RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 IGLV10-54A0A075B6I4 117 aa8.89□□□□□ -0.99
TCOF1-215ENST00000515516 A8MWL6 223 aa8.89□□□□□ -0.99
TCOF1-215ENST00000515516 PRSS1P07477 247 aa8.89□□□□□ -0.99
TCOF1-215ENST00000515516 TEX261Q6UWH6 196 aa8.89□□□□□ -0.99
TCOF1-215ENST00000515516 GATD1Q8NB37 220 aa8.89□□□□□ -0.99
TCOF1-215ENST00000515516 CLRN3Q8NCR9 226 aa8.89□□□□□ -0.99
TCOF1-215ENST00000515516 DEFB104AQ8WTQ1 72 aa8.89□□□□□ -0.99
TCOF1-215ENST00000515516 EIF5A2Q9GZV4 153 aaKnown RBP8.89□□□□□ -0.99
TCOF1-215ENST00000515516 TRAV26-2A0A0B4J265 109 aa8.88□□□□□ -0.99
TCOF1-215ENST00000515516 J3QL48 77 aa8.88□□□□□ -0.99
TCOF1-215ENST00000515516 C20orf203Q8NBC4 194 aa8.88□□□□□ -0.99
TCOF1-215ENST00000515516 CIRBP-AS1Q8TBR5 109 aa8.88□□□□□ -0.99
TCOF1-215ENST00000515516 GTSF1Q8WW33 167 aa8.88□□□□□ -0.99
TCOF1-215ENST00000515516 IGLV4-60A0A075B6I1 120 aa8.87□□□□□ -0.99
TCOF1-215ENST00000515516 AMMECR1LQ6DCA0 310 aa8.87□□□□□ -0.99
TCOF1-215ENST00000515516 FAM231DQ6ZW35 169 aa8.87□□□□□ -0.99
TCOF1-215ENST00000515516 LYPD6BQ8NI32 183 aa8.87□□□□□ -0.99
TCOF1-215ENST00000515516 AP5S1Q9NUS5 200 aa8.87□□□□□ -0.99
TCOF1-215ENST00000515516 hDV102S1A0JD36 115 aa8.86□□□□□ -0.99
TCOF1-215ENST00000515516 NCR2O95944 276 aa8.86□□□□□ -0.99
TCOF1-215ENST00000515516 CT83Q5H943 113 aa8.86□□□□□ -0.99
TCOF1-215ENST00000515516 KRTAP26-1Q6PEX3 210 aa8.86□□□□□ -0.99
TCOF1-215ENST00000515516 SMIM7Q9BQ49 75 aa8.86□□□□□ -0.99
TCOF1-215ENST00000515516 C9orf163Q8N9P6 203 aa8.85□□□□□ -0.99
TCOF1-215ENST00000515516 SRRM2Q9UQ35 2752 aaKnown RBP8.84□□□□□ -0.99
TCOF1-215ENST00000515516 IGKV3OR2-268A0A0C4DH90 116 aa8.84□□□□□ -0.99
TCOF1-215ENST00000515516 ZNF727A8MUV8 499 aa8.84□□□□□ -0.99
TCOF1-215ENST00000515516 NDUFS6O75380 124 aaKnown RBP8.84□□□□□ -0.99
TCOF1-215ENST00000515516 APCSP02743 223 aa8.84□□□□□ -0.99
TCOF1-215ENST00000515516 PMCHP20382 165 aa8.84□□□□□ -0.99
TCOF1-215ENST00000515516 FOXA3P55318 350 aaPredicted RBP8.84□□□□□ -0.99
TCOF1-215ENST00000515516 RNASEKQ6P5S7 137 aaKnown RBP8.84□□□□□ -0.99
TCOF1-215ENST00000515516 CFAP161Q6P656 301 aa8.84□□□□□ -0.99
TCOF1-215ENST00000515516 RPL39LQ96EH5 51 aaKnown RBP8.84□□□□□ -0.99
TCOF1-215ENST00000515516 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.83□□□□□ -1
TCOF1-215ENST00000515516 SDHAF1A6NFY7 115 aa8.83□□□□□ -1
TCOF1-215ENST00000515516 H7C423 109 aa8.83□□□□□ -1
TCOF1-215ENST00000515516 I3L3M4 83 aa8.83□□□□□ -1
TCOF1-215ENST00000515516 TSKUQ8WUA8 353 aa8.83□□□□□ -1
TCOF1-215ENST00000515516 FAM210AQ96ND0 272 aa8.83□□□□□ -1
TCOF1-215ENST00000515516 GFRA4Q9GZZ7 299 aa8.83□□□□□ -1
TCOF1-215ENST00000515516 DMBT1Q9UGM3 2413 aaPredicted RBP8.82□□□□□ -1
TCOF1-215ENST00000515516 A0A1B0GUT8 65 aa8.82□□□□□ -1
TCOF1-215ENST00000515516 GAGE12HA6NDE8 117 aa8.82□□□□□ -1
TCOF1-215ENST00000515516 CNBPP62633 177 aaKnown RBP8.82□□□□□ -1
TCOF1-215ENST00000515516 LINC01551Q86U37 167 aa8.82□□□□□ -1
TCOF1-215ENST00000515516 DPH3Q96FX2 82 aa8.82□□□□□ -1
TCOF1-215ENST00000515516 TMEM101Q96IK0 257 aa8.82□□□□□ -1
TCOF1-215ENST00000515516 BTF3L4Q96K17 158 aa8.82□□□□□ -1
TCOF1-215ENST00000515516 ST20Q9HBF5 79 aa8.82□□□□□ -1
TCOF1-215ENST00000515516 IGHV3-64A0A075B6Q5 118 aa8.81□□□□□ -1
TCOF1-215ENST00000515516 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.81□□□□□ -1
TCOF1-215ENST00000515516 IGKV2-29A2NJV5 120 aaPredicted RBP8.81□□□□□ -1
TCOF1-215ENST00000515516 FAM231BA6NCW3 169 aa8.81□□□□□ -1
TCOF1-215ENST00000515516 HIGD1CA8MV81 97 aa8.81□□□□□ -1
TCOF1-215ENST00000515516 OSTCQ9NRP0 149 aa8.81□□□□□ -1
TCOF1-215ENST00000515516 TRBV6-5A0A0K0K1A5 114 aa8.8□□□□□ -1
TCOF1-215ENST00000515516 SRP19P09132 144 aaKnown RBP8.8□□□□□ -1
TCOF1-215ENST00000515516 FGF6P10767 208 aa8.8□□□□□ -1
TCOF1-215ENST00000515516 RPL37AP61513 92 aaKnown RBP8.8□□□□□ -1
TCOF1-215ENST00000515516 RIGQ13278 110 aa8.8□□□□□ -1
TCOF1-215ENST00000515516 SDIM1Q6ZPB5 146 aa8.8□□□□□ -1
TCOF1-215ENST00000515516 TMEM191AQ9H0A3 160 aa8.8□□□□□ -1
TCOF1-215ENST00000515516 FLG2Q5D862 2391 aaPredicted RBP8.79□□□□□ -1
TCOF1-215ENST00000515516 KRTAP29-1A8MX34 341 aaPredicted RBP8.79□□□□□ -1
TCOF1-215ENST00000515516 ZNF25P17030 456 aaPredicted RBP8.79□□□□□ -1
TCOF1-215ENST00000515516 TMEM241Q24JQ0 296 aa8.79□□□□□ -1
TCOF1-215ENST00000515516 FAM74A3Q4VXF1 159 aa8.79□□□□□ -1
TCOF1-215ENST00000515516 MRAP2Q96G30 205 aa8.79□□□□□ -1
TCOF1-215ENST00000515516 MYCBP2O75592 4640 aa8.78□□□□□ -1
TCOF1-215ENST00000515516 CHCHD10Q8WYQ3 142 aaPredicted RBP8.78□□□□□ -1
TCOF1-215ENST00000515516 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.78□□□□□ -1
TCOF1-215ENST00000515516 HERC1Q15751 4861 aa8.77□□□□□ -1.01
TCOF1-215ENST00000515516 PPP1R17O96001 155 aa8.77□□□□□ -1.01
TCOF1-215ENST00000515516 RAB4AP20338 218 aa8.77□□□□□ -1.01
TCOF1-215ENST00000515516 OR5A1Q8NGJ0 315 aa8.77□□□□□ -1.01
TCOF1-215ENST00000515516 TMEM242Q9NWH2 141 aa8.77□□□□□ -1.01
TCOF1-215ENST00000515516 PEA15Q15121 130 aa8.76□□□□□ -1.01
TCOF1-215ENST00000515516 AMN1Q8IY45 258 aa8.76□□□□□ -1.01
TCOF1-215ENST00000515516 RNF185Q96GF1 192 aa8.76□□□□□ -1.01
TCOF1-215ENST00000515516 NAT8BQ9UHF3 227 aa8.76□□□□□ -1.01
TCOF1-215ENST00000515516 V9GYV3 84 aa8.76□□□□□ -1.01
TCOF1-215ENST00000515516 VCYO14598 125 aa8.75□□□□□ -1.01
TCOF1-215ENST00000515516 GAS8-AS1O95177 125 aa8.75□□□□□ -1.01
TCOF1-215ENST00000515516 OXTP01178 125 aa8.75□□□□□ -1.01
TCOF1-215ENST00000515516 TSHBP01222 138 aa8.75□□□□□ -1.01
TCOF1-215ENST00000515516 SLPIP03973 132 aa8.75□□□□□ -1.01
TCOF1-215ENST00000515516 FCER1GP30273 86 aa8.75□□□□□ -1.01
TCOF1-215ENST00000515516 RPS10P46783 165 aaKnown RBP8.75□□□□□ -1.01
TCOF1-215ENST00000515516 KRTAP10-4P60372 401 aaPredicted RBP8.75□□□□□ -1.01
TCOF1-215ENST00000515516 SMAGPQ0VAQ4 97 aa8.75□□□□□ -1.01
TCOF1-215ENST00000515516 ADIRFQ15847 76 aa8.75□□□□□ -1.01
TCOF1-215ENST00000515516 HIGD2BQ4VC39 106 aa8.75□□□□□ -1.01
TCOF1-215ENST00000515516 C15orf56Q8N910 161 aa8.75□□□□□ -1.01
TCOF1-215ENST00000515516 NUP35Q8NFH5 326 aa8.75□□□□□ -1.01
TCOF1-215ENST00000515516 ISOC2Q96AB3 205 aa8.75□□□□□ -1.01
TCOF1-215ENST00000515516 NAT8Q9UHE5 227 aa8.75□□□□□ -1.01
TCOF1-215ENST00000515516 TRBV27A0A0K0K1C4 114 aa8.74□□□□□ -1.01
TCOF1-215ENST00000515516 A0A1B0GVG6 124 aa8.74□□□□□ -1.01
TCOF1-215ENST00000515516 PANO1I0J062 215 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms