RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 LINC00588Q9Y4M8 146 aa8.23□□□□□ -1.09
PDLIM5-220ENST00000514830 IGHV3-38A0A0C4DH36 116 aa8.22□□□□□ -1.09
PDLIM5-220ENST00000514830 Q0VG73 95 aa8.22□□□□□ -1.09
PDLIM5-220ENST00000514830 TRBV25-1A0A075B6N4 114 aa8.21□□□□□ -1.1
PDLIM5-220ENST00000514830 IGHV1-24A0A0C4DH33 117 aa8.21□□□□□ -1.1
PDLIM5-220ENST00000514830 H7C423 109 aa8.21□□□□□ -1.1
PDLIM5-220ENST00000514830 ESDP10768 282 aa8.21□□□□□ -1.1
PDLIM5-220ENST00000514830 PKIAP61925 76 aa8.21□□□□□ -1.1
PDLIM5-220ENST00000514830 TRAV8-6A0A0B4J262 113 aa8.2□□□□□ -1.1
PDLIM5-220ENST00000514830 IFI27P40305 119 aaPredicted RBP8.2□□□□□ -1.1
PDLIM5-220ENST00000514830 CHCHD7Q9BUK0 85 aa8.2□□□□□ -1.1
PDLIM5-220ENST00000514830 LOC389332A0A1B0GUA5 103 aa8.19□□□□□ -1.1
PDLIM5-220ENST00000514830 K7EP13 123 aa8.19□□□□□ -1.1
PDLIM5-220ENST00000514830 FCER1GP30273 86 aa8.19□□□□□ -1.1
PDLIM5-220ENST00000514830 AMTP48728 403 aa8.19□□□□□ -1.1
PDLIM5-220ENST00000514830 RAB5BP61020 215 aa8.19□□□□□ -1.1
PDLIM5-220ENST00000514830 ORMDL2Q53FV1 153 aa8.19□□□□□ -1.1
PDLIM5-220ENST00000514830 PRSS3P2Q8NHM4 247 aa8.19□□□□□ -1.1
PDLIM5-220ENST00000514830 TMEM243Q9BU79 118 aa8.19□□□□□ -1.1
PDLIM5-220ENST00000514830 BIRC6Q9NR09 4857 aa8.19□□□□□ -1.1
PDLIM5-220ENST00000514830 LYSTQ99698 3801 aa8.18□□□□□ -1.1
PDLIM5-220ENST00000514830 HIST1H2BKO60814 126 aa8.18□□□□□ -1.1
PDLIM5-220ENST00000514830 HIST1H2BJP06899 126 aa8.18□□□□□ -1.1
PDLIM5-220ENST00000514830 DNAH10OSP0CZ25 163 aa8.18□□□□□ -1.1
PDLIM5-220ENST00000514830 HIST1H2BOP23527 126 aa8.18□□□□□ -1.1
PDLIM5-220ENST00000514830 G0S2P27469 103 aa8.18□□□□□ -1.1
PDLIM5-220ENST00000514830 HIST1H2BBP33778 126 aa8.18□□□□□ -1.1
PDLIM5-220ENST00000514830 HIST1H2BDP58876 126 aa8.18□□□□□ -1.1
PDLIM5-220ENST00000514830 HIST1H2BCP62807 126 aa8.18□□□□□ -1.1
PDLIM5-220ENST00000514830 LAGE3Q14657 143 aa8.18□□□□□ -1.1
PDLIM5-220ENST00000514830 HIST2H2BEQ16778 126 aa8.18□□□□□ -1.1
PDLIM5-220ENST00000514830 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.18□□□□□ -1.1
PDLIM5-220ENST00000514830 MRPL52Q86TS9 123 aaKnown RBP8.18□□□□□ -1.1
PDLIM5-220ENST00000514830 LINC00476Q8WZB0 136 aa8.18□□□□□ -1.1
PDLIM5-220ENST00000514830 HIST1H2BHQ93079 126 aa8.18□□□□□ -1.1
PDLIM5-220ENST00000514830 URB1-AS1Q96HZ7 61 aa8.18□□□□□ -1.1
PDLIM5-220ENST00000514830 HIST1H2BNQ99877 126 aa8.18□□□□□ -1.1
PDLIM5-220ENST00000514830 HIST1H2BMQ99879 126 aa8.18□□□□□ -1.1
PDLIM5-220ENST00000514830 ALMS1Q8TCU4 4167 aa8.17□□□□□ -1.1
PDLIM5-220ENST00000514830 VPS13DQ5THJ4 4388 aa8.17□□□□□ -1.1
PDLIM5-220ENST00000514830 A0A1B0GUV1 79 aa8.17□□□□□ -1.1
PDLIM5-220ENST00000514830 LINC01549A6NIU2 74 aa8.17□□□□□ -1.1
PDLIM5-220ENST00000514830 C1orf196B1AJZ1 125 aa8.17□□□□□ -1.1
PDLIM5-220ENST00000514830 LINC00614P0C842 121 aa8.17□□□□□ -1.1
PDLIM5-220ENST00000514830 LINC01556Q5JQF7 62 aa8.17□□□□□ -1.1
PDLIM5-220ENST00000514830 NIT1Q86X76 327 aa8.17□□□□□ -1.1
PDLIM5-220ENST00000514830 UBE2DNLQ8IWF7 75 aa8.17□□□□□ -1.1
PDLIM5-220ENST00000514830 C20orf203Q8NBC4 194 aa8.17□□□□□ -1.1
PDLIM5-220ENST00000514830 CHCHD1Q96BP2 118 aaKnown RBP8.17□□□□□ -1.1
PDLIM5-220ENST00000514830 TIMM21Q9BVV7 248 aa8.17□□□□□ -1.1
PDLIM5-220ENST00000514830 AP5S1Q9NUS5 200 aa8.17□□□□□ -1.1
PDLIM5-220ENST00000514830 CSDC2Q9Y534 153 aaKnown RBP8.17□□□□□ -1.1
PDLIM5-220ENST00000514830 SIVA1O15304 175 aa8.16□□□□□ -1.1
PDLIM5-220ENST00000514830 ZNF25P17030 456 aaPredicted RBP8.16□□□□□ -1.1
PDLIM5-220ENST00000514830 SMAGPQ0VAQ4 97 aa8.16□□□□□ -1.1
PDLIM5-220ENST00000514830 COA6Q5JTJ3 125 aaKnown RBP8.16□□□□□ -1.1
PDLIM5-220ENST00000514830 FA2HQ7L5A8 372 aa8.16□□□□□ -1.1
PDLIM5-220ENST00000514830 WFDC10BQ8IUB3 73 aa8.16□□□□□ -1.1
PDLIM5-220ENST00000514830 RYR2Q92736 4967 aa8.16□□□□□ -1.1
PDLIM5-220ENST00000514830 TMEM18Q96B42 140 aa8.16□□□□□ -1.1
PDLIM5-220ENST00000514830 CHCHD5Q9BSY4 110 aa8.16□□□□□ -1.1
PDLIM5-220ENST00000514830 Q9H8V8 135 aa8.16□□□□□ -1.1
PDLIM5-220ENST00000514830 NPSP0C0P6 89 aa8.15□□□□□ -1.1
PDLIM5-220ENST00000514830 PYGO1Q9Y3Y4 419 aa8.15□□□□□ -1.1
PDLIM5-220ENST00000514830 UBE2L6O14933 153 aa8.14□□□□□ -1.11
PDLIM5-220ENST00000514830 LINC00310P59036 64 aa8.14□□□□□ -1.11
PDLIM5-220ENST00000514830 BAGE3Q86Y29 109 aa8.14□□□□□ -1.11
PDLIM5-220ENST00000514830 CYSLTR1Q9Y271 337 aa8.14□□□□□ -1.11
PDLIM5-220ENST00000514830 DNAH1Q9P2D7 4330 aa8.14□□□□□ -1.11
PDLIM5-220ENST00000514830 A0A087WX48 190 aa8.13□□□□□ -1.11
PDLIM5-220ENST00000514830 FGF6P10767 208 aa8.13□□□□□ -1.11
PDLIM5-220ENST00000514830 BTF3P20290 206 aaKnown RBP8.13□□□□□ -1.11
PDLIM5-220ENST00000514830 C10orf126Q8N4M7 172 aa8.13□□□□□ -1.11
PDLIM5-220ENST00000514830 DEFB104AQ8WTQ1 72 aa8.13□□□□□ -1.11
PDLIM5-220ENST00000514830 TOMM6Q96B49 74 aa8.13□□□□□ -1.11
PDLIM5-220ENST00000514830 SPANXA1Q9NS26 97 aa8.13□□□□□ -1.11
PDLIM5-220ENST00000514830 UBE2D4Q9Y2X8 147 aa8.13□□□□□ -1.11
PDLIM5-220ENST00000514830 EPPK1P58107 5090 aaKnown RBP8.12□□□□□ -1.11
PDLIM5-220ENST00000514830 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.12□□□□□ -1.11
PDLIM5-220ENST00000514830 TRAV9-2A0A087WT02 112 aa8.12□□□□□ -1.11
PDLIM5-220ENST00000514830 A0A096LNJ9 63 aa8.12□□□□□ -1.11
PDLIM5-220ENST00000514830 IGKV2-29A2NJV5 120 aaPredicted RBP8.12□□□□□ -1.11
PDLIM5-220ENST00000514830 LY6G6CO95867 125 aa8.12□□□□□ -1.11
PDLIM5-220ENST00000514830 RBX1P62877 108 aa8.12□□□□□ -1.11
PDLIM5-220ENST00000514830 MRPS36P82909 103 aaKnown RBP8.12□□□□□ -1.11
PDLIM5-220ENST00000514830 GAGE6Q13070 117 aa8.12□□□□□ -1.11
PDLIM5-220ENST00000514830 MPV17L2Q567V2 206 aa8.12□□□□□ -1.11
PDLIM5-220ENST00000514830 TTC32Q5I0X7 151 aa8.12□□□□□ -1.11
PDLIM5-220ENST00000514830 RNASEKQ6P5S7 137 aaKnown RBP8.12□□□□□ -1.11
PDLIM5-220ENST00000514830 C2orf66Q6UXQ4 117 aa8.12□□□□□ -1.11
PDLIM5-220ENST00000514830 DNAH6Q9C0G6 4158 aa8.12□□□□□ -1.11
PDLIM5-220ENST00000514830 TMEM262E9PQX1 116 aa8.11□□□□□ -1.11
PDLIM5-220ENST00000514830 SERF1AO75920 110 aa8.11□□□□□ -1.11
PDLIM5-220ENST00000514830 HBDP02042 147 aa8.11□□□□□ -1.11
PDLIM5-220ENST00000514830 RPL39P62891 51 aaKnown RBP8.11□□□□□ -1.11
PDLIM5-220ENST00000514830 AMMECR1LQ6DCA0 310 aa8.11□□□□□ -1.11
PDLIM5-220ENST00000514830 TIMM17AQ99595 171 aa8.11□□□□□ -1.11
PDLIM5-220ENST00000514830 PRR34Q9NV39 138 aa8.11□□□□□ -1.11
PDLIM5-220ENST00000514830 NBDYA0A0U1RRE5 68 aa8.1□□□□□ -1.11
PDLIM5-220ENST00000514830 IGIPA6NJ69 53 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms