RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 CNFNQ9BYD5 112 aa7.98□□□□□ -1.13
CSMD1-205ENST00000519623 FAT3Q8TDW7 4589 aa7.97□□□□□ -1.13
CSMD1-205ENST00000519623 SLPIP03973 132 aa7.97□□□□□ -1.13
CSMD1-205ENST00000519623 CTRLP40313 264 aa7.97□□□□□ -1.13
CSMD1-205ENST00000519623 CNBPP62633 177 aaKnown RBP7.97□□□□□ -1.13
CSMD1-205ENST00000519623 SLC51BQ86UW2 128 aa7.97□□□□□ -1.13
CSMD1-205ENST00000519623 TCTE3Q8IZS6 198 aa7.97□□□□□ -1.13
CSMD1-205ENST00000519623 OCC1Q8TAD7 63 aa7.97□□□□□ -1.13
CSMD1-205ENST00000519623 K7EN84 100 aa7.96□□□□□ -1.14
CSMD1-205ENST00000519623 HNRNPA3P51991 378 aaKnown RBP7.96□□□□□ -1.14
CSMD1-205ENST00000519623 RPL37AP61513 92 aaKnown RBP7.96□□□□□ -1.14
CSMD1-205ENST00000519623 TWIST1Q15672 202 aa7.96□□□□□ -1.14
CSMD1-205ENST00000519623 GATD1Q8NB37 220 aa7.96□□□□□ -1.14
CSMD1-205ENST00000519623 hDV102S1A0JD36 115 aa7.95□□□□□ -1.14
CSMD1-205ENST00000519623 TAGLN2P37802 199 aaKnown RBP7.95□□□□□ -1.14
CSMD1-205ENST00000519623 CIRBPQ14011 172 aaKnown RBP7.95□□□□□ -1.14
CSMD1-205ENST00000519623 RNASE7Q9H1E1 156 aaKnown RBP7.95□□□□□ -1.14
CSMD1-205ENST00000519623 RPP21Q9H633 154 aaKnown RBP7.95□□□□□ -1.14
CSMD1-205ENST00000519623 TRAV26-2A0A0B4J265 109 aa7.94□□□□□ -1.14
CSMD1-205ENST00000519623 AMTP48728 403 aa7.94□□□□□ -1.14
CSMD1-205ENST00000519623 FOXA3P55318 350 aaPredicted RBP7.94□□□□□ -1.14
CSMD1-205ENST00000519623 COTL1Q14019 142 aa7.94□□□□□ -1.14
CSMD1-205ENST00000519623 SERTAD4-AS1Q5TG53 156 aa7.94□□□□□ -1.14
CSMD1-205ENST00000519623 GTSF1Q8WW33 167 aa7.94□□□□□ -1.14
CSMD1-205ENST00000519623 PKHD1L1Q86WI1 4243 aa7.94□□□□□ -1.14
CSMD1-205ENST00000519623 UBE2L6O14933 153 aa7.93□□□□□ -1.14
CSMD1-205ENST00000519623 Q6ZNX1 250 aa7.92□□□□□ -1.14
CSMD1-205ENST00000519623 RPL39LQ96EH5 51 aaKnown RBP7.92□□□□□ -1.14
CSMD1-205ENST00000519623 AP5S1Q9NUS5 200 aa7.92□□□□□ -1.14
CSMD1-205ENST00000519623 IGHV3-64A0A075B6Q5 118 aa7.91□□□□□ -1.14
CSMD1-205ENST00000519623 GAGE12HA6NDE8 117 aa7.91□□□□□ -1.14
CSMD1-205ENST00000519623 C15orf56Q8N910 161 aa7.91□□□□□ -1.14
CSMD1-205ENST00000519623 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.9□□□□□ -1.14
CSMD1-205ENST00000519623 TMEM250H0YL14 139 aa7.9□□□□□ -1.14
CSMD1-205ENST00000519623 NCR2O95944 276 aa7.9□□□□□ -1.14
CSMD1-205ENST00000519623 CHTF8P0CG12 524 aa7.9□□□□□ -1.14
CSMD1-205ENST00000519623 FAM231DQ6ZW35 169 aa7.9□□□□□ -1.14
CSMD1-205ENST00000519623 LYPD6BQ8NI32 183 aa7.9□□□□□ -1.14
CSMD1-205ENST00000519623 A0A087WYN8 130 aa7.89□□□□□ -1.15
CSMD1-205ENST00000519623 IGKV3OR2-268A0A0C4DH90 116 aa7.89□□□□□ -1.15
CSMD1-205ENST00000519623 FAM231BA6NCW3 169 aa7.89□□□□□ -1.15
CSMD1-205ENST00000519623 SDHAF1A6NFY7 115 aa7.89□□□□□ -1.15
CSMD1-205ENST00000519623 H7C423 109 aa7.89□□□□□ -1.15
CSMD1-205ENST00000519623 GATCO43716 136 aaKnown RBP7.89□□□□□ -1.15
CSMD1-205ENST00000519623 CFAP161Q6P656 301 aa7.89□□□□□ -1.15
CSMD1-205ENST00000519623 TEX261Q6UWH6 196 aa7.89□□□□□ -1.15
CSMD1-205ENST00000519623 SPACA4Q8TDM5 124 aa7.89□□□□□ -1.15
CSMD1-205ENST00000519623 DPH3Q96FX2 82 aa7.89□□□□□ -1.15
CSMD1-205ENST00000519623 RNF185Q96GF1 192 aa7.89□□□□□ -1.15
CSMD1-205ENST00000519623 HMCN2Q8NDA2 5059 aa7.88□□□□□ -1.15
CSMD1-205ENST00000519623 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.88□□□□□ -1.15
CSMD1-205ENST00000519623 IGKV2-29A2NJV5 120 aaPredicted RBP7.88□□□□□ -1.15
CSMD1-205ENST00000519623 A8MWL6 223 aa7.88□□□□□ -1.15
CSMD1-205ENST00000519623 GAS8-AS1O95177 125 aa7.88□□□□□ -1.15
CSMD1-205ENST00000519623 FGF6P10767 208 aa7.88□□□□□ -1.15
CSMD1-205ENST00000519623 BLOC1S1P78537 153 aa7.88□□□□□ -1.15
CSMD1-205ENST00000519623 AMMECR1LQ6DCA0 310 aa7.88□□□□□ -1.15
CSMD1-205ENST00000519623 ALKAL2Q6UX46 152 aa7.88□□□□□ -1.15
CSMD1-205ENST00000519623 SMIM15Q7Z3B0 74 aa7.88□□□□□ -1.15
CSMD1-205ENST00000519623 CHCHD10Q8WYQ3 142 aaPredicted RBP7.88□□□□□ -1.15
CSMD1-205ENST00000519623 PLAC8Q9NZF1 115 aa7.88□□□□□ -1.15
CSMD1-205ENST00000519623 TRBV6-5A0A0K0K1A5 114 aa7.87□□□□□ -1.15
CSMD1-205ENST00000519623 MT1HL1P0DM35 61 aa7.87□□□□□ -1.15
CSMD1-205ENST00000519623 RPS10P46783 165 aaKnown RBP7.87□□□□□ -1.15
CSMD1-205ENST00000519623 COX6A2Q02221 97 aa7.87□□□□□ -1.15
CSMD1-205ENST00000519623 RNASEKQ6P5S7 137 aaKnown RBP7.87□□□□□ -1.15
CSMD1-205ENST00000519623 I3L3M4 83 aa7.86□□□□□ -1.15
CSMD1-205ENST00000519623 APCSP02743 223 aa7.86□□□□□ -1.15
CSMD1-205ENST00000519623 ESDP10768 282 aa7.86□□□□□ -1.15
CSMD1-205ENST00000519623 FOXI1Q12951 378 aa7.86□□□□□ -1.15
CSMD1-205ENST00000519623 HIGD2BQ4VC39 106 aa7.86□□□□□ -1.15
CSMD1-205ENST00000519623 CT83Q5H943 113 aa7.86□□□□□ -1.15
CSMD1-205ENST00000519623 Q6ZRU5 148 aa7.86□□□□□ -1.15
CSMD1-205ENST00000519623 PRSS3P2Q8NHM4 247 aa7.86□□□□□ -1.15
CSMD1-205ENST00000519623 GVQW2A0A096LPI5 108 aaPredicted RBP7.85□□□□□ -1.15
CSMD1-205ENST00000519623 TSHBP01222 138 aa7.85□□□□□ -1.15
CSMD1-205ENST00000519623 PMCHP20382 165 aa7.85□□□□□ -1.15
CSMD1-205ENST00000519623 OR5A1Q8NGJ0 315 aa7.85□□□□□ -1.15
CSMD1-205ENST00000519623 NDUFS6O75380 124 aaKnown RBP7.84□□□□□ -1.15
CSMD1-205ENST00000519623 ZNF25P17030 456 aaPredicted RBP7.84□□□□□ -1.15
CSMD1-205ENST00000519623 CEBPGP53567 150 aa7.84□□□□□ -1.15
CSMD1-205ENST00000519623 POLR2KP53803 58 aaKnown RBP7.84□□□□□ -1.15
CSMD1-205ENST00000519623 LINC01551Q86U37 167 aa7.84□□□□□ -1.15
CSMD1-205ENST00000519623 AKAP14Q86UN6 197 aa7.84□□□□□ -1.15
CSMD1-205ENST00000519623 TMEM191AQ9H0A3 160 aa7.84□□□□□ -1.15
CSMD1-205ENST00000519623 PLA2G2DQ9UNK4 145 aa7.84□□□□□ -1.15
CSMD1-205ENST00000519623 LINC00959A0A1B0GUT2 108 aa7.83□□□□□ -1.16
CSMD1-205ENST00000519623 A0A1B0GUT8 65 aa7.83□□□□□ -1.16
CSMD1-205ENST00000519623 PHOX2AO14813 284 aa7.83□□□□□ -1.16
CSMD1-205ENST00000519623 RAB4AP20338 218 aa7.83□□□□□ -1.16
CSMD1-205ENST00000519623 TSKUQ8WUA8 353 aa7.83□□□□□ -1.16
CSMD1-205ENST00000519623 ST20Q9HBF5 79 aa7.83□□□□□ -1.16
CSMD1-205ENST00000519623 HIGD1CA8MV81 97 aa7.82□□□□□ -1.16
CSMD1-205ENST00000519623 XCL1P47992 114 aa7.82□□□□□ -1.16
CSMD1-205ENST00000519623 MAJINQ3KP22 176 aa7.82□□□□□ -1.16
CSMD1-205ENST00000519623 MRPL52Q86TS9 123 aaKnown RBP7.82□□□□□ -1.16
CSMD1-205ENST00000519623 TMEM101Q96IK0 257 aa7.82□□□□□ -1.16
CSMD1-205ENST00000519623 BTF3L4Q96K17 158 aa7.82□□□□□ -1.16
CSMD1-205ENST00000519623 FAM210AQ96ND0 272 aa7.82□□□□□ -1.16
CSMD1-205ENST00000519623 SMIM7Q9BQ49 75 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms