RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 SPATA12Q7Z6I5 190 aa6.05□□□□□ -1.44
VAPB-206ENST00000520497 RPL36ALQ969Q0 106 aaKnown RBP6.05□□□□□ -1.44
VAPB-206ENST00000520497 ZNF479Q96JC4 524 aa6.05□□□□□ -1.44
VAPB-206ENST00000520497 CELA1Q9UNI1 258 aa6.05□□□□□ -1.44
VAPB-206ENST00000520497 H0Y8G0 127 aa6.04□□□□□ -1.44
VAPB-206ENST00000520497 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.04□□□□□ -1.44
VAPB-206ENST00000520497 PRSS1P07477 247 aa6.04□□□□□ -1.44
VAPB-206ENST00000520497 PKIAP61925 76 aa6.04□□□□□ -1.44
VAPB-206ENST00000520497 Q6ZN92 141 aa6.04□□□□□ -1.44
VAPB-206ENST00000520497 SCGB3A1Q96QR1 104 aa6.04□□□□□ -1.44
VAPB-206ENST00000520497 B9D2Q9BPU9 175 aa6.04□□□□□ -1.44
VAPB-206ENST00000520497 PRADC1Q9BSG0 188 aa6.04□□□□□ -1.44
VAPB-206ENST00000520497 HUWE1Q7Z6Z7 4374 aaKnown RBP6.04□□□□□ -1.44
VAPB-206ENST00000520497 TRBV6-4A0A1B0GX49 114 aa6.03□□□□□ -1.44
VAPB-206ENST00000520497 SPART-AS1P0CW21 52 aa6.03□□□□□ -1.44
VAPB-206ENST00000520497 COTL1Q14019 142 aa6.03□□□□□ -1.44
VAPB-206ENST00000520497 PAPPA-AS1Q5QFB9 102 aa6.03□□□□□ -1.44
VAPB-206ENST00000520497 LGALS9CQ6DKI2 356 aa6.03□□□□□ -1.44
VAPB-206ENST00000520497 C2orf66Q6UXQ4 117 aa6.03□□□□□ -1.44
VAPB-206ENST00000520497 TEX43Q6ZNM6 134 aa6.03□□□□□ -1.44
VAPB-206ENST00000520497 Q6ZSN1 163 aa6.03□□□□□ -1.44
VAPB-206ENST00000520497 TOMM6Q96B49 74 aa6.03□□□□□ -1.44
VAPB-206ENST00000520497 TMEM141Q96I45 108 aa6.03□□□□□ -1.44
VAPB-206ENST00000520497 DNAH9Q9NYC9 4486 aa6.02□□□□□ -1.45
VAPB-206ENST00000520497 TRBV7-3A0A075B6L6 115 aa6.02□□□□□ -1.45
VAPB-206ENST00000520497 A0A096LNJ9 63 aa6.02□□□□□ -1.45
VAPB-206ENST00000520497 DEFB130BP0DP73 79 aa6.02□□□□□ -1.45
VAPB-206ENST00000520497 DEFB130AP0DP74 79 aa6.02□□□□□ -1.45
VAPB-206ENST00000520497 DAD1P61803 113 aa6.02□□□□□ -1.45
VAPB-206ENST00000520497 FHL2Q14192 279 aa6.02□□□□□ -1.45
VAPB-206ENST00000520497 TMEM97Q5BJF2 176 aa6.02□□□□□ -1.45
VAPB-206ENST00000520497 ERASQ7Z444 233 aa6.02□□□□□ -1.45
VAPB-206ENST00000520497 DAZ4Q86SG3 579 aaKnown RBP6.02□□□□□ -1.45
VAPB-206ENST00000520497 DAZ3Q9NR90 486 aaKnown RBP6.02□□□□□ -1.45
VAPB-206ENST00000520497 TRAV9-2A0A087WT02 112 aa6.01□□□□□ -1.45
VAPB-206ENST00000520497 A0A0J9YWU9 116 aa6.01□□□□□ -1.45
VAPB-206ENST00000520497 PCP4L1A6NKN8 68 aa6.01□□□□□ -1.45
VAPB-206ENST00000520497 P0DMU3 169 aa6.01□□□□□ -1.45
VAPB-206ENST00000520497 FAM231AP0DMU4 169 aa6.01□□□□□ -1.45
VAPB-206ENST00000520497 FAM231CP0DMU5 169 aa6.01□□□□□ -1.45
VAPB-206ENST00000520497 LINC01545Q5VT33 79 aa6.01□□□□□ -1.45
VAPB-206ENST00000520497 LINC00173Q6ZV60 143 aa6.01□□□□□ -1.45
VAPB-206ENST00000520497 NEGR1Q7Z3B1 354 aa6.01□□□□□ -1.45
VAPB-206ENST00000520497 NEXN-AS1Q8NBZ9 246 aa6.01□□□□□ -1.45
VAPB-206ENST00000520497 ZMAT4Q9H898 229 aa6.01□□□□□ -1.45
VAPB-206ENST00000520497 TRAV12-1A0A0B4J245 112 aa6□□□□□ -1.45
VAPB-206ENST00000520497 TSHBP01222 138 aa6□□□□□ -1.45
VAPB-206ENST00000520497 NPSP0C0P6 89 aa6□□□□□ -1.45
VAPB-206ENST00000520497 PLNP26678 52 aa6□□□□□ -1.45
VAPB-206ENST00000520497 C12orf74Q32Q52 190 aa6□□□□□ -1.45
VAPB-206ENST00000520497 SPATA45Q537H7 98 aa6□□□□□ -1.45
VAPB-206ENST00000520497 SLC25A29Q8N8R3 303 aa6□□□□□ -1.45
VAPB-206ENST00000520497 ZNRF2Q8NHG8 242 aa6□□□□□ -1.45
VAPB-206ENST00000520497 TIMM17AQ99595 171 aa6□□□□□ -1.45
VAPB-206ENST00000520497 Q9UF83 564 aa6□□□□□ -1.45
VAPB-206ENST00000520497 PAM16Q9Y3D7 125 aa6□□□□□ -1.45
VAPB-206ENST00000520497 KMT2CQ8NEZ4 4911 aaKnown RBP6□□□□□ -1.45
VAPB-206ENST00000520497 RYR3Q15413 4870 aa6□□□□□ -1.45
VAPB-206ENST00000520497 DPM2O94777 84 aa5.99□□□□□ -1.45
VAPB-206ENST00000520497 ATP5G1P05496 136 aa5.99□□□□□ -1.45
VAPB-206ENST00000520497 Q8N976 141 aa5.99□□□□□ -1.45
VAPB-206ENST00000520497 C20orf203Q8NBC4 194 aa5.99□□□□□ -1.45
VAPB-206ENST00000520497 PRO0255Q9UI72 69 aa5.99□□□□□ -1.45
VAPB-206ENST00000520497 A0A087WX48 190 aa5.98□□□□□ -1.45
VAPB-206ENST00000520497 GAGE12JA6NER3 117 aa5.98□□□□□ -1.45
VAPB-206ENST00000520497 IGKCP01834 107 aa5.98□□□□□ -1.45
VAPB-206ENST00000520497 NHLRC4P0CG21 123 aaPredicted RBP5.98□□□□□ -1.45
VAPB-206ENST00000520497 LINC00694P0DN24 101 aa5.98□□□□□ -1.45
VAPB-206ENST00000520497 CRYBA4P53673 196 aa5.98□□□□□ -1.45
VAPB-206ENST00000520497 UBE2D3P61077 147 aa5.98□□□□□ -1.45
VAPB-206ENST00000520497 UBE2D2P62837 147 aa5.98□□□□□ -1.45
VAPB-206ENST00000520497 GAGE1Q13065 139 aa5.98□□□□□ -1.45
VAPB-206ENST00000520497 GAGE4Q13068 117 aa5.98□□□□□ -1.45
VAPB-206ENST00000520497 GAGE5Q13069 117 aa5.98□□□□□ -1.45
VAPB-206ENST00000520497 PMVKQ15126 192 aa5.98□□□□□ -1.45
VAPB-206ENST00000520497 GAGE13Q4V321 117 aa5.98□□□□□ -1.45
VAPB-206ENST00000520497 CDPF1Q6NVV7 123 aa5.98□□□□□ -1.45
VAPB-206ENST00000520497 ATOH7Q8N100 152 aa5.98□□□□□ -1.45
VAPB-206ENST00000520497 SPANXA1Q9NS26 97 aa5.98□□□□□ -1.45
VAPB-206ENST00000520497 HHLA3Q9XRX5 114 aa5.98□□□□□ -1.45
VAPB-206ENST00000520497 TRBV25-1A0A075B6N4 114 aa5.97□□□□□ -1.45
VAPB-206ENST00000520497 F8VRH5 84 aa5.97□□□□□ -1.45
VAPB-206ENST00000520497 H7C423 109 aa5.97□□□□□ -1.45
VAPB-206ENST00000520497 UBE2L6O14933 153 aa5.97□□□□□ -1.45
VAPB-206ENST00000520497 ODF1Q14990 250 aa5.97□□□□□ -1.45
VAPB-206ENST00000520497 DGAT2L7PQ6IED9 249 aa5.97□□□□□ -1.45
VAPB-206ENST00000520497 Q6ZTC4 211 aa5.97□□□□□ -1.45
VAPB-206ENST00000520497 SH2D6Q7Z4S9 175 aa5.97□□□□□ -1.45
VAPB-206ENST00000520497 ZNF664Q8N3J9 261 aa5.97□□□□□ -1.45
VAPB-206ENST00000520497 PHLDA1Q8WV24 401 aaPredicted RBP5.97□□□□□ -1.45
VAPB-206ENST00000520497 PMCHL2Q9BQD1 86 aa5.97□□□□□ -1.45
VAPB-206ENST00000520497 C2orf88Q9BSF0 95 aa5.97□□□□□ -1.45
VAPB-206ENST00000520497 GTSF1LQ9H1H1 148 aa5.97□□□□□ -1.45
VAPB-206ENST00000520497 PRO1933Q9H354 126 aa5.97□□□□□ -1.45
VAPB-206ENST00000520497 CHTOPQ9Y3Y2 248 aaKnown RBP5.97□□□□□ -1.45
VAPB-206ENST00000520497 PYGO1Q9Y3Y4 419 aa5.97□□□□□ -1.45
VAPB-206ENST00000520497 LOC100131303A0A0U1RQF7 123 aa5.96□□□□□ -1.46
VAPB-206ENST00000520497 PAX4O43316 350 aa5.96□□□□□ -1.46
VAPB-206ENST00000520497 DDTP30046 118 aa5.96□□□□□ -1.46
VAPB-206ENST00000520497 NANOS2P60321 138 aaKnown RBP5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms