RNA–Protein interactions for RNA: ENST00000515266.1

MBD4-210, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 2

Gene MBD4, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-210ENST00000515266 DNAJC15Q9Y5T4 150 aa-0.63□□□□□ -2.51
MBD4-210ENST00000515266 IQSEC2Q5JU85 1478 aa-0.63□□□□□ -2.51
MBD4-210ENST00000515266 WDR7Q9Y4E6 1490 aa-0.63□□□□□ -2.51
MBD4-210ENST00000515266 ERCC6L2Q5T890 1561 aa-0.63□□□□□ -2.51
MBD4-210ENST00000515266 CCDC168Q8NDH2 2452 aa-0.63□□□□□ -2.51
MBD4-210ENST00000515266 MUC17Q685J3 4493 aa-0.64□□□□□ -2.51
MBD4-210ENST00000515266 LAMC1P11047 1609 aa-0.64□□□□□ -2.51
MBD4-210ENST00000515266 NRXN2Q9P2S2 1712 aa-0.64□□□□□ -2.51
MBD4-210ENST00000515266 EIF3AQ14152 1382 aaKnown RBP-0.64□□□□□ -2.51
MBD4-210ENST00000515266 A0A1W2PRE2 83 aa-0.64□□□□□ -2.51
MBD4-210ENST00000515266 A6NIN4 97 aa-0.64□□□□□ -2.51
MBD4-210ENST00000515266 HLA-DRB4P13762 266 aa-0.64□□□□□ -2.51
MBD4-210ENST00000515266 RPL7P18124 248 aaKnown RBP-0.64□□□□□ -2.51
MBD4-210ENST00000515266 OR9Q1Q8NGQ5 310 aa-0.64□□□□□ -2.51
MBD4-210ENST00000515266 CHMP6Q96FZ7 201 aa-0.64□□□□□ -2.51
MBD4-210ENST00000515266 CCDC115Q96NT0 180 aa-0.64□□□□□ -2.51
MBD4-210ENST00000515266 RPRMQ9NS64 109 aa-0.64□□□□□ -2.51
MBD4-210ENST00000515266 NDUFA12Q9UI09 145 aa-0.64□□□□□ -2.51
MBD4-210ENST00000515266 ATPIF1Q9UII2 106 aa-0.64□□□□□ -2.51
MBD4-210ENST00000515266 HLA-DRB4X5D2U9 266 aa-0.64□□□□□ -2.51
MBD4-210ENST00000515266 PARP14Q460N5 1801 aa-0.64□□□□□ -2.51
MBD4-210ENST00000515266 VPS13DQ5THJ4 4388 aa-0.64□□□□□ -2.51
MBD4-210ENST00000515266 PKD1P98161 4303 aa-0.65□□□□□ -2.51
MBD4-210ENST00000515266 DNAH7Q8WXX0 4024 aa-0.65□□□□□ -2.51
MBD4-210ENST00000515266 KDM3BQ7LBC6 1761 aa-0.65□□□□□ -2.51
MBD4-210ENST00000515266 PLXNB2O15031 1838 aa-0.65□□□□□ -2.51
MBD4-210ENST00000515266 TSC2P49815 1807 aa-0.65□□□□□ -2.51
MBD4-210ENST00000515266 ARFGEF1Q9Y6D6 1849 aa-0.65□□□□□ -2.51
MBD4-210ENST00000515266 DPM2O94777 84 aa-0.65□□□□□ -2.51
MBD4-210ENST00000515266 TNFP01375 233 aa-0.65□□□□□ -2.51
MBD4-210ENST00000515266 IFNA17P01571 189 aa-0.65□□□□□ -2.51
MBD4-210ENST00000515266 PAEPP09466 180 aa-0.65□□□□□ -2.51
MBD4-210ENST00000515266 UBE2D1P51668 147 aa-0.65□□□□□ -2.51
MBD4-210ENST00000515266 CLLU1Q5K131 121 aa-0.65□□□□□ -2.51
MBD4-210ENST00000515266 SPANXN1Q5VSR9 72 aa-0.65□□□□□ -2.51
MBD4-210ENST00000515266 LINC01545Q5VT33 79 aa-0.65□□□□□ -2.51
MBD4-210ENST00000515266 TRIQKQ629K1 86 aa-0.65□□□□□ -2.51
MBD4-210ENST00000515266 TMEM35BQ8NCS4 154 aa-0.65□□□□□ -2.51
MBD4-210ENST00000515266 SMIM4Q8WVI0 70 aa-0.65□□□□□ -2.51
MBD4-210ENST00000515266 MAGOHBQ96A72 148 aaKnown RBP-0.65□□□□□ -2.51
MBD4-210ENST00000515266 SDF2Q99470 211 aa-0.65□□□□□ -2.51
MBD4-210ENST00000515266 HOPXQ9BPY8 73 aaPredicted RBP-0.65□□□□□ -2.51
MBD4-210ENST00000515266 BANF2Q9H503 90 aa-0.65□□□□□ -2.51
MBD4-210ENST00000515266 GID8Q9NWU2 228 aa-0.65□□□□□ -2.51
MBD4-210ENST00000515266 LRP6O75581 1613 aa-0.65□□□□□ -2.51
MBD4-210ENST00000515266 ZCCHC11Q5TAX3 1644 aaKnown RBP-0.65□□□□□ -2.51
MBD4-210ENST00000515266 DNAH1Q9P2D7 4330 aa-0.65□□□□□ -2.51
MBD4-210ENST00000515266 DNAH9Q9NYC9 4486 aa-0.65□□□□□ -2.51
MBD4-210ENST00000515266 SYNMO15061 1565 aa-0.66□□□□□ -2.51
MBD4-210ENST00000515266 HTTP42858 3142 aa-0.66□□□□□ -2.51
MBD4-210ENST00000515266 IFT172Q9UG01 1749 aa-0.66□□□□□ -2.51
MBD4-210ENST00000515266 CLPSL1A2RUU4 121 aa-0.66□□□□□ -2.52
MBD4-210ENST00000515266 MT-ND4LP03901 98 aa-0.66□□□□□ -2.52
MBD4-210ENST00000515266 C9orf116Q5BN46 136 aaPredicted RBP-0.66□□□□□ -2.52
MBD4-210ENST00000515266 PPP1R2P3Q6NXS1 205 aa-0.66□□□□□ -2.52
MBD4-210ENST00000515266 C10orf82Q8WW14 230 aa-0.66□□□□□ -2.52
MBD4-210ENST00000515266 MAFIPQ8WZ33 124 aa-0.66□□□□□ -2.52
MBD4-210ENST00000515266 ACACAQ13085 2346 aa-0.66□□□□□ -2.52
MBD4-210ENST00000515266 BICRAQ9NZM4 1560 aa-0.66□□□□□ -2.52
MBD4-210ENST00000515266 ROCK1Q13464 1354 aa-0.67□□□□□ -2.52
MBD4-210ENST00000515266 SIPA1L3O60292 1781 aaPredicted RBP-0.67□□□□□ -2.52
MBD4-210ENST00000515266 CTXND1A0A1B0GTU2 59 aa-0.67□□□□□ -2.52
MBD4-210ENST00000515266 PIRTP0C851 137 aa-0.67□□□□□ -2.52
MBD4-210ENST00000515266 CCL18P55774 89 aa-0.67□□□□□ -2.52
MBD4-210ENST00000515266 DEFB135Q30KP9 77 aa-0.67□□□□□ -2.52
MBD4-210ENST00000515266 TMEM244Q5VVB8 128 aa-0.67□□□□□ -2.52
MBD4-210ENST00000515266 ZNF818PQ6ZRF7 136 aa-0.67□□□□□ -2.52
MBD4-210ENST00000515266 OR8I2Q8N0Y5 310 aa-0.67□□□□□ -2.52
MBD4-210ENST00000515266 MNS1Q8NEH6 495 aa-0.67□□□□□ -2.52
MBD4-210ENST00000515266 DEFB105AQ8NG35 78 aa-0.67□□□□□ -2.52
MBD4-210ENST00000515266 VSTM2AQ8TAG5 236 aa-0.67□□□□□ -2.52
MBD4-210ENST00000515266 AGPAT4-IT1Q9H0P7 198 aa-0.67□□□□□ -2.52
MBD4-210ENST00000515266 R4GMQ9 66 aa-0.67□□□□□ -2.52
MBD4-210ENST00000515266 OVOS2A0A0G2JMS6 1433 aa-0.67□□□□□ -2.52
MBD4-210ENST00000515266 CUBNO60494 3623 aa-0.67□□□□□ -2.52
MBD4-210ENST00000515266 KDM5CP41229 1560 aa-0.67□□□□□ -2.52
MBD4-210ENST00000515266 CHD7Q9P2D1 2997 aa-0.67□□□□□ -2.52
MBD4-210ENST00000515266 PAPPAQ13219 1627 aa-0.67□□□□□ -2.52
MBD4-210ENST00000515266 MYO9AB2RTY4 2548 aa-0.68□□□□□ -2.52
MBD4-210ENST00000515266 TLN1Q9Y490 2541 aaKnown RBP-0.68□□□□□ -2.52
MBD4-210ENST00000515266 DMXL2Q8TDJ6 3036 aa-0.68□□□□□ -2.52
MBD4-210ENST00000515266 TRBV20-1A0A075B6N2 111 aa-0.68□□□□□ -2.52
MBD4-210ENST00000515266 M0R135 149 aa-0.68□□□□□ -2.52
MBD4-210ENST00000515266 PPP1R17O96001 155 aa-0.68□□□□□ -2.52
MBD4-210ENST00000515266 UBE2G1P62253 170 aa-0.68□□□□□ -2.52
MBD4-210ENST00000515266 COX17Q14061 63 aa-0.68□□□□□ -2.52
MBD4-210ENST00000515266 TMEM128Q5BJH2 165 aa-0.68□□□□□ -2.52
MBD4-210ENST00000515266 TMEM170BQ5T4T1 132 aa-0.68□□□□□ -2.52
MBD4-210ENST00000515266 SAMD13Q5VXD3 122 aa-0.68□□□□□ -2.52
MBD4-210ENST00000515266 Q6JHZ5 121 aa-0.68□□□□□ -2.52
MBD4-210ENST00000515266 TOMM20LQ6UXN7 152 aa-0.68□□□□□ -2.52
MBD4-210ENST00000515266 CTAGE3PQ8IX95 158 aa-0.68□□□□□ -2.52
MBD4-210ENST00000515266 SPTSSBQ8NFR3 76 aa-0.68□□□□□ -2.52
MBD4-210ENST00000515266 PCBD2Q9H0N5 130 aa-0.68□□□□□ -2.52
MBD4-210ENST00000515266 LINC00472Q9H8W2 130 aa-0.68□□□□□ -2.52
MBD4-210ENST00000515266 LSM2Q9Y333 95 aaKnown RBP-0.68□□□□□ -2.52
MBD4-210ENST00000515266 KALRNO60229 2985 aa-0.68□□□□□ -2.52
MBD4-210ENST00000515266 TLN2Q9Y4G6 2542 aa-0.68□□□□□ -2.52
MBD4-210ENST00000515266 LRRC37A3O60309 1634 aa-0.68□□□□□ -2.52
MBD4-210ENST00000515266 UTP20O75691 2785 aaKnown RBP-0.68□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms