RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, human

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SDCBP-208	ENST00000520228	GNG4	P50150	75 aa		4.61	□□□□□ -1.67
SDCBP-208	ENST00000520228	NEGR1	Q7Z3B1	354 aa		4.61	□□□□□ -1.67
SDCBP-208	ENST00000520228	LYPD6B	Q8NI32	183 aa		4.61	□□□□□ -1.67
SDCBP-208	ENST00000520228	PHLDA3	Q9Y5J5	127 aa		4.61	□□□□□ -1.67
SDCBP-208	ENST00000520228	VPS13D	Q5THJ4	4388 aa		4.6	□□□□□ -1.67
SDCBP-208	ENST00000520228		M0R381	172 aa		4.6	□□□□□ -1.67
SDCBP-208	ENST00000520228	IGLV2-8	P01709	118 aa		4.6	□□□□□ -1.67
SDCBP-208	ENST00000520228	RPL19	P84098	196 aa	Known RBP	4.6	□□□□□ -1.67
SDCBP-208	ENST00000520228	ZFP2	Q6ZN57	461 aa		4.6	□□□□□ -1.67
SDCBP-208	ENST00000520228	SLC25A29	Q8N8R3	303 aa		4.6	□□□□□ -1.67
SDCBP-208	ENST00000520228	SMIM12	Q96EX1	92 aa		4.6	□□□□□ -1.67
SDCBP-208	ENST00000520228	PRADC1	Q9BSG0	188 aa		4.6	□□□□□ -1.67
SDCBP-208	ENST00000520228	UPK3B	Q9BT76	320 aa		4.6	□□□□□ -1.67
SDCBP-208	ENST00000520228	BIN3	Q9NQY0	253 aa		4.6	□□□□□ -1.67
SDCBP-208	ENST00000520228	MRPS16	Q9Y3D3	137 aa	Known RBP	4.6	□□□□□ -1.67
SDCBP-208	ENST00000520228	TRBV20OR9-2	A0A075B6H5	130 aa		4.59	□□□□□ -1.67
SDCBP-208	ENST00000520228	LOC100131303	A0A0U1RQF7	123 aa		4.59	□□□□□ -1.67
SDCBP-208	ENST00000520228	NBDY	A0A0U1RRE5	68 aa		4.59	□□□□□ -1.67
SDCBP-208	ENST00000520228	TRBV6-4	A0A1B0GX49	114 aa		4.59	□□□□□ -1.67
SDCBP-208	ENST00000520228	TMEM250	H0YL14	139 aa		4.59	□□□□□ -1.67
SDCBP-208	ENST00000520228	CXCL1	P09341	107 aa		4.59	□□□□□ -1.67
SDCBP-208	ENST00000520228	SOHLH1	Q5JUK2	328 aa		4.59	□□□□□ -1.67
SDCBP-208	ENST00000520228	C9orf129	Q5T035	196 aa	Known RBP	4.59	□□□□□ -1.67
SDCBP-208	ENST00000520228	C1orf134	Q5TEV5	83 aa		4.59	□□□□□ -1.67
SDCBP-208	ENST00000520228	UFSP1	Q6NVU6	142 aa		4.59	□□□□□ -1.67
SDCBP-208	ENST00000520228	LYPD5	Q6UWN5	251 aa		4.59	□□□□□ -1.67
SDCBP-208	ENST00000520228	ZFP82	Q8N141	532 aa		4.59	□□□□□ -1.67
SDCBP-208	ENST00000520228	OR2D3	Q8NGH3	330 aa		4.59	□□□□□ -1.67
SDCBP-208	ENST00000520228	SAMD10	Q9BYL1	202 aa		4.59	□□□□□ -1.67
SDCBP-208	ENST00000520228	EIF5A2	Q9GZV4	153 aa	Known RBP	4.59	□□□□□ -1.67
SDCBP-208	ENST00000520228	MUC21	A0A0G2JKD1	596 aa		4.58	□□□□□ -1.68
SDCBP-208	ENST00000520228	MUC21	A0A140T8X8	626 aa		4.58	□□□□□ -1.68
SDCBP-208	ENST00000520228	XKRY2	A2RUG3	117 aa		4.58	□□□□□ -1.68
SDCBP-208	ENST00000520228	C19orf71	A6NCJ1	209 aa		4.58	□□□□□ -1.68
SDCBP-208	ENST00000520228		P01737	135 aa		4.58	□□□□□ -1.68
SDCBP-208	ENST00000520228	OR5AL1	P0C617	328 aa		4.58	□□□□□ -1.68
SDCBP-208	ENST00000520228	CEBPG	P53567	150 aa		4.58	□□□□□ -1.68
SDCBP-208	ENST00000520228	RPS20	P60866	119 aa	Known RBP	4.58	□□□□□ -1.68
SDCBP-208	ENST00000520228	RHOH	Q15669	191 aa		4.58	□□□□□ -1.68
SDCBP-208	ENST00000520228	TTC32	Q5I0X7	151 aa		4.58	□□□□□ -1.68
SDCBP-208	ENST00000520228	FAM74A4	Q5TZK3	123 aa		4.58	□□□□□ -1.68
SDCBP-208	ENST00000520228	SPANXN1	Q5VSR9	72 aa		4.58	□□□□□ -1.68
SDCBP-208	ENST00000520228	TEX261	Q6UWH6	196 aa		4.58	□□□□□ -1.68
SDCBP-208	ENST00000520228	LINC00336	Q6ZUF6	198 aa		4.58	□□□□□ -1.68
SDCBP-208	ENST00000520228	OR10AG1	Q8NH19	301 aa		4.58	□□□□□ -1.68
SDCBP-208	ENST00000520228	SFRP2	Q96HF1	295 aa		4.58	□□□□□ -1.68
SDCBP-208	ENST00000520228	FAM210A	Q96ND0	272 aa		4.58	□□□□□ -1.68
SDCBP-208	ENST00000520228	KIR2DL4	Q99706	377 aa		4.58	□□□□□ -1.68
SDCBP-208	ENST00000520228	TPPP3	Q9BW30	176 aa		4.58	□□□□□ -1.68
SDCBP-208	ENST00000520228	HYDIN	Q4G0P3	5121 aa		4.58	□□□□□ -1.68
SDCBP-208	ENST00000520228	KMT2A	Q03164	3969 aa		4.57	□□□□□ -1.68
SDCBP-208	ENST00000520228	IGLV8-61	A0A075B6I0	122 aa		4.57	□□□□□ -1.68
SDCBP-208	ENST00000520228	RTL8C	O15255	209 aa		4.57	□□□□□ -1.68
SDCBP-208	ENST00000520228	SIVA1	O15304	175 aa		4.57	□□□□□ -1.68
SDCBP-208	ENST00000520228	SNAI2	O43623	268 aa		4.57	□□□□□ -1.68
SDCBP-208	ENST00000520228	CRYGD	P07320	174 aa		4.57	□□□□□ -1.68
SDCBP-208	ENST00000520228	GZMB	P10144	247 aa		4.57	□□□□□ -1.68
SDCBP-208	ENST00000520228	FER1L6-AS1	Q8NA97	138 aa		4.57	□□□□□ -1.68
SDCBP-208	ENST00000520228		F2Z2F3	143 aa		4.56	□□□□□ -1.68
SDCBP-208	ENST00000520228		K7EN84	100 aa		4.56	□□□□□ -1.68
SDCBP-208	ENST00000520228	NDUFS6	O75380	124 aa	Known RBP	4.56	□□□□□ -1.68
SDCBP-208	ENST00000520228	SRP19	P09132	144 aa	Known RBP	4.56	□□□□□ -1.68
SDCBP-208	ENST00000520228	C6orf223	Q8N319	242 aa		4.56	□□□□□ -1.68
SDCBP-208	ENST00000520228	C14orf178	Q8N769	122 aa	Predicted RBP	4.56	□□□□□ -1.68
SDCBP-208	ENST00000520228	ATP6V0E2	Q8NHE4	81 aa		4.56	□□□□□ -1.68
SDCBP-208	ENST00000520228	SMIM7	Q9BQ49	75 aa		4.56	□□□□□ -1.68
SDCBP-208	ENST00000520228	RNASE7	Q9H1E1	156 aa	Known RBP	4.56	□□□□□ -1.68
SDCBP-208	ENST00000520228	RPP21	Q9H633	154 aa	Known RBP	4.56	□□□□□ -1.68
SDCBP-208	ENST00000520228	MUC4	Q99102	2169 aa		4.55	□□□□□ -1.68
SDCBP-208	ENST00000520228	TRAV8-6	A0A0B4J262	113 aa		4.55	□□□□□ -1.68
SDCBP-208	ENST00000520228	ZNF727	A8MUV8	499 aa		4.55	□□□□□ -1.68
SDCBP-208	ENST00000520228	IGLC6	P0CF74	106 aa		4.55	□□□□□ -1.68
SDCBP-208	ENST00000520228	SMIM17	P0DL12	118 aa		4.55	□□□□□ -1.68
SDCBP-208	ENST00000520228	RAB4B	P61018	213 aa		4.55	□□□□□ -1.68
SDCBP-208	ENST00000520228	CACNG7	P62955	275 aa		4.55	□□□□□ -1.68
SDCBP-208	ENST00000520228	PEA15	Q15121	130 aa		4.55	□□□□□ -1.68
SDCBP-208	ENST00000520228	ZNF56	Q15929	161 aa		4.55	□□□□□ -1.68
SDCBP-208	ENST00000520228	PRR4	Q16378	134 aa		4.55	□□□□□ -1.68
SDCBP-208	ENST00000520228	LYZL1	Q6UWQ5	148 aa		4.55	□□□□□ -1.68
SDCBP-208	ENST00000520228	WFDC10B	Q8IUB3	73 aa		4.55	□□□□□ -1.68
SDCBP-208	ENST00000520228	AP1S3	Q96PC3	154 aa		4.55	□□□□□ -1.68
SDCBP-208	ENST00000520228	GTSF1L	Q9H1H1	148 aa		4.55	□□□□□ -1.68
SDCBP-208	ENST00000520228	LY96	Q9Y6Y9	160 aa		4.55	□□□□□ -1.68
SDCBP-208	ENST00000520228	TRBV10-1	A0A0K0K1A3	114 aa		4.54	□□□□□ -1.68
SDCBP-208	ENST00000520228		C9JQL5	133 aa		4.54	□□□□□ -1.68
SDCBP-208	ENST00000520228		K7EP13	123 aa		4.54	□□□□□ -1.68
SDCBP-208	ENST00000520228	GATC	O43716	136 aa	Known RBP	4.54	□□□□□ -1.68
SDCBP-208	ENST00000520228	EVI2A	P22794	236 aa		4.54	□□□□□ -1.68
SDCBP-208	ENST00000520228	TMEM241	Q24JQ0	296 aa		4.54	□□□□□ -1.68
SDCBP-208	ENST00000520228	FAM74A3	Q4VXF1	159 aa		4.54	□□□□□ -1.68
SDCBP-208	ENST00000520228	OR10J3	Q5JRS4	329 aa		4.54	□□□□□ -1.68
SDCBP-208	ENST00000520228	LCE3E	Q5T5B0	92 aa		4.54	□□□□□ -1.68
SDCBP-208	ENST00000520228	LELP1	Q5T871	98 aa		4.54	□□□□□ -1.68
SDCBP-208	ENST00000520228	FAM231D	Q6ZW35	169 aa		4.54	□□□□□ -1.68
SDCBP-208	ENST00000520228	LINC01551	Q86U37	167 aa		4.54	□□□□□ -1.68
SDCBP-208	ENST00000520228	TRBV7-3	A0A075B6L6	115 aa		4.53	□□□□□ -1.68
SDCBP-208	ENST00000520228		A0A087WWC5	75 aa		4.53	□□□□□ -1.68
SDCBP-208	ENST00000520228		A8MWL6	223 aa		4.53	□□□□□ -1.68
SDCBP-208	ENST00000520228		F8WDY8	70 aa		4.53	□□□□□ -1.68
SDCBP-208	ENST00000520228	SERF1A	O75920	110 aa		4.53	□□□□□ -1.68

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