST00000520602 OR13C6PQ8NH95 151 aa7.41□□□□□ -1.22
MCF2-209ENST00000520602 A0A0J9YY99 117 aa7.4□□□□□ -1.22
MCF2-209ENST00000520602 A4D1N5 150 aa7.4□□□□□ -1.22
MCF2-209ENST00000520602 RPL32P62910 135 aaKnown RBP7.4□□□□□ -1.22
MCF2-209ENST00000520602 Q8N2B8 174 aa7.4□□□□□ -1.22
MCF2-209ENST00000520602 DAND5Q8N907 189 aa7.4□□□□□ -1.22
MCF2-209ENST00000520602 CIDEAO60543 219 aa7.4□□□□□ -1.22
MCF2-209ENST00000520602 IGHV3-30-3P0DP02 117 aa7.4□□□□□ -1.22
MCF2-209ENST00000520602 LINC00158P58513 81 aa7.4□□□□□ -1.22
MCF2-209ENST00000520602 MORN3Q6PF18 240 aaPredicted RBP7.4□□□□□ -1.22
MCF2-209ENST00000520602 CLPSL2Q6UWE3 100 aa7.4□□□□□ -1.22
MCF2-209ENST00000520602 Q6ZSN1 163 aa7.4□□□□□ -1.22
MCF2-209ENST00000520602 TM2D2Q9BX73 214 aa7.4□□□□□ -1.22
MCF2-209ENST00000520602 CELSR2Q9HCU4 2923 aa7.4□□□□□ -1.23
MCF2-209ENST00000520602 ZNF22P17026 224 aaPredicted RBP7.4□□□□□ -1.23
MCF2-209ENST00000520602 MUSTN1Q8IVN3 82 aa7.4□□□□□ -1.23
MCF2-209ENST00000520602 Q9UF83 564 aa7.39□□□□□ -1.23
MCF2-209ENST00000520602 A8MZ25 164 aa7.39□□□□□ -1.23
MCF2-209ENST00000520602 DEFB135Q30KP9 77 aa7.39□□□□□ -1.23
MCF2-209ENST00000520602 SLC25A29Q8N8R3 303 aa7.39□□□□□ -1.23
MCF2-209ENST00000520602 F5H768 121 aa7.39□□□□□ -1.23
MCF2-209ENST00000520602 C1orf158Q8N1D5 194 aa7.39□□□□□ -1.23
MCF2-209ENST00000520602 LINC00482Q8N8I6 264 aa7.39□□□□□ -1.23
MCF2-209ENST00000520602 Q9H8V8 135 aa7.39□□□□□ -1.23
MCF2-209ENST00000520602 DAZ2Q13117 558 aaKnown RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms