RNA–Protein interactions for RNA: ENST00000517215.1

RNU6-1238P-201, Transcript of RNA, U6 small nuclear 1238, pseudogene, humanhuman

BASIC

Gene RNU6-1238P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1238P-201ENST00000517215 CEP250Q9BV73 2442 aa-2.45□□□□□ -2.8
RNU6-1238P-201ENST00000517215 MED23Q9ULK4 1368 aa-2.46□□□□□ -2.8
RNU6-1238P-201ENST00000517215 PRDM15P57071 1507 aaPredicted RBP-2.46□□□□□ -2.8
RNU6-1238P-201ENST00000517215 MAP1LC3B2A6NCE7 125 aa-2.46□□□□□ -2.8
RNU6-1238P-201ENST00000517215 LINC01546A6NGU7 62 aa-2.46□□□□□ -2.8
RNU6-1238P-201ENST00000517215 FTCDNL1E5RQL4 147 aa-2.46□□□□□ -2.8
RNU6-1238P-201ENST00000517215 APOA1P02647 267 aa-2.46□□□□□ -2.8
RNU6-1238P-201ENST00000517215 APOC3P02656 99 aa-2.46□□□□□ -2.8
RNU6-1238P-201ENST00000517215 TPPP2P59282 170 aa-2.46□□□□□ -2.8
RNU6-1238P-201ENST00000517215 HSD17B12Q53GQ0 312 aa-2.46□□□□□ -2.8
RNU6-1238P-201ENST00000517215 PPP1R42Q7Z4L9 355 aa-2.46□□□□□ -2.8
RNU6-1238P-201ENST00000517215 OR51D1Q8NGF3 324 aa-2.46□□□□□ -2.8
RNU6-1238P-201ENST00000517215 OTOSQ8NHW6 89 aa-2.46□□□□□ -2.8
RNU6-1238P-201ENST00000517215 DYNLRB2Q8TF09 96 aa-2.46□□□□□ -2.8
RNU6-1238P-201ENST00000517215 SMIM19Q96E16 107 aa-2.46□□□□□ -2.8
RNU6-1238P-201ENST00000517215 RNASE7Q9H1E1 156 aaKnown RBP-2.46□□□□□ -2.8
RNU6-1238P-201ENST00000517215 SLC35B3Q9H1N7 401 aa-2.46□□□□□ -2.8
RNU6-1238P-201ENST00000517215 CHMP5Q9NZZ3 219 aa-2.46□□□□□ -2.8
RNU6-1238P-201ENST00000517215 MBD5Q9P267 1494 aa-2.46□□□□□ -2.8
RNU6-1238P-201ENST00000517215 A0A0G2JMZ2 1700 aa-2.47□□□□□ -2.8
RNU6-1238P-201ENST00000517215 TIAM2Q8IVF5 1701 aa-2.47□□□□□ -2.8
RNU6-1238P-201ENST00000517215 CEP170BQ9Y4F5 1589 aaPredicted RBP-2.47□□□□□ -2.8
RNU6-1238P-201ENST00000517215 TRAV16A0A0A6YYK6 109 aaPredicted RBP-2.47□□□□□ -2.8
RNU6-1238P-201ENST00000517215 FAM236DA0A1B0GTK5 79 aa-2.47□□□□□ -2.8
RNU6-1238P-201ENST00000517215 A0A1B0GW15 77 aa-2.47□□□□□ -2.8
RNU6-1238P-201ENST00000517215 TMEM114B3SHH9 223 aa-2.47□□□□□ -2.8
RNU6-1238P-201ENST00000517215 WRBO00258 174 aa-2.47□□□□□ -2.8
RNU6-1238P-201ENST00000517215 OCM2P0CE71 109 aa-2.47□□□□□ -2.8
RNU6-1238P-201ENST00000517215 FAM236CP0DP71 79 aa-2.47□□□□□ -2.8
RNU6-1238P-201ENST00000517215 BCAP31P51572 246 aa-2.47□□□□□ -2.8
RNU6-1238P-201ENST00000517215 POLR2FP61218 127 aaKnown RBP-2.47□□□□□ -2.8
RNU6-1238P-201ENST00000517215 RRAS2P62070 204 aaPredicted RBP-2.47□□□□□ -2.8
RNU6-1238P-201ENST00000517215 FDCSPQ8NFU4 85 aa-2.47□□□□□ -2.8
RNU6-1238P-201ENST00000517215 GINS3Q9BRX5 216 aa-2.47□□□□□ -2.8
RNU6-1238P-201ENST00000517215 NT5C3AQ9H0P0 336 aa-2.47□□□□□ -2.8
RNU6-1238P-201ENST00000517215 RAPGEF6Q8TEU7 1601 aa-2.47□□□□□ -2.81
RNU6-1238P-201ENST00000517215 PXDNQ92626 1479 aa-2.47□□□□□ -2.81
RNU6-1238P-201ENST00000517215 PIK3C2AO00443 1686 aa-2.47□□□□□ -2.81
RNU6-1238P-201ENST00000517215 A0A1W2PPV4 95 aa-2.48□□□□□ -2.81
RNU6-1238P-201ENST00000517215 IFNA7P01567 189 aa-2.48□□□□□ -2.81
RNU6-1238P-201ENST00000517215 IFNA14P01570 189 aa-2.48□□□□□ -2.81
RNU6-1238P-201ENST00000517215 TRGC2P03986 189 aa-2.48□□□□□ -2.81
RNU6-1238P-201ENST00000517215 CDKN2CP42773 168 aa-2.48□□□□□ -2.81
RNU6-1238P-201ENST00000517215 ZNHIT3Q15649 155 aaPredicted RBP-2.48□□□□□ -2.81
RNU6-1238P-201ENST00000517215 NMSQ5H8A3 153 aa-2.48□□□□□ -2.81
RNU6-1238P-201ENST00000517215 DCUN1D2Q6PH85 259 aa-2.48□□□□□ -2.81
RNU6-1238P-201ENST00000517215 FAM223AQ8IWN6 122 aa-2.48□□□□□ -2.81
RNU6-1238P-201ENST00000517215 OTUD6BQ8N6M0 293 aa-2.48□□□□□ -2.81
RNU6-1238P-201ENST00000517215 OR5H6Q8NGV6 325 aa-2.48□□□□□ -2.81
RNU6-1238P-201ENST00000517215 NEK7Q8TDX7 302 aa-2.48□□□□□ -2.81
RNU6-1238P-201ENST00000517215 C10orf82Q8WW14 230 aa-2.48□□□□□ -2.81
RNU6-1238P-201ENST00000517215 PRO3102Q9H379 93 aa-2.48□□□□□ -2.81
RNU6-1238P-201ENST00000517215 PARVBQ9HBI1 364 aa-2.48□□□□□ -2.81
RNU6-1238P-201ENST00000517215 IL20Q9NYY1 176 aa-2.48□□□□□ -2.81
RNU6-1238P-201ENST00000517215 COX16Q9P0S2 106 aa-2.48□□□□□ -2.81
RNU6-1238P-201ENST00000517215 MRM2Q9UI43 246 aaKnown RBP-2.48□□□□□ -2.81
RNU6-1238P-201ENST00000517215 LINC00312Q9Y6C7 94 aa-2.48□□□□□ -2.81
RNU6-1238P-201ENST00000517215 V9GYH0 126 aa-2.48□□□□□ -2.81
RNU6-1238P-201ENST00000517215 PSME4Q14997 1843 aa-2.48□□□□□ -2.81
RNU6-1238P-201ENST00000517215 KIF21AQ7Z4S6 1674 aa-2.48□□□□□ -2.81
RNU6-1238P-201ENST00000517215 QRICH2Q9H0J4 1663 aa-2.48□□□□□ -2.81
RNU6-1238P-201ENST00000517215 EVC2Q86UK5 1308 aa-2.48□□□□□ -2.81
RNU6-1238P-201ENST00000517215 DLC1Q96QB1 1528 aa-2.48□□□□□ -2.81
RNU6-1238P-201ENST00000517215 PRDM2Q13029 1718 aa-2.48□□□□□ -2.81
RNU6-1238P-201ENST00000517215 ABCC11Q96J66 1382 aa-2.49□□□□□ -2.81
RNU6-1238P-201ENST00000517215 CALB1P05937 261 aa-2.49□□□□□ -2.81
RNU6-1238P-201ENST00000517215 PLGLB1Q02325 96 aa-2.49□□□□□ -2.81
RNU6-1238P-201ENST00000517215 OR8I2Q8N0Y5 310 aa-2.49□□□□□ -2.81
RNU6-1238P-201ENST00000517215 DEFB106AQ8N104 65 aa-2.49□□□□□ -2.81
RNU6-1238P-201ENST00000517215 C1orf109Q9NX04 203 aa-2.49□□□□□ -2.81
RNU6-1238P-201ENST00000517215 COPZ2Q9P299 210 aa-2.49□□□□□ -2.81
RNU6-1238P-201ENST00000517215 PYCARDQ9ULZ3 195 aa-2.49□□□□□ -2.81
RNU6-1238P-201ENST00000517215 LINC01558Q9Y6Z2 57 aa-2.49□□□□□ -2.81
RNU6-1238P-201ENST00000517215 NUP210LQ5VU65 1888 aa-2.5□□□□□ -2.81
RNU6-1238P-201ENST00000517215 MYH1P12882 1939 aa-2.5□□□□□ -2.81
RNU6-1238P-201ENST00000517215 MYH6P13533 1939 aa-2.5□□□□□ -2.81
RNU6-1238P-201ENST00000517215 NLRP1Q9C000 1473 aa-2.5□□□□□ -2.81
RNU6-1238P-201ENST00000517215 CASQ2O14958 399 aaPredicted RBP-2.5□□□□□ -2.81
RNU6-1238P-201ENST00000517215 SSNA1O43805 119 aa-2.5□□□□□ -2.81
RNU6-1238P-201ENST00000517215 LSM3P62310 102 aaKnown RBP-2.5□□□□□ -2.81
RNU6-1238P-201ENST00000517215 COX6B2Q6YFQ2 88 aa-2.5□□□□□ -2.81
RNU6-1238P-201ENST00000517215 CNPY4Q8N129 248 aa-2.5□□□□□ -2.81
RNU6-1238P-201ENST00000517215 BTF3L4Q96K17 158 aa-2.5□□□□□ -2.81
RNU6-1238P-201ENST00000517215 FAM167A-AS1Q96KT0 104 aa-2.5□□□□□ -2.81
RNU6-1238P-201ENST00000517215 RPRMQ9NS64 109 aa-2.5□□□□□ -2.81
RNU6-1238P-201ENST00000517215 LSM5Q9Y4Y9 91 aaKnown RBP-2.5□□□□□ -2.81
RNU6-1238P-201ENST00000517215 LOC100130705A0A1B0GUX0 176 aa-2.51□□□□□ -2.81
RNU6-1238P-201ENST00000517215 PFDN6O15212 129 aa-2.51□□□□□ -2.81
RNU6-1238P-201ENST00000517215 NDUFA3O95167 84 aa-2.51□□□□□ -2.81
RNU6-1238P-201ENST00000517215 IFNA17P01571 189 aa-2.51□□□□□ -2.81
RNU6-1238P-201ENST00000517215 SEC11AP67812 179 aa-2.51□□□□□ -2.81
RNU6-1238P-201ENST00000517215 RPL19P84098 196 aaKnown RBP-2.51□□□□□ -2.81
RNU6-1238P-201ENST00000517215 DEFB136Q30KP8 78 aa-2.51□□□□□ -2.81
RNU6-1238P-201ENST00000517215 C5orf38Q86SI9 138 aa-2.51□□□□□ -2.81
RNU6-1238P-201ENST00000517215 BORCS7Q96B45 105 aa-2.51□□□□□ -2.81
RNU6-1238P-201ENST00000517215 DCUN1D1Q96GG9 259 aa-2.51□□□□□ -2.81
RNU6-1238P-201ENST00000517215 OR2J1Q9GZK6 312 aa-2.51□□□□□ -2.81
RNU6-1238P-201ENST00000517215 TECPR2O15040 1411 aa-2.51□□□□□ -2.81
RNU6-1238P-201ENST00000517215 PRG4Q92954 1404 aaPredicted RBP-2.51□□□□□ -2.81
RNU6-1238P-201ENST00000517215 CUX1P39880 1505 aa-2.52□□□□□ -2.81
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms