RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 C20orf203Q8NBC4 194 aa10.48□□□□□ -0.73
IGHV3-42-201ENST00000520410 AP5S1Q9NUS5 200 aa10.48□□□□□ -0.73
IGHV3-42-201ENST00000520410 DPH3Q96FX2 82 aa10.47□□□□□ -0.73
IGHV3-42-201ENST00000520410 PGLYRP4Q96LB8 373 aa10.47□□□□□ -0.73
IGHV3-42-201ENST00000520410 TRAV8-4A0A0B4J246 113 aa10.46□□□□□ -0.73
IGHV3-42-201ENST00000520410 DGAT2L7PQ6IED9 249 aa10.46□□□□□ -0.73
IGHV3-42-201ENST00000520410 RNASEKQ6P5S7 137 aaKnown RBP10.46□□□□□ -0.73
IGHV3-42-201ENST00000520410 GATD1Q8NB37 220 aa10.46□□□□□ -0.73
IGHV3-42-201ENST00000520410 RPL39LQ96EH5 51 aaKnown RBP10.46□□□□□ -0.73
IGHV3-42-201ENST00000520410 EIF5A2Q9GZV4 153 aaKnown RBP10.46□□□□□ -0.73
IGHV3-42-201ENST00000520410 APCSP02743 223 aa10.45□□□□□ -0.74
IGHV3-42-201ENST00000520410 RPL37AP61513 92 aaKnown RBP10.45□□□□□ -0.74
IGHV3-42-201ENST00000520410 Q6ZNX1 250 aa10.45□□□□□ -0.74
IGHV3-42-201ENST00000520410 CLRN3Q8NCR9 226 aa10.45□□□□□ -0.74
IGHV3-42-201ENST00000520410 GFRA4Q9GZZ7 299 aa10.45□□□□□ -0.74
IGHV3-42-201ENST00000520410 TMEM250H0YL14 139 aa10.44□□□□□ -0.74
IGHV3-42-201ENST00000520410 GTSF1Q8WW33 167 aa10.44□□□□□ -0.74
IGHV3-42-201ENST00000520410 VPS13BQ7Z7G8 4022 aa10.43□□□□□ -0.74
IGHV3-42-201ENST00000520410 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.43□□□□□ -0.74
IGHV3-42-201ENST00000520410 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.43□□□□□ -0.74
IGHV3-42-201ENST00000520410 A0A1B0GUV1 79 aa10.43□□□□□ -0.74
IGHV3-42-201ENST00000520410 IGKV2-29A2NJV5 120 aaPredicted RBP10.43□□□□□ -0.74
IGHV3-42-201ENST00000520410 GAGE12HA6NDE8 117 aa10.43□□□□□ -0.74
IGHV3-42-201ENST00000520410 A8MWL6 223 aa10.43□□□□□ -0.74
IGHV3-42-201ENST00000520410 FOXA3P55318 350 aaPredicted RBP10.43□□□□□ -0.74
IGHV3-42-201ENST00000520410 C9orf163Q8N9P6 203 aa10.43□□□□□ -0.74
IGHV3-42-201ENST00000520410 SMIM7Q9BQ49 75 aa10.43□□□□□ -0.74
IGHV3-42-201ENST00000520410 PMCHP20382 165 aa10.42□□□□□ -0.74
IGHV3-42-201ENST00000520410 KRTAP26-1Q6PEX3 210 aa10.42□□□□□ -0.74
IGHV3-42-201ENST00000520410 CNFNQ9BYD5 112 aa10.42□□□□□ -0.74
IGHV3-42-201ENST00000520410 SDHAF1A6NFY7 115 aa10.41□□□□□ -0.74
IGHV3-42-201ENST00000520410 TEX261Q6UWH6 196 aa10.41□□□□□ -0.74
IGHV3-42-201ENST00000520410 BTF3L4Q96K17 158 aa10.41□□□□□ -0.74
IGHV3-42-201ENST00000520410 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.41□□□□□ -0.74
IGHV3-42-201ENST00000520410 FLG2Q5D862 2391 aaPredicted RBP10.4□□□□□ -0.74
IGHV3-42-201ENST00000520410 IGHV3-64A0A075B6Q5 118 aa10.4□□□□□ -0.74
IGHV3-42-201ENST00000520410 ZNF727A8MUV8 499 aa10.4□□□□□ -0.74
IGHV3-42-201ENST00000520410 HIGD2BQ4VC39 106 aa10.4□□□□□ -0.74
IGHV3-42-201ENST00000520410 TMEM101Q96IK0 257 aa10.4□□□□□ -0.74
IGHV3-42-201ENST00000520410 DMBT1Q9UGM3 2413 aaPredicted RBP10.4□□□□□ -0.74
IGHV3-42-201ENST00000520410 NCR2O95944 276 aa10.39□□□□□ -0.75
IGHV3-42-201ENST00000520410 CFAP161Q6P656 301 aa10.39□□□□□ -0.75
IGHV3-42-201ENST00000520410 FAM231DQ6ZW35 169 aa10.39□□□□□ -0.75
IGHV3-42-201ENST00000520410 DNAH8Q96JB1 4490 aa10.39□□□□□ -0.75
IGHV3-42-201ENST00000520410 SRRM2Q9UQ35 2752 aaKnown RBP10.38□□□□□ -0.75
IGHV3-42-201ENST00000520410 KRTAP29-1A8MX34 341 aaPredicted RBP10.38□□□□□ -0.75
IGHV3-42-201ENST00000520410 I3L3M4 83 aa10.38□□□□□ -0.75
IGHV3-42-201ENST00000520410 FGF6P10767 208 aa10.38□□□□□ -0.75
IGHV3-42-201ENST00000520410 ST20Q9HBF5 79 aa10.38□□□□□ -0.75
IGHV3-42-201ENST00000520410 HIGD1CA8MV81 97 aa10.37□□□□□ -0.75
IGHV3-42-201ENST00000520410 CNBPP62633 177 aaKnown RBP10.37□□□□□ -0.75
IGHV3-42-201ENST00000520410 CHCHD10Q8WYQ3 142 aaPredicted RBP10.37□□□□□ -0.75
IGHV3-42-201ENST00000520410 TMEM242Q9NWH2 141 aa10.37□□□□□ -0.75
IGHV3-42-201ENST00000520410 A0A1B0GUT8 65 aa10.36□□□□□ -0.75
IGHV3-42-201ENST00000520410 PANO1I0J062 215 aa10.36□□□□□ -0.75
IGHV3-42-201ENST00000520410 CHTF8P0CG12 524 aa10.36□□□□□ -0.75
IGHV3-42-201ENST00000520410 CT83Q5H943 113 aa10.36□□□□□ -0.75
IGHV3-42-201ENST00000520410 SDIM1Q6ZPB5 146 aa10.36□□□□□ -0.75
IGHV3-42-201ENST00000520410 LINC01551Q86U37 167 aa10.36□□□□□ -0.75
IGHV3-42-201ENST00000520410 XCL1P47992 114 aa10.35□□□□□ -0.75
IGHV3-42-201ENST00000520410 OR5A1Q8NGJ0 315 aa10.35□□□□□ -0.75
IGHV3-42-201ENST00000520410 TSKUQ8WUA8 353 aa10.35□□□□□ -0.75
IGHV3-42-201ENST00000520410 MRAP2Q96G30 205 aa10.35□□□□□ -0.75
IGHV3-42-201ENST00000520410 FAM210AQ96ND0 272 aa10.35□□□□□ -0.75
IGHV3-42-201ENST00000520410 H7C423 109 aa10.34□□□□□ -0.75
IGHV3-42-201ENST00000520410 C15orf56Q8N910 161 aa10.34□□□□□ -0.75
IGHV3-42-201ENST00000520410 LYPD6BQ8NI32 183 aa10.34□□□□□ -0.75
IGHV3-42-201ENST00000520410 HERC1Q15751 4861 aa10.33□□□□□ -0.76
IGHV3-42-201ENST00000520410 IGKV2-24A0A0C4DH68 120 aa10.33□□□□□ -0.76
IGHV3-42-201ENST00000520410 GAS8-AS1O95177 125 aa10.33□□□□□ -0.76
IGHV3-42-201ENST00000520410 SRP19P09132 144 aaKnown RBP10.33□□□□□ -0.76
IGHV3-42-201ENST00000520410 ZNF25P17030 456 aaPredicted RBP10.33□□□□□ -0.76
IGHV3-42-201ENST00000520410 FCER1GP30273 86 aa10.33□□□□□ -0.76
IGHV3-42-201ENST00000520410 KRTAP10-4P60372 401 aaPredicted RBP10.33□□□□□ -0.76
IGHV3-42-201ENST00000520410 RIGQ13278 110 aa10.33□□□□□ -0.76
IGHV3-42-201ENST00000520410 AMN1Q8IY45 258 aa10.33□□□□□ -0.76
IGHV3-42-201ENST00000520410 MYCBP2O75592 4640 aa10.33□□□□□ -0.76
IGHV3-42-201ENST00000520410 SMKR1H3BMG3 65 aa10.32□□□□□ -0.76
IGHV3-42-201ENST00000520410 RPS10P46783 165 aaKnown RBP10.32□□□□□ -0.76
IGHV3-42-201ENST00000520410 ADIRFQ15847 76 aa10.32□□□□□ -0.76
IGHV3-42-201ENST00000520410 TMEM191AQ9H0A3 160 aa10.32□□□□□ -0.76
IGHV3-42-201ENST00000520410 OSTCQ9NRP0 149 aa10.32□□□□□ -0.76
IGHV3-42-201ENST00000520410 A0A087WYN8 130 aa10.31□□□□□ -0.76
IGHV3-42-201ENST00000520410 TRBV6-5A0A0K0K1A5 114 aa10.31□□□□□ -0.76
IGHV3-42-201ENST00000520410 CCL25O15444 150 aa10.31□□□□□ -0.76
IGHV3-42-201ENST00000520410 OXTP01178 125 aa10.31□□□□□ -0.76
IGHV3-42-201ENST00000520410 TSHBP01222 138 aa10.31□□□□□ -0.76
IGHV3-42-201ENST00000520410 SLPIP03973 132 aa10.31□□□□□ -0.76
IGHV3-42-201ENST00000520410 COX6A2Q02221 97 aa10.31□□□□□ -0.76
IGHV3-42-201ENST00000520410 SS18Q15532 418 aa10.31□□□□□ -0.76
IGHV3-42-201ENST00000520410 MAJINQ3KP22 176 aa10.31□□□□□ -0.76
IGHV3-42-201ENST00000520410 C7orf77A4D0Y5 90 aa10.3□□□□□ -0.76
IGHV3-42-201ENST00000520410 RAB4AP20338 218 aa10.3□□□□□ -0.76
IGHV3-42-201ENST00000520410 TMEM241Q24JQ0 296 aa10.3□□□□□ -0.76
IGHV3-42-201ENST00000520410 C7orf33Q8WU49 177 aa10.3□□□□□ -0.76
IGHV3-42-201ENST00000520410 HNRNPA3P51991 378 aaKnown RBP10.29□□□□□ -0.76
IGHV3-42-201ENST00000520410 SPACA4Q8TDM5 124 aa10.29□□□□□ -0.76
IGHV3-42-201ENST00000520410 RNF185Q96GF1 192 aa10.29□□□□□ -0.76
IGHV3-42-201ENST00000520410 LINC00959A0A1B0GUT2 108 aa10.28□□□□□ -0.76
IGHV3-42-201ENST00000520410 FAM231BA6NCW3 169 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms