RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 OSTCQ9NRP0 149 aa7.55□□□□□ -1.2
VCAN-212ENST00000515397 V9GYV3 84 aa7.55□□□□□ -1.2
VCAN-212ENST00000515397 HLA-DQA1P01909 254 aa7.54□□□□□ -1.2
VCAN-212ENST00000515397 AMTP48728 403 aa7.54□□□□□ -1.2
VCAN-212ENST00000515397 Q0VG73 95 aa7.54□□□□□ -1.2
VCAN-212ENST00000515397 COTL1Q14019 142 aa7.54□□□□□ -1.2
VCAN-212ENST00000515397 C20orf203Q8NBC4 194 aa7.54□□□□□ -1.2
VCAN-212ENST00000515397 ISOC2Q96AB3 205 aa7.54□□□□□ -1.2
VCAN-212ENST00000515397 COX11Q9Y6N1 276 aa7.54□□□□□ -1.2
VCAN-212ENST00000515397 DNAH8Q96JB1 4490 aa7.54□□□□□ -1.2
VCAN-212ENST00000515397 A0A1B0GUT8 65 aa7.53□□□□□ -1.2
VCAN-212ENST00000515397 SMKR1H3BMG3 65 aa7.53□□□□□ -1.2
VCAN-212ENST00000515397 PEA15Q15121 130 aa7.53□□□□□ -1.2
VCAN-212ENST00000515397 CT83Q5H943 113 aa7.53□□□□□ -1.2
VCAN-212ENST00000515397 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.52□□□□□ -1.21
VCAN-212ENST00000515397 IGKV3OR2-268A0A0C4DH90 116 aa7.52□□□□□ -1.21
VCAN-212ENST00000515397 IGKV2-29A2NJV5 120 aaPredicted RBP7.52□□□□□ -1.21
VCAN-212ENST00000515397 EPM2AB3EWF7 344 aa7.52□□□□□ -1.21
VCAN-212ENST00000515397 NDUFS6O75380 124 aaKnown RBP7.52□□□□□ -1.21
VCAN-212ENST00000515397 KRTAP26-1Q6PEX3 210 aa7.52□□□□□ -1.21
VCAN-212ENST00000515397 AMN1Q8IY45 258 aa7.52□□□□□ -1.21
VCAN-212ENST00000515397 NUP35Q8NFH5 326 aa7.52□□□□□ -1.21
VCAN-212ENST00000515397 BORCS7Q96B45 105 aa7.52□□□□□ -1.21
VCAN-212ENST00000515397 RNF185Q96GF1 192 aa7.52□□□□□ -1.21
VCAN-212ENST00000515397 PRR34Q9NV39 138 aa7.52□□□□□ -1.21
VCAN-212ENST00000515397 NAT8Q9UHE5 227 aa7.52□□□□□ -1.21
VCAN-212ENST00000515397 SDHAF1A6NFY7 115 aa7.51□□□□□ -1.21
VCAN-212ENST00000515397 USP17L23D6RBM5 183 aa7.51□□□□□ -1.21
VCAN-212ENST00000515397 UBE2L6O14933 153 aa7.51□□□□□ -1.21
VCAN-212ENST00000515397 NCR2O95944 276 aa7.51□□□□□ -1.21
VCAN-212ENST00000515397 RPS10P46783 165 aaKnown RBP7.51□□□□□ -1.21
VCAN-212ENST00000515397 PKIAP61925 76 aa7.51□□□□□ -1.21
VCAN-212ENST00000515397 REG3AQ06141 175 aa7.51□□□□□ -1.21
VCAN-212ENST00000515397 MIAQ16674 131 aa7.51□□□□□ -1.21
VCAN-212ENST00000515397 RAB4AP20338 218 aa7.5□□□□□ -1.21
VCAN-212ENST00000515397 PMCHP20382 165 aa7.5□□□□□ -1.21
VCAN-212ENST00000515397 FAM74A3Q4VXF1 159 aa7.5□□□□□ -1.21
VCAN-212ENST00000515397 TMEM191AQ9H0A3 160 aa7.5□□□□□ -1.21
VCAN-212ENST00000515397 A0A1B0GUV1 79 aa7.49□□□□□ -1.21
VCAN-212ENST00000515397 FAM231BA6NCW3 169 aa7.49□□□□□ -1.21
VCAN-212ENST00000515397 PRSS1P07477 247 aa7.49□□□□□ -1.21
VCAN-212ENST00000515397 CAMPP49913 170 aa7.49□□□□□ -1.21
VCAN-212ENST00000515397 RIGQ13278 110 aa7.49□□□□□ -1.21
VCAN-212ENST00000515397 Q5VSD8 79 aa7.49□□□□□ -1.21
VCAN-212ENST00000515397 RNASEKQ6P5S7 137 aaKnown RBP7.49□□□□□ -1.21
VCAN-212ENST00000515397 TMEM70Q9BUB7 260 aa7.49□□□□□ -1.21
VCAN-212ENST00000515397 AMMECR1LQ6DCA0 310 aa7.48□□□□□ -1.21
VCAN-212ENST00000515397 FRZBQ92765 325 aa7.48□□□□□ -1.21
VCAN-212ENST00000515397 ST20Q9HBF5 79 aa7.48□□□□□ -1.21
VCAN-212ENST00000515397 TMEM242Q9NWH2 141 aa7.48□□□□□ -1.21
VCAN-212ENST00000515397 NAT8BQ9UHF3 227 aa7.48□□□□□ -1.21
VCAN-212ENST00000515397 SRRM2Q9UQ35 2752 aaKnown RBP7.48□□□□□ -1.21
VCAN-212ENST00000515397 FLG2Q5D862 2391 aaPredicted RBP7.48□□□□□ -1.21
VCAN-212ENST00000515397 SMIM27A0A1W2PRY6 76 aa7.47□□□□□ -1.21
VCAN-212ENST00000515397 I3L3M4 83 aa7.47□□□□□ -1.21
VCAN-212ENST00000515397 TSHBP01222 138 aa7.47□□□□□ -1.21
VCAN-212ENST00000515397 APCSP02743 223 aa7.47□□□□□ -1.21
VCAN-212ENST00000515397 FGF6P10767 208 aa7.47□□□□□ -1.21
VCAN-212ENST00000515397 MRPL54Q6P161 138 aaKnown RBP7.47□□□□□ -1.21
VCAN-212ENST00000515397 VPS13BQ7Z7G8 4022 aa7.47□□□□□ -1.21
VCAN-212ENST00000515397 TRBV6-5A0A0K0K1A5 114 aa7.46□□□□□ -1.22
VCAN-212ENST00000515397 POLR2KP53803 58 aaKnown RBP7.46□□□□□ -1.22
VCAN-212ENST00000515397 MRPL51Q4U2R6 128 aaKnown RBP7.46□□□□□ -1.22
VCAN-212ENST00000515397 Q6ZSA8 131 aa7.46□□□□□ -1.22
VCAN-212ENST00000515397 GAGE12HA6NDE8 117 aa7.45□□□□□ -1.22
VCAN-212ENST00000515397 INAFM2P0DMQ5 153 aa7.45□□□□□ -1.22
VCAN-212ENST00000515397 C14orf177Q52M58 125 aa7.45□□□□□ -1.22
VCAN-212ENST00000515397 FAM104BQ5XKR9 115 aa7.45□□□□□ -1.22
VCAN-212ENST00000515397 NRACQ8N912 160 aa7.45□□□□□ -1.22
VCAN-212ENST00000515397 MRAP2Q96G30 205 aa7.45□□□□□ -1.22
VCAN-212ENST00000515397 SMDT1Q9H4I9 107 aa7.45□□□□□ -1.22
VCAN-212ENST00000515397 TRAV8-4A0A0B4J246 113 aa7.44□□□□□ -1.22
VCAN-212ENST00000515397 hDV102S1A0JD36 115 aa7.44□□□□□ -1.22
VCAN-212ENST00000515397 FAM229AH3BQW9 127 aa7.44□□□□□ -1.22
VCAN-212ENST00000515397 ESDP10768 282 aa7.44□□□□□ -1.22
VCAN-212ENST00000515397 RAB14P61106 215 aa7.44□□□□□ -1.22
VCAN-212ENST00000515397 SCXQ7RTU7 201 aa7.44□□□□□ -1.22
VCAN-212ENST00000515397 SLPIP03973 132 aa7.43□□□□□ -1.22
VCAN-212ENST00000515397 CHCHD10Q8WYQ3 142 aaPredicted RBP7.43□□□□□ -1.22
VCAN-212ENST00000515397 TRBV27A0A0K0K1C4 114 aa7.42□□□□□ -1.22
VCAN-212ENST00000515397 PANO1I0J062 215 aa7.42□□□□□ -1.22
VCAN-212ENST00000515397 VCYO14598 125 aa7.42□□□□□ -1.22
VCAN-212ENST00000515397 FCER1GP30273 86 aa7.42□□□□□ -1.22
VCAN-212ENST00000515397 CKS2P33552 79 aa7.42□□□□□ -1.22
VCAN-212ENST00000515397 SUMO2P61956 95 aaKnown RBP7.42□□□□□ -1.22
VCAN-212ENST00000515397 IFITM2Q01629 132 aa7.42□□□□□ -1.22
VCAN-212ENST00000515397 HIGD2BQ4VC39 106 aa7.42□□□□□ -1.22
VCAN-212ENST00000515397 RNASE13Q5GAN3 156 aaKnown RBP7.42□□□□□ -1.22
VCAN-212ENST00000515397 CIRBP-AS1Q8TBR5 109 aa7.42□□□□□ -1.22
VCAN-212ENST00000515397 CHAC1Q9BUX1 264 aa7.42□□□□□ -1.22
VCAN-212ENST00000515397 H7C423 109 aa7.41□□□□□ -1.22
VCAN-212ENST00000515397 XCL1P47992 114 aa7.41□□□□□ -1.22
VCAN-212ENST00000515397 LINC00528Q8N1L1 170 aa7.41□□□□□ -1.22
VCAN-212ENST00000515397 C9orf163Q8N9P6 203 aa7.41□□□□□ -1.22
VCAN-212ENST00000515397 OR5A1Q8NGJ0 315 aa7.41□□□□□ -1.22
VCAN-212ENST00000515397 TMEM101Q96IK0 257 aa7.41□□□□□ -1.22
VCAN-212ENST00000515397 BTF3L4Q96K17 158 aa7.41□□□□□ -1.22
VCAN-212ENST00000515397 A0A1B0GXF2 115 aa7.4□□□□□ -1.22
VCAN-212ENST00000515397 C7orf77A4D0Y5 90 aa7.4□□□□□ -1.22
VCAN-212ENST00000515397 D6R8Y8 96 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms