RNA–Protein interactions for RNA: ENST00000515662.6

THUMPD3-210, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-210ENST00000515662 IGIPA6NJ69 53 aa11.1□□□□□ -0.63
THUMPD3-210ENST00000515662 RPL39P62891 51 aaKnown RBP11.1□□□□□ -0.63
THUMPD3-210ENST00000515662 DAZ2Q13117 558 aaKnown RBP11.1□□□□□ -0.63
THUMPD3-210ENST00000515662 TNFRSF18Q9Y5U5 241 aa11.1□□□□□ -0.63
THUMPD3-210ENST00000515662 NOP10Q9NPE3 64 aaKnown RBP11.1□□□□□ -0.63
THUMPD3-210ENST00000515662 H3BUT2 72 aa11.09□□□□□ -0.63
THUMPD3-210ENST00000515662 WFDC9Q8NEX5 89 aa11.09□□□□□ -0.63
THUMPD3-210ENST00000515662 SEC11AP67812 179 aa11.09□□□□□ -0.63
THUMPD3-210ENST00000515662 RRN3P1Q2M238 152 aa11.09□□□□□ -0.63
THUMPD3-210ENST00000515662 GAGE12BA1L429 117 aa11.08□□□□□ -0.64
THUMPD3-210ENST00000515662 F8VRH5 84 aa11.08□□□□□ -0.64
THUMPD3-210ENST00000515662 PLNP26678 52 aa11.08□□□□□ -0.64
THUMPD3-210ENST00000515662 TMEM141Q96I45 108 aa11.08□□□□□ -0.64
THUMPD3-210ENST00000515662 ZNF479Q96JC4 524 aa11.08□□□□□ -0.64
THUMPD3-210ENST00000515662 DNAJC30Q96LL9 226 aa11.08□□□□□ -0.64
THUMPD3-210ENST00000515662 TIMM17AQ99595 171 aa11.08□□□□□ -0.64
THUMPD3-210ENST00000515662 CHTOPQ9Y3Y2 248 aaKnown RBP11.08□□□□□ -0.64
THUMPD3-210ENST00000515662 PRSS29PA6NIE9 313 aa11.07□□□□□ -0.64
THUMPD3-210ENST00000515662 HSD52Q0P140 79 aa11.07□□□□□ -0.64
THUMPD3-210ENST00000515662 OCIAD2Q56VL3 154 aa11.07□□□□□ -0.64
THUMPD3-210ENST00000515662 C20orf203Q8NBC4 194 aa11.07□□□□□ -0.64
THUMPD3-210ENST00000515662 TRAV4A0A0B4J268 109 aa11.06□□□□□ -0.64
THUMPD3-210ENST00000515662 KRTAP24-1Q3LI83 254 aa11.06□□□□□ -0.64
THUMPD3-210ENST00000515662 OVOL2Q9BRP0 275 aa11.06□□□□□ -0.64
THUMPD3-210ENST00000515662 GAGE10A6NGK3 116 aa11.06□□□□□ -0.64
THUMPD3-210ENST00000515662 C9orf118A6NHY6 69 aa11.05□□□□□ -0.64
THUMPD3-210ENST00000515662 K7ERJ3 54 aa11.05□□□□□ -0.64
THUMPD3-210ENST00000515662 ZC2HC1BQ5TFG8 222 aa11.05□□□□□ -0.64
THUMPD3-210ENST00000515662 CYSRT1A8MQ03 144 aa11.05□□□□□ -0.64
THUMPD3-210ENST00000515662 GCSHP23434 173 aa11.05□□□□□ -0.64
THUMPD3-210ENST00000515662 A6NDN8 102 aa11.04□□□□□ -0.64
THUMPD3-210ENST00000515662 H3BRM9 83 aa11.04□□□□□ -0.64
THUMPD3-210ENST00000515662 WIPF1O43516 503 aa11.04□□□□□ -0.64
THUMPD3-210ENST00000515662 FXYD2P54710 66 aa11.04□□□□□ -0.64
THUMPD3-210ENST00000515662 GAGE7O76087 117 aa11.04□□□□□ -0.64
THUMPD3-210ENST00000515662 GAGE12FP0CL80 117 aa11.04□□□□□ -0.64
THUMPD3-210ENST00000515662 GAGE12GP0CL81 117 aa11.04□□□□□ -0.64
THUMPD3-210ENST00000515662 GAGE12IP0CL82 117 aa11.04□□□□□ -0.64
THUMPD3-210ENST00000515662 PMVKQ15126 192 aa11.04□□□□□ -0.64
THUMPD3-210ENST00000515662 SIVA1O15304 175 aa11.02□□□□□ -0.65
THUMPD3-210ENST00000515662 MAPKAPK5-AS1Q8N8E1 139 aa11.02□□□□□ -0.65
THUMPD3-210ENST00000515662 NOTCH3Q9UM47 2321 aa11.02□□□□□ -0.65
THUMPD3-210ENST00000515662 TRGV2A0A075B6R0 118 aa11.02□□□□□ -0.65
THUMPD3-210ENST00000515662 K7EQD1 137 aa11.02□□□□□ -0.65
THUMPD3-210ENST00000515662 VPS25Q9BRG1 176 aa11.02□□□□□ -0.65
THUMPD3-210ENST00000515662 CHAC1Q9BUX1 264 aa11.02□□□□□ -0.65
THUMPD3-210ENST00000515662 TRBV10-1A0A0K0K1A3 114 aa11.01□□□□□ -0.65
THUMPD3-210ENST00000515662 PHLDA1Q8WV24 401 aaPredicted RBP11.01□□□□□ -0.65
THUMPD3-210ENST00000515662 OPRPNQ99935 248 aaPredicted RBP11.01□□□□□ -0.65
THUMPD3-210ENST00000515662 BAHCC1Q9P281 2608 aa11.01□□□□□ -0.65
THUMPD3-210ENST00000515662 IGLV4-69A0A075B6H9 119 aa11.01□□□□□ -0.65
THUMPD3-210ENST00000515662 TRBV25-1A0A075B6N4 114 aa11.01□□□□□ -0.65
THUMPD3-210ENST00000515662 IGHV3-38A0A0C4DH36 116 aa11.01□□□□□ -0.65
THUMPD3-210ENST00000515662 EMP1P54849 157 aa11.01□□□□□ -0.65
THUMPD3-210ENST00000515662 SLC25A29Q8N8R3 303 aa11.01□□□□□ -0.65
THUMPD3-210ENST00000515662 ZNRF2Q8NHG8 242 aa11.01□□□□□ -0.65
THUMPD3-210ENST00000515662 CHCHD7Q9BUK0 85 aa11.01□□□□□ -0.65
THUMPD3-210ENST00000515662 X6R8D5 127 aa11.01□□□□□ -0.65
THUMPD3-210ENST00000515662 TRBV7-3A0A075B6L6 115 aa11□□□□□ -0.65
THUMPD3-210ENST00000515662 K7EP34 96 aa11□□□□□ -0.65
THUMPD3-210ENST00000515662 KIR2DL5BQ8NHK3 375 aa11□□□□□ -0.65
THUMPD3-210ENST00000515662 CIDEAO60543 219 aa10.99□□□□□ -0.65
THUMPD3-210ENST00000515662 COTL1Q14019 142 aa10.99□□□□□ -0.65
THUMPD3-210ENST00000515662 PYGO1Q9Y3Y4 419 aa10.99□□□□□ -0.65
THUMPD3-210ENST00000515662 A0A1W2PPM0 123 aa10.99□□□□□ -0.65
THUMPD3-210ENST00000515662 SMIM9A6NGZ8 99 aa10.99□□□□□ -0.65
THUMPD3-210ENST00000515662 TRRAPQ9Y4A5 3859 aa10.99□□□□□ -0.65
THUMPD3-210ENST00000515662 IGLV4-3A0A075B6K6 122 aa10.98□□□□□ -0.65
THUMPD3-210ENST00000515662 APOC4P55056 127 aa10.98□□□□□ -0.65
THUMPD3-210ENST00000515662 RPL36AP83881 106 aaKnown RBP10.98□□□□□ -0.65
THUMPD3-210ENST00000515662 RPL36ALQ969Q0 106 aaKnown RBP10.98□□□□□ -0.65
THUMPD3-210ENST00000515662 SPCS1Q9Y6A9 102 aa10.98□□□□□ -0.65
THUMPD3-210ENST00000515662 C11orf86A6NJI1 115 aa10.98□□□□□ -0.65
THUMPD3-210ENST00000515662 PAPPA-AS1Q5QFB9 102 aa10.98□□□□□ -0.65
THUMPD3-210ENST00000515662 GTF2H5Q6ZYL4 71 aa10.97□□□□□ -0.65
THUMPD3-210ENST00000515662 C3orf56Q8N813 242 aa10.97□□□□□ -0.65
THUMPD3-210ENST00000515662 FAM104AQ969W3 186 aa10.97□□□□□ -0.65
THUMPD3-210ENST00000515662 FBN1P35555 2871 aaKnown RBP10.97□□□□□ -0.65
THUMPD3-210ENST00000515662 NHP2Q9NX24 153 aaKnown RBP10.97□□□□□ -0.65
THUMPD3-210ENST00000515662 UBE2D3P61077 147 aa10.96□□□□□ -0.65
THUMPD3-210ENST00000515662 UBE2D2P62837 147 aa10.96□□□□□ -0.65
THUMPD3-210ENST00000515662 PRIMA1Q86XR5 153 aa10.96□□□□□ -0.65
THUMPD3-210ENST00000515662 LINC00612Q8N6U2 182 aa10.96□□□□□ -0.65
THUMPD3-210ENST00000515662 VCX2Q9H322 139 aa10.96□□□□□ -0.65
THUMPD3-210ENST00000515662 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.96□□□□□ -0.66
THUMPD3-210ENST00000515662 TRGV4A0A0C4DH28 118 aa10.96□□□□□ -0.66
THUMPD3-210ENST00000515662 TRBV6-4A0A1B0GX49 114 aa10.96□□□□□ -0.66
THUMPD3-210ENST00000515662 IGKV2-29A2NJV5 120 aaPredicted RBP10.96□□□□□ -0.66
THUMPD3-210ENST00000515662 SMIM13P0DJ93 91 aa10.96□□□□□ -0.66
THUMPD3-210ENST00000515662 DEFB135Q30KP9 77 aa10.96□□□□□ -0.66
THUMPD3-210ENST00000515662 SAMD5Q5TGI4 173 aa10.96□□□□□ -0.66
THUMPD3-210ENST00000515662 CEMP1Q6PRD7 247 aaPredicted RBP10.96□□□□□ -0.66
THUMPD3-210ENST00000515662 DAZ4Q86SG3 579 aaKnown RBP10.96□□□□□ -0.66
THUMPD3-210ENST00000515662 DAZ3Q9NR90 486 aaKnown RBP10.96□□□□□ -0.66
THUMPD3-210ENST00000515662 UBE2D4Q9Y2X8 147 aa10.96□□□□□ -0.66
THUMPD3-210ENST00000515662 GAGE12JA6NER3 117 aa10.95□□□□□ -0.66
THUMPD3-210ENST00000515662 GAGE4Q13068 117 aa10.95□□□□□ -0.66
THUMPD3-210ENST00000515662 GAGE5Q13069 117 aa10.95□□□□□ -0.66
THUMPD3-210ENST00000515662 FHL2Q14192 279 aa10.95□□□□□ -0.66
THUMPD3-210ENST00000515662 GAGE13Q4V321 117 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms